MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-299N20
Chromosome	17 (Build37)
Map Location	11,994,434 - 12,174,852
singlet/doublet	doublet
Overlap gene	Park2
Upstream gene	Pacrg, LOC100041113
Downstream gene	Agpat4, Tdgf1-ps2, Map3k4, 4732491K20Rik, LOC625753, Plg, Slc22a3, LOC100041192, Slc22a2, Slc22a1, Igf2r, Air, EG635617, Mas1, Mrgprh, Pnldc1, Mrpl18, Tcp1, Acat3, Acat2, Wtap
Link	Open Mouse BAC browser

Click to get alignment info.

name	Pacrg (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69310 MGI:1916560
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Park2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:50873 MGI:1355296
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041113 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041113
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	Agpat4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68262 MGI:1915512
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tdgf1-ps2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21669 MGI:107366
definition	gene_synonym : Tdgf3 note : teratocarcinoma-derived growth factor, pseudogene 2 pseudo : _no_value

name	Map3k4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:26407 MGI:1346875
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4732491K20Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:224523 MGI:3026975
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 16 ESTs

name	LOC625753 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:625753
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Plg (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18815 MGI:97620
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc22a3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20519 MGI:1333817
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041192 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041192
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 23 ESTs, 1 Protein pseudo : _no_value

name	Slc22a2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20518 MGI:1335072
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc22a1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20517 MGI:108111
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Igf2r (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16004 MGI:96435
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Air (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:104103 MGI:1353471
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG635617 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:635617 MGI:3645097
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 6 Proteins pseudo : _no_value

name	Mas1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17171 MGI:96918
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mrgprh (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:80978 MGI:1934134
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pnldc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:240023 MGI:2685159
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 ESTs, 2 Proteins

name	Mrpl18 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67681 MGI:1914931
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tcp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21454 MGI:98535
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Acat3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:224530 MGI:109182
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Acat2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:110460 MGI:87871
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Wtap (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:60532 MGI:1926395
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pacrg (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:117676372 GeneID:69310 MGI:1916560
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Park2 co-regulated transcript_id : NM_027032.2

name	Park2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131140 GeneID:50873 MGI:1355296
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : parkin transcript_id : NM_016694.3

name	Agpat4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802840 GeneID:68262 MGI:1915512
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : 1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta) transcript_id : NM_026644.2

name	Map3k4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:93102420 GeneID:26407 MGI:1346875
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mitogen activated protein kinase kinase kinase 4 transcript_id : NM_011948.2

name	4732491K20Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94401588 GeneID:224523 MGI:3026975
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 16 ESTs product : RIKEN cDNA 4732491K20 gene transcript_id : XM_488795.3

name	Plg (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982112 GeneID:18815 MGI:97620
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : plasminogen transcript_id : NM_008877.2

name	Slc22a3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892398 GeneID:20519 MGI:1333817
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 22 (organic cation transporter), member 3 transcript_id : NM_011395.2

name	Slc22a2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130849 GeneID:20518 MGI:1335072
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 22 (organic cation transporter), member 2 transcript_id : NM_013667.2

name	Slc22a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142370695 GeneID:20517 MGI:108111
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 22 (organic cation transporter), member 1 transcript_id : NM_009202.3

name	Igf2r (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133778977 GeneID:16004 MGI:96435
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : insulin-like growth factor 2 receptor transcript_id : NM_010515.2

name	Mas1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142371805 GeneID:17171 MGI:96918
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : MAS1 oncogene transcript_id : NM_008552.3

name	Mrgprh (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:13507681 GeneID:80978 MGI:1934134
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : MAS-related GPR, member H transcript_id : NM_030726.1

name	Pnldc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149268416 GeneID:240023 MGI:2685159
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 ESTs, 2 Proteins product : poly(A)-specific ribonuclease (PARN)-like domain containing 1 transcript_id : XM_139740.8

name	Mrpl18 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142343757 GeneID:67681 MGI:1914931
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mitochondrial ribosomal protein L18 transcript_id : NM_026310.2

name	Tcp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802409 GeneID:21454 MGI:98535
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : t-complex protein 1 transcript_id : NM_013686.3

name	Acat3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:112181180 GeneID:224530 MGI:109182
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : acetyl-Coenzyme A acetyltransferase 3 transcript_id : NM_153151.3

name	Acat2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142347821 GeneID:110460 MGI:87871
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : acetyl-Coenzyme A acetyltransferase 2 transcript_id : NM_009338.2

