BAC Information

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BAC

Clone NameB6Ng01-303G04
Chromosome17 (Build37)
Map Location 56,883,401 - 56,883,612
singlet/doubletsinglet
Overlap genenone
Upstream geneEmr4, Zfp119, BC011426, EG433125, BC031441, Ebi3, Ccdc94, Shd, Fsd1, AW049765, Mpnd, Sh3gl1, Chaf1a, Ubxd1, Hdgfrp2, S3-12, 2310076L09Rik, Lrg1, Sema6b, Tnfaip8l1, D17Wsu104e, Dpp9, LOC668573, A230051N06Rik, Fem1a, Ticam1, M6prbp1, Arrdc5, Uhrf1, Jmjd2b, Ptprs, EG668592, Znrf4, Safb2, Safb, 2410015M20Rik, Rpl36, Lonp1, LOC619718, Tmem146, Ranbp3, Ccpn-ps, AI662250, Ndufa11, Fut4-ps1
Downstream geneNrtn, Dus3l, Gm546, Rfx2, Acsbg2, 1700061G19Rik, Mllt1, Asah3, Clpp, Alkbh7, Pspn, Gtf2f1, Khsrp, Slc25a41, Slc25a23, Crb3, Dennd1c, Tubb4, Tnfsf9, Cd70, Tnfsf14, C3, Gpr108, Trip10, LOC668635, Vav1, Emr1, EG224916
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-303G04.bB6Ng01-303G04.g
ACCGA097198GA097199
length112285
definitionB6Ng01-303G04.b B6Ng01-303G04.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
caggacagccagggctatacagcgaaaccctgtctttaaaaaagaaagaa
aaaagagagagaaagagaaagagagagagagagagagagagagagagaga
gagggagggagg
tctacttggtctctgctccttctttttctcccatcccattttctcccagg
tttgtggtcccccttgtacccatgaataactgagtcctgctggacgggac
agcttggtattcttgtggaagtcctaacagtgggagtagtggctgtctct
gactcttgcaggctctgggacccttttcctcctactggttgcctagtctg
taggccatttttggttgatgtcacttgggaggcctggtctttcagagaaa
atgtggagggggggctatgggggagaagggaagtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_56883401_56883612
seq2: B6Ng01-303G04.b_49_160 (reverse)

seq1  CCTCCCTCCCTCTCTCTCTCTCTCTTTCTCTCTTTCTCTCTTTCTTTCTC  50
                                                        
seq2  --------------------------------------------------  0

seq1  TCTTTCTCTCTCTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC  100
                                                  ||  ||
seq2  ------------------------------------------CCTCCCTC  8

seq1  TTTCTCTCTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC  150
        ||||||||||||| ||| ||| ||| ||| ||||||  ||||||  ||
seq2  CCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTC--TCTTTC--TC  54

seq1  TTTCTTTCTTTCTTTCTTTCTTTCTCGAGACAGGGTTTCTCTGTGTAGCC  200
      | ||||| |||||||||   ||| |  |||||||||||| |||| |||||
seq2  TCTCTTT-TTTCTTTCT---TTTTTAAAGACAGGGTTTCGCTGTATAGCC  100

seq1  CTGGCTGTCCTG  212
      ||||||||||||
seq2  CTGGCTGTCCTG  112