BAC Information

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BAC

Clone NameB6Ng01-299E10
Chromosome17 (Build37)
Map Location 11,174,285 - 11,175,449
singlet/doubletsinglet
Overlap genePark2
Upstream geneQk, LOC675815, Pacrg, LOC100041113
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-299E10.bB6Ng01-299E10.g
ACCGA094161GA094162
length1,1511,149
definitionB6Ng01-299E10.b B6Ng01-299E10.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatgccctgttttcttcagtgagccgttctctttataattagga
ctgagtgatttttaaacagcaatagaagtgtctgaatagctgcgtgttta
tatgaatgtagttattaagaatgcagttattcactttcattctttaatgt
tttgaataaatttcttaaattttatttagtttgttatagtctggaagctg
ggtgtatttttcagaaatctgtttgatcaaaattgagtctttccatttac
tatggtccggacacttaataaaatcttattccaatatgtgtctcttggat
gttgttaaagatggaaataattactaattaaaagcttttataaaagcaca
acaatcactagataactaggggaaatggcaggaaaggtctgaaactgcat
gtgaatgaaattcgccatcacacttggctctgtgtcagatccctccctct
tgttttgaccctaagaggttcgtttgacttgtgtgtgaataggtaaggtg
atagcagacgccagccaacctccttggcaacagtcttctagttgctgtct
gaggtctggggtcattcatgtgctgtgacacttgacatcacaacataaca
cacaggacaatgtttccagtctttagggacattctgaagcatacctccga
agtgtccttatttttacatatcatagacttcacatttaacatatacttag
atatgagtaggaggggcttagaacctgctctctgaaataggacctgcagt
agtgtttagcttcagcagggaacttaaatagtccccagggcagtccttaa
aggaaagactgacaagggtggtattattgtcactccagcacctcgtcctt
cagtcctccccgccccctggagttctcctgacagctttcagtgctgattt
cccttctggacaagttgggtttcacttcctgtttgtttctctgttgcaag
acatttctttataaatcctatgggttagagcctgatgtacacaagccaac
caagcagatcgtctacataaagatgatcttagtatatgatacatgtactg
ttgatacatatttatacataatctcaattgtgcactcatatacttcaggc
tccgagtaaccattagcactatcgctttgtgaagaacattggttaagtcc
t

gaattctccttaaaaagggacggggtttcgttttctctctctcttgcttc
ttgctctcttgcttcttgctctcttgcttcttacactcttgctcctgaag
atgtaagcaataaagttttgccgcagaagattctggtttgttgcgtcttt
cctggccggtcgtgagaacgcgtctaataacaattggtgccgaaacccgg
gacgagaaaaaactcgggacgagagtttaccatcaccggtacaaggaaga
tccctcattccagaaccagaactgcgggtcgcggtaataaaggttcccgt
aaagcagactgttaagaaggattcaactgtatgaattcagaacttttcag
ctggggaacgagagtaccagtgagtatagctttacgaggtaagcctgatc
ttgaactttctaaggaaattcaagacagtctatcagaagtaaagtggaat
atgtttggccttgaattttttctggtgttaggagcccttttgttcctttt
cacatgttatcaagtggttaaggcagggcggattctagatgaaattcagg
acaatctatcagaagtaaagcggggagagagagtaggagcaaagagaaaa
tatggtacacaaaataagtatacaggcctttccaagggtcttgaacccga
ggaaaagttaaggttaggtaggaatacctggagagagattagaaaaaaaa
gaggaaaaagggaaaagaagaaagatcaattagcggaggtctctaggaaa
aggagcctgtgctcatcgctggatgggctcggggagccagctcttagtag
ctctgaagcaggtgaagaatcctcctctgaggaaacagactgggaggaag
aagcagctcattatgagaaaaaagggtaccagccaggtaaagtgctagct
aatcagttaaggaagcccaaaagccggctggcgaagccagttttgctgat
tgggcctcaaggcagtcgcttcaaggtccgccctatgcggagtcccccgc
cctgcgtagtgcgtcagcagtgcgcagagagcagtacgcagaagaggcag
tgcgcagacttcaattcatttccccagagagcacaacgaaaatacaacag
catttcgtcttgaagaaccgaagggtgggccgtgtcaagctctccggta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_11174285_11175449
seq2: B6Ng01-299E10.b_46_1196

seq1  GAATTCCATGCCCTGTTTTCTTCAGTGAGCCGTTCTCTTTATAATTAGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGCCCTGTTTTCTTCAGTGAGCCGTTCTCTTTATAATTAGGA  50

seq1  CTGAGTGATTTTTAAACAGCAATAGAAGTGTCTGAATAGCTGCGTGTTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTGATTTTTAAACAGCAATAGAAGTGTCTGAATAGCTGCGTGTTTA  100

seq1  TATGAATGTAGTTATTAAGAATGCAGTTATTCACTTTCATTCTTTAATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAATGTAGTTATTAAGAATGCAGTTATTCACTTTCATTCTTTAATGT  150