name	Wtap (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33946270 GeneID:60532 MGI:1926395
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Wilms' tumour 1-associating protein transcript_id : NM_175394.1

name	Pacrg (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:66392180 CCDS:CCDS28388.1 GeneID:69310 MGI:1916560
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : parkin co-regulated gene protein protein_id : NP_081308.1

name	Park2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7710078 GeneID:50873 MGI:1355296
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0043005 - neuron projection [Evidence IDA] GO_function : GO:0016874 - ligase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0042417 - dopamine metabolism [Evidence IMP]; GO:0051583 - dopamine uptake [Evidence IMP]; GO:0007612 - learning [Evidence IMP]; GO:0007626 - locomotory behavior [Evidence IMP]; GO:0042415 - norepinephrine metabolism [Evidence IMP]; GO:0019538 - protein metabolism [Evidence IMP]; GO:0006464 - protein modification [Evidence IEA]; GO:0046928 - regulation of neurotransmitter secretion [Evidence IMP]; GO:0050804 - regulation of synaptic transmission [Evidence IMP]; GO:0001964 - startle response [Evidence IMP]; GO:0001963 - synaptic transmission, dopaminergic [Evidence IMP]; GO:0035249 - synaptic transmission, glutamatergic [Evidence IMP] codon_start : 1 note : parkin protein; Partial coding sequence representing amino acids 206-243; Homologous to GI:7710078. Partial coding sequence amino acids 58-178 product : parkin protein_id : NP_057903.1

name	Agpat4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27229064 CCDS:CCDS28389.1 GeneID:68262 MGI:1915512
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008415 - acyltransferase activity [Evidence IEA] GO_process : GO:0008152 - metabolism [Evidence IEA]; GO:0008654 - phospholipid biosynthesis [Evidence IEA] codon_start : 1 note : lysophosphatidic acid acyltransferase-delta; 1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, delta) product : 1-acylglycerol-3-phosphate O-acyltransferase 4 protein_id : NP_080920.2

name	Map3k4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:93102421 GeneID:26407 MGI:1346875
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 note : MEK kinase 4 product : mitogen activated protein kinase kinase kinase 4 protein_id : NP_036078.2

name	4732491K20Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51769961 GeneID:224523 MGI:3026975
definition	codon_start : 1 product : hypothetical protein protein_id : XP_488795.1

name	Plg (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982113 CCDS:CCDS28390.1 GeneID:18815 MGI:97620
definition	GO_component : GO:0005615 - extracellular space [Evidence ISS] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0004283 - plasmin activity [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence IDA]; GO:0007596 - blood coagulation [Evidence IEA]; GO:0042730 - fibrinolysis [Evidence IEA]; GO:0006917 - induction of apoptosis [Evidence IDA]; GO:0046716 - muscle maintenance [Evidence IMP]; GO:0045445 - myoblast differentiation [Evidence IMP]; GO:0016525 - negative regulation of angiogenesis [Evidence TAS]; GO:0043537 - negative regulation of blood vessel endothelial cell migration [Evidence ISS]; GO:0050874 - organismal physiological process [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]; GO:0009888 - tissue development [Evidence IEA]; GO:0042246 - tissue regeneration [Evidence IMP] codon_start : 1 exception : mismatches in translation product : plasminogen protein_id : NP_032903.2

name	Slc22a3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755538 CCDS:CCDS28391.1 GeneID:20519 MGI:1333817
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence TAS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0015075 - ion transporter activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0015101 - organic cation transporter activity [Evidence ISS]; GO:0031402 - sodium ion binding [Evidence IEA]; GO:0015293 - symporter activity [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0015695 - organic cation transport [Evidence ISS]; GO:0006814 - sodium ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : solute carrier family 22, member 3; organic cation transporter 3 product : solute carrier family 22 (organic cation transporter), member 3 protein_id : NP_035525.1

name	Slc22a2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305499 CCDS:CCDS28392.1 GeneID:20518 MGI:1335072
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence ISS] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0015101 - organic cation transporter activity [Evidence ISS] [Evidence IDA]; GO:0031402 - sodium ion binding [Evidence IEA]; GO:0015293 - symporter activity [Evidence IEA] GO_process : GO:0006812 - cation transport [Evidence IDA]; GO:0015695 - organic cation transport [Evidence ISS]; GO:0006814 - sodium ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : solute carrier family 22, member 2; organic cation transporter 2 product : solute carrier family 22 member 2 protein_id : NP_038695.1

