MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-304C13
Chromosome	5 (Build37)	17 (Build37)
Map Location	125,892,877 - 125,893,018	28,908,643 - 28,909,760
singlet/doublet	singlet	singlet
Overlap gene	none
Upstream gene	Setd8, BC003324, LOC606492, 6330548G22Rik, 2900002H16Rik, Rpl32-ps5c, Tmed2, Ddx55, Eif2b1, Gtf2h3, 4432405B04Rik, Atp6v0a2, Atp6v0a2, Dnahc10, Ccdc92, Zfp664, 3110032G18Rik, Ncor2, Scarb1, Ubc
Downstream gene	Dhx37, Bri3bp, Aacs, Tmem132b, EG231736, LOC100039178, LOC665760
Link	Open Mouse BAC browser

Click to get alignment info.

name	Setd8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67956 MGI:1915206
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	BC003324 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:80291 MGI:1933112
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC606492 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:606492
definition	gene_synonym : Ppia note : peptidylprolyl isomerase A pseudogene pseudo : _no_value

name	6330548G22Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76167 MGI:1923417
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2900002H16Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75695 MGI:1922945
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rpl32-ps5c (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:595150
definition	note : ribosomal protein L32 5C pseudogene pseudo : _no_value

name	Tmed2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56334 MGI:1929269
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ddx55 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67848 MGI:1915098
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Eif2b1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:209354 MGI:2384802
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gtf2h3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:209357 MGI:1277143
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4432405B04Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67978 MGI:1915228
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Atp6v0a2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21871 MGI:104855
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Atp6v0a2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21871 MGI:104855
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dnahc10 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56087 MGI:1860299
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 18 ESTs, 23 Proteins

name	Ccdc92 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:215707 MGI:106485
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zfp664 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:269704 MGI:2442505
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	3110032G18Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73121 MGI:1920371
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ncor2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20602 MGI:1337080
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Scarb1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20778 MGI:893578
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ubc (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22190 MGI:98889
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dhx37 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:208144 MGI:3028576
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Bri3bp (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76809 MGI:1924059
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Aacs (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78894 MGI:1926144
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tmem132b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:208151 MGI:3609245
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 19 ESTs, 2 Proteins

name	EG231736 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:231736 MGI:3648712
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 28 Proteins

name	LOC100039178 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039178
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs

name	LOC665760 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665760
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 15 ESTs, 2 Proteins pseudo : _no_value

name	Setd8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:45580701 GeneID:67956 MGI:1915206
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SET domain containing (lysine methyltransferase) 8 transcript_id : NM_030241.2

name	BC003324 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:13385073 GeneID:80291 MGI:1933112
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC003324 transcript_id : NM_030259.1

name	6330548G22Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981324 GeneID:76167 MGI:1923417
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 6330548G22 gene transcript_id : NM_029532.2

name	2900002H16Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981150 GeneID:75695 MGI:1922945
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2900002H16 gene transcript_id : NM_021430.2

name	Tmed2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:55742882 GeneID:56334 MGI:1929269
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane emp24 domain trafficking protein 2 transcript_id : NM_019770.2

name	Ddx55 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:144922713 GeneID:67848 MGI:1915098
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 transcript_id : NM_026409.3

name	Eif2b1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142384946 GeneID:209354 MGI:2384802
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : eukaryotic translation initiation factor 2B, subunit 1 (alpha) transcript_id : NM_145371.3

name	Gtf2h3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31340972 GeneID:209357 MGI:1277143
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : general transcription factor IIH, polypeptide 3 transcript_id : NM_181410.2

name	4432405B04Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803008 GeneID:67978 MGI:1915228
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4432405B04 gene transcript_id : NM_026486.2

name	Atp6v0a2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142367040 GeneID:21871 MGI:104855
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATPase, H+ transporting, lysosomal V0 subunit A2 transcript_id : NM_011596.3

name	Atp6v0a2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142367040 GeneID:21871 MGI:104855
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATPase, H+ transporting, lysosomal V0 subunit A2 transcript_id : NM_011596.3

