BAC Information

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BAC

Clone NameB6Ng01-301L05
Chromosome17 (Build37)
Map Location 37,595,589 - 37,596,751
singlet/doubletsinglet
Overlap genenone
Upstream geneH2-M10.4, H2-M11, LOC667896, H2-M9, LOC620340, H2-M1, LOC667912, LOC100043158, LOC667915, H2-M10.5, H2-M10.6, Trim26, Trim15, Trim10, LOC100043164, Trim40, Trim31, Ppp1r11, Znrd1, 1700022C21Rik, H2-M6-ps, 2410137M14Rik, H2-M4-ps, D130003B22Rik, Zfp57, Mog, Gabbr1, Olfr90, Olfr91, Olfr92, EG224763, LOC667973, Olfr93, Olfr753-ps1, LOC630355, Ubd, Olfr94, Olfr95, Olfr96, Olfr97, Olfr754-ps1, Olfr98, H2-M3, Olfr755-ps1, Olfr99, Olfr756-ps1, Olfr101, Olfr102, Olfr103, Olfr104, GA_x5J8B7W5KGR-1115818-1115257, Olfr105, Olfr758-ps1, Olfr106, Olfr107, Olfr759-ps1, Olfr108, Olfr760-ps1
Downstream geneOlfr109, H2-M2, Olfr110, Olfr111, Olfr112, Olfr113, Olfr114, Olfr115, Olfr116, Olfr117, Olfr118, Olfr119, Scocp, Olfr120, Olfr1558-ps1, Olfr121, Olfr122, Olfr123, Olfr124, Olfr125, LOC672822, Olfr126, Olfr127, Olfr128, Ppia-ps17_697.1, Olfr761, Olfr1552-ps1, LOC100043265, Olfr129, Olfr130, Olfr131, Olfr132, Olfr133, Olfr134, Olfr135, Olfr138, Olfr137, Olfr762-ps1, Olfr136
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-301L05.bB6Ng01-301L05.g
ACCGA095946GA095947
length1,1601,113
definitionB6Ng01-301L05.b B6Ng01-301L05.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagcttaaagctcatcattttattttgcagtatattactctaagt
ttcatggatctctgcattcactatatgttggatttctcaagaactgctgt
ggcgctgccccatctttgatattattgccaccctttcctcttttgtaact
ggcaaaaggttttaccaaaattttattatttttaacatcaaggaaattac
tagaacaaaaagaaaataaatgacttgatacttatgggaaaagaaatttg
gacagaatgattccttggagagaaaaccccaagatgttaatgcccaggat
gctgctgggaaagtatgagagggttcattctggtcttctgtctgtcagaa
cacaaagggagatctgctgagattaagtattgtaagtataagtaagttca
tatatatgcattctagagtattacagcagcttagagtaatgggcgaatgt
aatattagcaaacatttctttcatttccccgtatttctatctctctctct
ttccttcctttcctctcttctcccatccttcactcccttccttccttaga
cacggtgtcttatagcccaaactagtgtaaaatatcgatgtaactcaggg
gaactaactttttaaactctttatttaaaaagaaaacattaattcagtta
tttgtttactttacatcaattcttatcacagtttcccttccctccttccc
tcccagtccctccctcaccctgccctttcttttctcttcaaagaagggga
ggtctctaatgggtatcaacctgcctaggtatttcaagttgcagtgaaga
ctaagcacatctactgaagctagacaaggcagaccagtaaggtgaaaagg
aaccaaaggctgtcatcagagtcagagagggcccctgcttctactgttag
gggtcccacaggaagaccaagctgagcgactgttacatatgtgcagagag
cctagtgatccaccacctcctgagagctggcatatgtggaatgtgccttc
accacggacttaagatctttcctcctcctctgataaaggaagtcagacca
gagccacgatgagtgagggtaagtggggccctctgtgactgcagtttgtg
aaaatgaacgaagtagcttccactgtacaagaaccccatctgacaatctt
aaaattttcc
gaattcctgaactttccaagacttttatcacgaaggggtgttggattttg
tccaatgatttctcagcatctaaagagatgattatgtggggttttttttg
tttgtttttttggttttttttgtctttgagtttctttatatagtggatta
cattgatggatttccatatattaaatcatcccttcatccctgaaatgaag
cctacttcatcatgatggatgatcattttgatgtgtccttggatttggtt
tgagagaattttattgagtatttttgcatcgatattcataagggaaatta
gtctgaagttttctatcgttgttgggtctttacgtggtttaggaatcaga
gtaactgtggcttcatagaatgaattgagtagaataccttctgtttctat
attgtggaatagtttgaggagaattggaattaggtcttctttgaaggtct
gatagaactctgcactaaacccatctggtcttggcttttttttttttttt
tttttgattgagagactattagaggatatgagactgtttaggacattaat
ctgatcctgattttactttggtacctggtatctgtctagaaatttgtcta
tttcatccaggttttccaggtttgttggctatagcttttttagtaggatc
tgttgatgttttagatttcctcatgttgtgttgcaaaccaatttttaaat
aatatcgtctgggacttgggccacactcaacattcatttgtacagatcat
ttcctaacatgaaacttcagatacaaaagatattttgctgtgtttagatt
tcctccattactttagctgataaattaagaattctttggaaaataactgg
taaaataaactatggtagacaaaatgtttaatttgtacattatttgctac
tgtaatttacatattcttttgttctgtcagaaacaaaacagttttgctac
acaactaggccctctacccatggtattcagatcaggatctgcccttgagc
tatgcctataaatgtctgatcacagaccactcagtgtgggtgctcgaggt
tctgaacctctatcagctctcttggagattcacacagatctgtgctaagg
gatgctgaaaatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_37595589_37596751
seq2: B6Ng01-301L05.b_46_1205