name	Slc22a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982010 CCDS:CCDS28393.1 GeneID:20517 MGI:108111
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence ISS] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0015101 - organic cation transporter activity [Evidence IDA]; GO:0031402 - sodium ion binding [Evidence IEA]; GO:0015293 - symporter activity [Evidence IEA] GO_process : GO:0006812 - cation transport [Evidence IDA]; GO:0006814 - sodium ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : solute carrier family 22, member 1 product : solute carrier family 22 member 1 protein_id : NP_033228.2

name	Igf2r (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:133778978 GeneID:16004 MGI:96435
definition	GO_component : GO:0005768 - endosome [Evidence ISS]; GO:0005764 - lysosome [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005641 - nuclear envelope lumen [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA]; GO:0030140 - trans-Golgi network transport vesicle [Evidence ISS] GO_function : GO:0005520 - insulin-like growth factor binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 note : IGF-II/CI-MPR; cation-independent MPR; cation-independent mannose 6-phosphate receptor; mannose-6-phosphate receptor, cation independent product : insulin-like growth factor 2 receptor protein_id : NP_034645.2

name	Mas1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543241 CCDS:CCDS28394.1 GeneID:17171 MGI:96918
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0050875 - cellular physiological process [Evidence IEA]; GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0000074 - regulation of progression through cell cycle [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : MAS1 oncogene protein_id : NP_032578.2

name	Mrgprh (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13507682 CCDS:CCDS28395.1 GeneID:80978 MGI:1934134
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : G-protein coupled receptor GPR90; G protein-coupled receptor 90 product : MAS-related GPR, member H protein_id : NP_109651.1

name	Pnldc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149268417 GeneID:240023 MGI:2685159
definition	codon_start : 1 product : poly(A)-specific ribonuclease (PARN)-like domain containing 1 protein_id : XP_139740.6

name	Mrpl18 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385808 CCDS:CCDS28396.1 GeneID:67681 MGI:1914931
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA]; GO:0005840 - ribosome [Evidence IEA] GO_function : GO:0003735 - structural constituent of ribosome [Evidence IEA] GO_process : GO:0006412 - protein biosynthesis [Evidence IEA] codon_start : 1 product : mitochondrial ribosomal protein L18 protein_id : NP_080586.1

name	Tcp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110625624 CCDS:CCDS28397.1 GeneID:21454 MGI:98535
definition	GO_component : GO:0005832 - chaperonin-containing T-complex [Evidence IDA]; GO:0005815 - microtubule organizing center [Evidence IDA]; GO:0005720 - nuclear heterochromatin [Evidence IDA]; GO:0000242 - pericentriolar material [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA] GO_process : GO:0044267 - cellular protein metabolism [Evidence IEA]; GO:0006457 - protein folding [Evidence IEA] codon_start : 1 note : snoRNA MBI-39; snoRNA MBI-125; t-complex polypeptide 1 product : t-complex protein 1 protein_id : NP_038714.2

name	Acat3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110625948 CCDS:CCDS28398.1 GeneID:224530 MGI:109182
definition	GO_function : GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 note : acetyl CoA transferase-like product : acetyl-Coenzyme A acetyltransferase 3 protein_id : NP_694791.2

name	Acat2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30348956 GeneID:110460 MGI:87871
definition	GO_function : GO:0003985 - acetyl-CoA C-acetyltransferase activity [Evidence IEA]; GO:0008415 - acyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 exception : mismatches in translation note : t-complex protein 1, related sequence 1 product : acetyl-Coenzyme A acetyltransferase 2 protein_id : NP_033364.1

name	Wtap (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33946271 GeneID:60532 MGI:1926395
definition	GO_component : GO:0005654 - nucleoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IEA] codon_start : 1 product : Wilms' tumour 1-associating protein protein_id : NP_780603.1

name	LOC100041113 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041113
definition	number : 1 pseudo : _no_value

name	LOC625753 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:625753
definition	number : 1 pseudo : _no_value

name	LOC100041192 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149268415 GeneID:100041192
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 23 ESTs, 1 Protein product : similar to NADH dehydrogenase (ubiquinone) 1 beta subcomplex 3 pseudo : _no_value transcript_id : XR_033029.1

name	Air (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:84872146 GeneID:104103 MGI:1353471
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : antisense Igf2r RNA transcript_id : NR_002853.1

name	EG635617 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:94401589 GeneID:635617 MGI:3645097
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 6 Proteins product : predicted gene, EG635617 pseudo : _no_value transcript_id : XR_002006.1