name	Dnahc10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149254592 GeneID:56087 MGI:1860299
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 18 ESTs, 23 Proteins product : dynein, axonemal, heavy chain 10 transcript_id : XM_001474159.1

name	Ccdc92 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110625892 GeneID:215707 MGI:106485
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coiled-coil domain containing 92 transcript_id : NM_144819.2

name	Zfp664 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:126723512 GeneID:269704 MGI:2442505
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 664 transcript_id : NM_001081750.1

name	3110032G18Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142358197 GeneID:73121 MGI:1920371
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 3110032G18 gene transcript_id : NM_028443.2

name	Ncor2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119226234 GeneID:20602 MGI:1337080
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nuclear receptor co-repressor 2 transcript_id : NM_011424.2

name	Scarb1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:14389422 GeneID:20778 MGI:893578
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : scavenger receptor class B, member 1 transcript_id : NM_016741.1

name	Ubc (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149254583 GeneID:22190 MGI:98889
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ubiquitin C transcript_id : XM_001471699.1

name	Dhx37 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:42600570 GeneID:208144 MGI:3028576
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DEAH (Asp-Glu-Ala-His) box polypeptide 37 transcript_id : NM_203319.1

name	Bri3bp (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:79749982 GeneID:76809 MGI:1924059
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Bri3 binding protein transcript_id : NM_029752.2

name	Aacs (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21313519 GeneID:78894 MGI:1926144
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : acetoacetyl-CoA synthetase transcript_id : NM_030210.1

name	Tmem132b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94375668 GeneID:208151 MGI:3609245
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 19 ESTs, 2 Proteins product : transmembrane protein 132B transcript_id : XM_979000.1

name	EG231736 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149254594 GeneID:231736 MGI:3648712
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 28 Proteins product : predicted gene, EG231736 transcript_id : XM_144574.4

name	LOC100039178 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149254587 GeneID:100039178
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs product : hypothetical protein LOC100039178, transcript variant 2 transcript_id : XM_001472514.1

name	LOC100039178 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149254585 GeneID:100039178
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100039178, transcript variant 1 transcript_id : XM_001472496.1

name	Setd8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:45580702 CCDS:CCDS19675.1 GeneID:67956 MGI:1915206
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0018024 - histone-lysine N-methyltransferase activity [Evidence IEA]; GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0016568 - chromatin modification [Evidence IEA] codon_start : 1 product : SET domain-containing protein protein_id : NP_084517.2

name	BC003324 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385074 CCDS:CCDS19676.1 GeneID:80291 MGI:1933112
definition	codon_start : 1 product : hypothetical protein LOC80291 protein_id : NP_084535.1

name	6330548G22Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21624627 CCDS:CCDS19677.1 GeneID:76167 MGI:1923417
definition	GO_component : GO:0005689 - minor (U12-dependent) spliceosome complex [Evidence ISS] GO_function : GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0008380 - RNA splicing [Evidence ISS] codon_start : 1 product : U11/U12 snRNP 35K protein_id : NP_083808.1

name	2900002H16Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:10946796 CCDS:CCDS19678.1 GeneID:75695 MGI:1922945
definition	codon_start : 1 product : hypothetical protein LOC75695 protein_id : NP_067405.1

name	Tmed2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9790015 CCDS:CCDS19679.1 GeneID:56334 MGI:1929269
definition	GO_component : GO:0016021 - integral to membrane [Evidence ISS] [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005792 - microsome [Evidence ISS]; GO:0042589 - zymogen granule membrane [Evidence ISS] GO_process : GO:0006888 - ER to Golgi vesicle-mediated transport [Evidence IEA]; GO:0006886 - intracellular protein transport [Evidence ISS]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA]; GO:0006903 - vesicle targeting [Evidence ISS] codon_start : 1 note : Sid394p product : coated vesicle membrane protein protein_id : NP_062744.1

name	Ddx55 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:117647283 GeneID:67848 MGI:1915098
definition	GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] codon_start : 1 product : DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 protein_id : NP_080685.2