seq1  TTTGAATAAATTTCTTAAATTTTATTTAGTTTGTTATAGTCTGGAAGCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAATAAATTTCTTAAATTTTATTTAGTTTGTTATAGTCTGGAAGCTG  200

seq1  GGTGTATTTTTCAGAAATCTGTTTGATCAAAATTGAGTCTTTCCATTTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTATTTTTCAGAAATCTGTTTGATCAAAATTGAGTCTTTCCATTTAC  250

seq1  TATGGTCCGGACACTTAATAAAATCTTATTCCAATATGTGTCTCTTGGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGTCCGGACACTTAATAAAATCTTATTCCAATATGTGTCTCTTGGAT  300

seq1  GTTGTTAAAGATGGAAATAATTACTAATTAAAAGCTTTTATAAAAGCACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTAAAGATGGAAATAATTACTAATTAAAAGCTTTTATAAAAGCACA  350

seq1  ACAATCACTAGATAACTAGGGGAAATGGCAGGAAAGGTCTGAAACTGCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATCACTAGATAACTAGGGGAAATGGCAGGAAAGGTCTGAAACTGCAT  400

seq1  GTGAATGAAATTCGCCATCACACTTGGCTCTGTGTCAGATCCCTCCCTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATGAAATTCGCCATCACACTTGGCTCTGTGTCAGATCCCTCCCTCT  450

seq1  TGTTTTGACCCTAAGAGGTTCGTTTGACTTGTGTGTGAATAGGTAAGGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTGACCCTAAGAGGTTCGTTTGACTTGTGTGTGAATAGGTAAGGTG  500

seq1  ATAGCAGACGCCAGCCAACCTCCTTGGCAACAGTCTTCTAGTTGCTGTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCAGACGCCAGCCAACCTCCTTGGCAACAGTCTTCTAGTTGCTGTCT  550

seq1  GAGGTCTGGGGTCATTCATGTGCTGTGACACTTGACATCACAACATAACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTCTGGGGTCATTCATGTGCTGTGACACTTGACATCACAACATAACA  600

seq1  CACAGGACAATGTTTCCAGTCTTTAGGGACATTCTGAAGCATACCTCCGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGACAATGTTTCCAGTCTTTAGGGACATTCTGAAGCATACCTCCGA  650

seq1  AGTGTCCTTATTTTTACATATCATAGACTTCACATTTAACATATACTTAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTCCTTATTTTTACATATCATAGACTTCACATTTAACATATACTTAG  700

seq1  ATATGAGTAGGAGGGGCTTAGAACCTGCTCTCTGAAATAGGACCTGCAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGAGTAGGAGGGGCTTAGAACCTGCTCTCTGAAATAGGACCTGCAGT  750

seq1  AGTGTTTAGCTTCAGCAGGGAACTTAAATAGTCCCCAGGGCAGTCCTT-A  799
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  AGTGTTTAGCTTCAGCAGGGAACTTAAATAGTCCCCAGGGCAGTCCTTAA  800

seq1  AGGAAAGACTGACAAGGGTGGTATTATTGTCACTCCAGCACCTCGTCCTT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAGACTGACAAGGGTGGTATTATTGTCACTCCAGCACCTCGTCCTT  850

seq1  CAGTCCTCCCCGCCCCCTGGAGTTCTCCTGACAGCTTTCAGTGCTGATTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCCTCCCCGCCCCCTGGAGTTCTCCTGACAGCTTTCAGTGCTGATTT  900

seq1  CCCTTCTGGACAAGTTGGGTTTCACTTCCTGTTTGTTTCTCTGTTGCAAG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTCTGGACAAGTTGGGTTTCACTTCCTGTTTGTTTCTCTGTTGCAAG  950

seq1  AACATTTCTTTATAAATCCTATGGGTTAGAGCCTGATTGTTACACAAGCC  999
       ||||||||||||||||||||||||||||||||||||   ||||||||||
seq2  -ACATTTCTTTATAAATCCTATGGGTTAGAGCCTGAT--GTACACAAGCC  997

seq1  AACCAAAGCAGATTCGTCCTACATAAAGATTGATCTTAGTATAATGATAC  1049
      |||| ||||||| |||| ||||||||||| |||||||||||| |||||||
seq2  AACC-AAGCAGA-TCGT-CTACATAAAGA-TGATCTTAGTAT-ATGATAC  1042

seq1  ATTGTACTTGTTTGATTACATA-TTATACATAATTCTC-ATTGTGCACTT  1097
      | ||||||   |||| |||||| |||||||||| |||| ||||||||| |
seq2  A-TGTACT--GTTGA-TACATATTTATACATAA-TCTCAATTGTGCAC-T  1086

seq1  CATATTACCTTCAGCTCCCGAGTAACC-TTAGCCCACCTATCGTCTTTGT  1146
      |||||   ||||||   |||||||||| |||||    |||||| ||||||
seq2  CATAT--ACTTCAGGCTCCGAGTAACCATTAGC---ACTATCG-CTTTGT  1130

seq1  GAAG-ACATT-GTTAAGTCCT  1165
      |||| ||||| ||||||||||
seq2  GAAGAACATTGGTTAAGTCCT  1151


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