clone name	MSMg01-300D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-125A02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-442I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-109E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-292E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-367A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455I07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-385A14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-232A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-477F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-540E19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-186C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-401O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-494H09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539J07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-349C16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-457N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316N19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-521B02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-394D03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-460F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-263A04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-101N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-479K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430P09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-212G11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516L12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-071C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538J13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-096B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-301K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-092N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475I12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-292A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-291K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-471C07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-378F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-399H14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-320H16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-166L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-318K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-156H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-153O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-191J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-294A16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-169J16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-069I15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435D14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-120J17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-301I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-313D12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111F12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-363B16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-476H12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-470M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-167H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-112J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-385P13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-173I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-513A04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452N01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-543L23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-404K24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-171H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-527H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373K15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-519P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462G07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-532D12
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-196F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-342F12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-137N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-150A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-491N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-275J09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-073D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-131K11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-477N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-525L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-537M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-306M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-118I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128N13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-088H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167F03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291J16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-246M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343F10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-139H05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012I21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138C07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-236J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296O21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325L12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-262K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327D19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-328A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205D17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-292H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250G17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208K15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084C23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216E18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023B01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-246E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219J06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015O13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-186K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214O10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-219J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094H12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-288G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-252F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298K23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270O07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263A24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330C18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-228D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346E15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-327G05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137D11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-321K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049M15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-102I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002B16
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-299N20.b	B6Ng01-299N20.g
ACC	GA094590	GA094591
length	173	992
definition	B6Ng01-299N20.b	B6Ng01-299N20.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(11,994,434 - 11,994,606)	(12,173,870 - 12,174,852)
sequence	acagggtacagcagtttcagtggctccagcttattagaaaatctcaccta atttggtaatctgggtgaggcaaatctaggttctttgatattaatcttaa ttactaatattaactttcatatggtgagtacagtgtgtgtgtctatgtgt gtgtggtatgtgtgtatgtatgt	gaattccttagggacacatatgtcccctctgtctgtcagattgcggaggc aaggaagctcaagaaacaatcacataggcggaggtgtggctaccagctgg tggggctgtctgtcactcagataggctccacggagctctggcaatgtgtc aggttaccctgtaagagactgcaactgagctgggtggggtcgtatattga caaggatggcaaataataccattaggcttccatttaaacccagatctcac gtcagcactggaacacggactaagggatgtcactgaacctctctacccgt ctttccatcgtgtctgcattgagcaaatacccattttcaaactctcatta ttaacttgcctttttcacttctggtgaggacaggaggctgaatctgacgc ttagggcttggaaaggtggctggcactgttgacgtgctggccactgcctt ccaggttctctatggcttttaggcgtcgtgtggcctgcagtcctttatta ctttatttactcaagacttaaaatataaatatgaagtaatgaaaatgggg cttaaaaggaaagtacttttctaagaattacgccaatggtagttgttagt ggttcgtaactatggatatgtatgggcaagaaatggaacttgcaataaat gaggaacgtggggcccaggaaggggccgtaccacactgttctgcgattgc ttgctgtctgagaggccatgagatgggatgggggttgcttcattctaaga taatgttattataaaagggacttttttaataacagcttgacaagaaaagg ggaaaggctcattttttcttcccagtgaaaaataaaatcagaaatgtaaa aattaggccataggataatgaccaccattctgcaagatgaatttacttca gcaaaattatggcacatccttcattatggactgctattatcacagcctta gagaaattgttaaactttgtatgtgatatttatcaagtgggt
quality values	Open. Hide. 19 39 43 62 59 62 62 49 51 36 59 62 59 59 59 62 62 49 22 49 59 62 59 56 62 59 59 22 40 59 59 56 43 49 62 59 49 62 62 62 49 49 62 59 59 59 62 62 62 62 62 62 62 59 62 59 39 62 59 59 62 59 62 62 59 59 54 62 62 59 59 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 59 59 51 62 59 54 62 62 59 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 59 59 62 62 62 62 62 62 59 62 62 62 62 59 59 59 59 59 62 62 62 62 59 62 49 49 59 59 59 59 59 62 59 62 62 59 59 59 59 59 59 62 62 59 59 62 62 24 25 16	Open. Hide. 62 47 35 47 62 62 62 62 62 62 47 62 56 24 51 25 56 26 32 26 56 56 62 62 62 62 49 62 62 62 62 62 62 62 62 62 59 59 62 59 62 62 62 62 62 62 59 59 62 62 62 62 62 43 35 62 62 59 62 62 59 38 46 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 54 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 54 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 59 62 62 49 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 59 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 49 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 43 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 42 62 62 62 62 62 62 62 62 62 62 54 46 58 58 58 58 54 54 58 52 58 58 58 58 52 47 54 54 54 58 58 54 52 54 58 54 52 54 58 58 41 58 54 58 52 58 58 52 58 58 58 58 54 58 58 58 58 58 54 54 58 58 58 54 54 54 58 42 58 58 58 58 54 54 58 58 54 58 52 58 54 52 58 54 58 46 58 58 58 58 52 54 52 51 58 58 58 58 49 47 46 58 39 58 53 53 52 50 46 49 58 42 19 58 54 58 58 50 58 46 53 58 58 52 52 53 52 58 58 49 47 50 53 50 49 51 50 52 53 53 51 58 48 58 52 41 39 58 53 39 53 51 58 54 50 58 58 39 58 58 41 46 58 50 51 52 41 58 58 51 39 36 50 52 53 58 42 50 51 58 16 37 46 41 39 49 52 49 58 58 51 25 43 26 31 27 52 54 46 18 58 58 37 46 49 50 50 33 39 51 32 38 39 50 39 39 50 15 43 29 28 33 21 47 26 30 39 42 52 37 44 38 53 51 42 45 49 40 32 11 46 20 38 17 49 32 49 49 46 30 39 26 33 49 29 28 29 24 54 54 54 54 34 38 34 40 53 37 26 32 47 54 53 33 37 35 27 46 28 27 49 32 52 26 35 32 39 31 37 52 37 54 44 18 23 54 33 25 17 11 54 54 53 53 33 18 26 21 34 27 40 31 34 32 33 31 34 31 30 29 27 32 46 52 47 36 8 40 40 18 31 47 45 35 33 32 39 27 15 38 52 41 40 40 7 8 18 30 26 37 25 14 9 9 17 30 46 46 46 32 31 31 51 45 31 38 34 17 7 32 51 31 31 30 31 32 45 45 51 38 24 28 18 6 40 23 19 9 9 22 34 31 21 17 27 32 30 31 30 22 24 21 21 25 28 31 34 30 26 31 31 21 16 20 33 14 25 23 33 9 39 27 31 38 34 31 28 16 19 31 16 30 37 10 27 8 25 11 19 28 12 11 30 30 31 30 37 14 19 30 19 21 44 36 26 33 25 26 10 13 37 20 15 16 18 26 18 5 20 25 28 32 14 13 31 21 16 7 6 24 7 33 41 10 6 7 20 6 9 21 38 24 10 6 30 27 37 12 9 10 14 12 10 29 13 6 6 31 19 21 14 19 13 23 10 12 12 9 9 6