name	Eif2b1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21703744 GeneID:209354 MGI:2384802
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005851 - eukaryotic translation initiation factor 2B complex [Evidence ISS]; GO:0005624 - membrane fraction [Evidence ISS]; GO:0005886 - plasma membrane [Evidence ISS] GO_function : GO:0005085 - guanyl-nucleotide exchange factor activity [Evidence ISS]; GO:0005515 - protein binding [Evidence ISS] [Evidence IPI] GO_process : GO:0044249 - cellular biosynthesis [Evidence IEA] codon_start : 1 note : eukaryotic translation initiation factor 2B, subunit 1 (alpha, 26kDa) product : eukaryotic translation initiation factor 2B, subunit 1 protein_id : NP_663346.1

name	Gtf2h3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31088894 CCDS:CCDS19680.1 GeneID:209357 MGI:1277143
definition	GO_function : GO:0003684 - damaged DNA binding [Evidence ISS]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence ISS]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006289 - nucleotide-excision repair [Evidence ISS]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence ISS]; GO:0006974 - response to DNA damage stimulus [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : general transcription factor IIH, polypeptide 3, 34kDa product : general transcription factor IIH, polypeptide 3 protein_id : NP_852075.1

name	4432405B04Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385970 GeneID:67978 MGI:1915228
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : tectonic 2 protein_id : NP_080762.1

name	Atp6v0a2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83627707 GeneID:21871 MGI:104855
definition	GO_component : GO:0001669 - acrosome [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0015078 - hydrogen ion transporter activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0015992 - proton transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy note : T-cell expressing clone j6; V-ATPase a2; ATPase, H+ transporting, lysosomal V0 subunit a; ATPase, H+ transporting, lysosomal (vacuolar proton pump) non-catalytic accessory protein 2 (38kD) product : ATPase, H+ transporting, lysosomal V0 subunit A2 protein_id : NP_035726.2

name	Atp6v0a2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83627707 GeneID:21871 MGI:104855
definition	GO_component : GO:0001669 - acrosome [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0015078 - hydrogen ion transporter activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0015992 - proton transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy note : T-cell expressing clone j6; V-ATPase a2; ATPase, H+ transporting, lysosomal V0 subunit a; ATPase, H+ transporting, lysosomal (vacuolar proton pump) non-catalytic accessory protein 2 (38kD) product : ATPase, H+ transporting, lysosomal V0 subunit A2 protein_id : NP_035726.2

name	Dnahc10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149254593 GeneID:56087 MGI:1860299
definition	codon_start : 1 product : dynein, axonemal, heavy chain 10 protein_id : XP_001474209.1

name	Ccdc92 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21450195 CCDS:CCDS19681.1 GeneID:215707 MGI:106485
definition	codon_start : 1 product : coiled-coil domain containing 92 protein_id : NP_659068.1

name	Zfp664 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:126723513 GeneID:269704 MGI:2442505
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : zinc finger protein ZFOC1 product : zinc finger protein 664 protein_id : NP_001075219.1

name	3110032G18Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38348700 CCDS:CCDS19682.1 GeneID:73121 MGI:1920371
definition	codon_start : 1 product : hypothetical protein LOC73121 protein_id : NP_082719.1

name	Ncor2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:119226235 GeneID:20602 MGI:1337080
definition	GO_component : GO:0016604 - nuclear body [Evidence IDA]; GO:0005634 - nucleus [Evidence IC] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA]; GO:0003714 - transcription corepressor activity [Evidence IMP]; GO:0016564 - transcriptional repressor activity [Evidence IMP] GO_process : GO:0016481 - negative regulation of transcription [Evidence IMP]; GO:0045892 - negative regulation of transcription, DNA-dependent [Evidence IDA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : silencing mediator of retinoid acid and thyroid hormone receptor product : nuclear receptor co-repressor 2 protein_id : NP_035554.2

name	Scarb1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:14389423 CCDS:CCDS19683.1 GeneID:20778 MGI:893578
definition	GO_component : GO:0016599 - caveolar membrane [Evidence IDA]; GO:0000299 - integral to membrane of membrane fraction [Evidence IDA]; GO:0005887 - integral to plasma membrane [Evidence IDA] GO_function : GO:0004872 - receptor activity [Evidence IEA] codon_start : 1 note : scavenger receptor class B type I; scavenger receptor class B1 product : scavenger receptor class B, member 1 protein_id : NP_058021.1