seq1  GAATTCAGCTTAAAGCTCATCATTTTATTTTGCAGTATATTACTCTAAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCTTAAAGCTCATCATTTTATTTTGCAGTATATTACTCTAAGT  50

seq1  TTCATGGATCTCTGCATTCACTATATGTTGGATTTCTCAAGAACTGCTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGGATCTCTGCATTCACTATATGTTGGATTTCTCAAGAACTGCTGT  100

seq1  GGCGCTGCCCCATCTTTGATATTATTGCCACCCTTTCCTCTTTTGTAACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGCTGCCCCATCTTTGATATTATTGCCACCCTTTCCTCTTTTGTAACT  150

seq1  GGCAAAAGGTTTTACCAAAATTTTATTATTTTTAACATCAAGGAAATTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAAAGGTTTTACCAAAATTTTATTATTTTTAACATCAAGGAAATTAC  200

seq1  TAGAACAAAAAGAAAATAAATGACTTGATACTTATGGGAAAAGAAATTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAACAAAAAGAAAATAAATGACTTGATACTTATGGGAAAAGAAATTTG  250

seq1  GACAGAATGATTCCTTGGAGAGAAAACCCCAAGATGTTAATGCCCAGGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGAATGATTCCTTGGAGAGAAAACCCCAAGATGTTAATGCCCAGGAT  300

seq1  GCTGCTGGGAAAGTATGAGAGGGTTCATTCTGGTCTTCTGTCTGTCAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTGGGAAAGTATGAGAGGGTTCATTCTGGTCTTCTGTCTGTCAGAA  350

seq1  CACAAAGGGAGATCTGCTGAGATTAAGTATTGTAAGTATAAGTAAGTTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAAGGGAGATCTGCTGAGATTAAGTATTGTAAGTATAAGTAAGTTCA  400

seq1  TATATATGCATTCTAGAGTATTACAGCAGCTTAGAGTAATGGGCGAATGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATGCATTCTAGAGTATTACAGCAGCTTAGAGTAATGGGCGAATGT  450