Alignment Information

BAC End 1

BAC End 2

seq1: chr17_11994434_11994606
seq2: B6Ng01-299N20.b_51_223

seq1  ACAGGGTACAGCAGTTTCAGTGGCTCCAGCTTATTAGAAAATCTCACCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGTACAGCAGTTTCAGTGGCTCCAGCTTATTAGAAAATCTCACCTA  50

seq1  ATTTGGTAATCTGGGTGAGGCAAATCTAGGTTCTTTGATATTAATCTTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGTAATCTGGGTGAGGCAAATCTAGGTTCTTTGATATTAATCTTAA  100

seq1  TTACTAATATTAACTTTCATATGGTGAGTACAGTGTGTGTGTCTATGTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTAATATTAACTTTCATATGGTGAGTACAGTGTGTGTGTCTATGTGT  150

seq1  GTGTGGTATGTGTGTATGTATGT  173
      |||||||||||||||||||||||
seq2  GTGTGGTATGTGTGTATGTATGT  173

seq1: chr17_12173870_12174852
seq2: B6Ng01-299N20.g_69_1060 (reverse)

seq1  ACCCACTTGAT-AATATCACATAC-AAGTTTA--CATTTCTCTAAGGCTG  46
      ||||||||||| |||||||||||| |||||||   |||||||||||||||
seq2  ACCCACTTGATAAATATCACATACAAAGTTTAACAATTTCTCTAAGGCTG  50

seq1  TGATTAATAGCAGTCCATAATG-AGGATGTGCCATAA-TTTGCTGAAGT-  93
      ||| |||||||||||||||||| |||||||||||||| ||||||||||| 
seq2  TGA-TAATAGCAGTCCATAATGAAGGATGTGCCATAATTTTGCTGAAGTA  99

seq1  AATTCATCTTGCAGAATGGTGGTCATTATCCTATGGCCTAATTTTTACAT  143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCATCTTGCAGAATGGTGGTCATTATCCTATGGCCTAATTTTTACAT  149

seq1  TTCTGATTTTATTTTTCACTGGGAAG-AAAAATGAGCCTTT-CCCTTTTC  191
      |||||||||||||||||||||||||| |||||||||||||| ||||||||
seq2  TTCTGATTTTATTTTTCACTGGGAAGAAAAAATGAGCCTTTCCCCTTTTC  199

seq1  TTGTCAAGCTGTTATT-AAAAAGTCCCTTTTATAATAACATTATCTTAGA  240
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TTGTCAAGCTGTTATTAAAAAAGTCCCTTTTATAATAACATTATCTTAGA  249

seq1  ATGAAGCAACCCCCATCCCATCTCATGGCCTCTCAGACAGCAAGCAATCG  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGCAACCCCCATCCCATCTCATGGCCTCTCAGACAGCAAGCAATCG  299

seq1  CAGAACAGTGTGGTACGGCCCCTTCCTGGGCCCCACGTTCCTCATTTATT  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAACAGTGTGGTACGGCCCCTTCCTGGGCCCCACGTTCCTCATTTATT  349

seq1  GCAAGTTCCATTTCTTGCCCATACATATCCATAGTTACGAACCACTAACA  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGTTCCATTTCTTGCCCATACATATCCATAGTTACGAACCACTAACA  399

seq1  ACTACCATTGGCGTAATTCTTAGAAAAGTACTTTCCTTTTAAGCCCCATT  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACCATTGGCGTAATTCTTAGAAAAGTACTTTCCTTTTAAGCCCCATT  449

seq1  TTCATTACTTCATATTTATATTTTAAGTCTTGAGTAAATAAAGTAATAAA  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTACTTCATATTTATATTTTAAGTCTTGAGTAAATAAAGTAATAAA  499

seq1  GGACTGCAGGCCACACGACGCCTAAAAGCCATAGAGAACCTGGAAGGCAG  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTGCAGGCCACACGACGCCTAAAAGCCATAGAGAACCTGGAAGGCAG  549

seq1  TGGCCAGCACGTCAACAGTGCCAGCCACCTTTCCAAGCCCTAAGCGTCAG  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCAGCACGTCAACAGTGCCAGCCACCTTTCCAAGCCCTAAGCGTCAG  599

seq1  ATTCAGCCTCCTGTCCTCACCAGAAGTGAAAAAGGCAAGTTAATAATGAG  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGCCTCCTGTCCTCACCAGAAGTGAAAAAGGCAAGTTAATAATGAG  649

seq1  AGTTTGAAAATGGGTATTTGCTCAATGCAGACACGATGGAAAGACGGGTA  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGAAAATGGGTATTTGCTCAATGCAGACACGATGGAAAGACGGGTA  699

seq1  GAGAGGTTCAGTGACATCCCTTAGTCCGTGTTCCAGTGCTGACGTGAGAT  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGTTCAGTGACATCCCTTAGTCCGTGTTCCAGTGCTGACGTGAGAT  749

seq1  CTGGGTTTAAATGGAAGCCTAATGGTATTATTTGCCATCCTTGTCAATAT  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTTTAAATGGAAGCCTAATGGTATTATTTGCCATCCTTGTCAATAT  799

seq1  ACGACCCCACCCAGCTCAGTTGCAGTCTCTTACAGGGTAACCTGACACAT  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGACCCCACCCAGCTCAGTTGCAGTCTCTTACAGGGTAACCTGACACAT  849

seq1  TGCCAGAGCTCCGTGGAGCCTATCTGAGTGACAGACAGCCCCACCAGCTG  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAGAGCTCCGTGGAGCCTATCTGAGTGACAGACAGCCCCACCAGCTG  899

seq1  GTAGCCACACCTCCGCCTATGTGATTGTTTCTTGAGCTTCCTTGCCTCCG  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCCACACCTCCGCCTATGTGATTGTTTCTTGAGCTTCCTTGCCTCCG  949

seq1  CAATCTGACAGACAGAGGGGACATATGTGTCCCTAAGGAATTC  983
      |||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCTGACAGACAGAGGGGACATATGTGTCCCTAAGGAATTC  992

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information