seq1  AATATTAGCAAACATTTCTTTCATTTCCCCGTATTTCTATCTCTCTCTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTAGCAAACATTTCTTTCATTTCCCCGTATTTCTATCTCTCTCTCT  500

seq1  TTCCTTCCTTTCCTCTCTTCTCCCATCCTTCACTCCCTTCCTTCCTTAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTCCTTTCCTCTCTTCTCCCATCCTTCACTCCCTTCCTTCCTTAGA  550

seq1  CACGGTGTCTTATAGCCCAAACTAGTGTAAAATATCGATGTAACTCAGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGGTGTCTTATAGCCCAAACTAGTGTAAAATATCGATGTAACTCAGGG  600

seq1  GAACTAACTTTTTAAACTCTTTATTTAAAAAGAAAACATTAATTCAGTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTAACTTTTTAAACTCTTTATTTAAAAAGAAAACATTAATTCAGTTA  650

seq1  TTTGTTTACTTTACATCAATTCTTATCACAGTTTCCCTTCCCTCCTTCCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTACTTTACATCAATTCTTATCACAGTTTCCCTTCCCTCCTTCCC  700

seq1  TCCCAGTCCCTCCCTCACCCTGCCCTTTCTTTTCTCTTCAAAGAAGGGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGTCCCTCCCTCACCCTGCCCTTTCTTTTCTCTTCAAAGAAGGGGA  750

seq1  GGTCTCTAATGGGTATCAACCTGCCTAGGTATTTCAAGTTGCAGTGAAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTCTAATGGGTATCAACCTGCCTAGGTATTTCAAGTTGCAGTGAAGA  800

seq1  CTAAGCACATCTACTGAAGCTAGACAAGGCAGACCAGTAAGGTGAAAAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGCACATCTACTGAAGCTAGACAAGGCAGACCAGTAAGGTGAAAAGG  850

seq1  AACCAAAGGCTGTCATCAGAGTCAGAGAGGGCCCCTGCTTCTACTGTTAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAAAGGCTGTCATCAGAGTCAGAGAGGGCCCCTGCTTCTACTGTTAG  900

seq1  GGGTCCCACAGGAAGACCAAGCTGAGCGACTGTTACATATGTGCAGAGAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCCCACAGGAAGACCAAGCTGAGCGACTGTTACATATGTGCAGAGAG  950

seq1  CCTAGTGATCCACCACCTCCTGAGAGCTTGGCATATGTGGAATGTGCCTT  1000
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CCTAGTGATCCACCACCTCCTGAGAGC-TGGCATATGTGGAATGTGCCTT  999

seq1  CA-CACGGACTTTAAGGATCTTTTCCTCCT-CTCTGATAAAAGGAAGTTC  1048
      || |||||||||  | |||| ||||||||| ||||||| |||||||| ||
seq2  CACCACGGACTT--AAGATC-TTTCCTCCTCCTCTGAT-AAAGGAAG-TC  1044

seq1  AGACCAGAGCCACGGATGAGTGAGGGTAAGTGGGGGCCCTCTGTGACTGC  1098
      ||||||||||||| ||||||||||||||||| ||||||||||||||||||
seq2  AGACCAGAGCCAC-GATGAGTGAGGGTAAGT-GGGGCCCTCTGTGACTGC  1092

seq1  AGTTTGTGAAAATAGACAGAGTAGCTT-CACTGTACAAG-ACACCATCTG  1146
      |||||||||||||  ||  |||||||| ||||||||||| || |||||||
seq2  AGTTTGTGAAAATGAACGAAGTAGCTTCCACTGTACAAGAACCCCATCTG  1142

seq1  GAAATCTT-ATATTTTCC  1163
        |||||| | |||||||
seq2  ACAATCTTAAAATTTTCC  1160