name	Ubc (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149254584 GeneID:22190 MGI:98889
definition	codon_start : 1 exception : unclassified translation discrepancy product : ubiquitin C protein_id : XP_001471749.1

name	Dhx37 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:42600571 CCDS:CCDS19685.1 GeneID:208144 MGI:3028576
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0008026 - ATP-dependent helicase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] codon_start : 1 product : DEAH (Asp-Glu-Ala-His) box polypeptide 37 protein_id : NP_976064.1

name	Bri3bp (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037467 CCDS:CCDS19686.1 GeneID:76809 MGI:1924059
definition	GO_component : GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : Bri3 binding protein protein_id : NP_084028.1

name	Aacs (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313520 CCDS:CCDS19687.1 GeneID:78894 MGI:1926144
definition	GO_function : GO:0030729 - acetoacetate-CoA ligase activity [Evidence IEA] codon_start : 1 product : acetoacetyl-CoA synthetase protein_id : NP_084486.1

name	Tmem132b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94375669 GeneID:208151 MGI:3609245
definition	codon_start : 1 product : similar to transmembrane protein 132B protein_id : XP_984094.1

name	EG231736 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149254595 GeneID:231736 MGI:3648712
definition	codon_start : 1 product : hypothetical protein protein_id : XP_144574.2

name	LOC100039178 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149254586 GeneID:100039178
definition	codon_start : 1 product : hypothetical protein isoform 1 protein_id : XP_001472546.1

name	LOC100039178 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149254588 GeneID:100039178
definition	codon_start : 1 product : hypothetical protein isoform 2 protein_id : XP_001472564.1

name	LOC665760 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149254596 GeneID:665760
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 15 ESTs, 2 Proteins product : similar to Coiled-coil domain containing 115 pseudo : _no_value transcript_id : XR_031753.1

clone name	MSMg01-526F11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-430A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-277M07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-151P04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-268D02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-440J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498P01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-320L03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-418M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476P24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-068D23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-298C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-382B23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435C12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-414B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-362G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-074J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060O22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-071L07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411M24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-508G08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-269B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-546O08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-289O16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-410H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-491O04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-088F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-133L12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337G18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-431I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-190E13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-320P01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-303P07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-204F07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-420M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139H15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-513F14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-375B23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-432O07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-084O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-461K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-379J20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-266D16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-093N05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-132G22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-055H11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-108G08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-109B22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-270F12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-353C16
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-353D18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-396K02
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-403K20
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-414M11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-422L13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-435F02
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-446A02
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-506K01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-536D12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-547H04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-470L07
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-487J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-182D09
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-160H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-291D17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-458C23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-177J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-491E01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-067I09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-349E24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-339E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-234P01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-186F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-476J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-142H10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-490E01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-355G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-375M24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-173P15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262M22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-097G23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040K13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-345K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-238F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-079M23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-304C13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-089I22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085F02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074M16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-190B19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-172M06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125C08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-222H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224B12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-229N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133L21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-267I02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-106F12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-165N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145I23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-343C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051L09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311P19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-192G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166C15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-330N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211F12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130P13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-220C08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-315I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344E04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-148C24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273F07
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-304C13.b	B6Ng01-304C13.g
ACC	GA097783	GA097784
length	854	1,118
definition	B6Ng01-304C13.b	B6Ng01-304C13.g
singlet/doublet	singlet	singlet
BLAST hit	unique	unique
Map location.	(125,892,877 - 125,893,018)	(28,908,643 - 28,909,760)
sequence	gaattcacactacaaccttgctggttaagctttgctgtcaaacggactgg atttgaactccccgtcccctgggtatatctgtgagggtattcccaccaac ttgggaaggaagacctacctcgaatttggatggcatcatcccacagggtg ggggaccaagactgaatgggatgggagaaggggaagcctaatgagttcca acattcatgtgaggtgtcttgcttcagaaccccactacacactcctttgc catggtctccaccaggccctctgtgtcttctgaagttacaaatcaaaata aatccctattaagaaaaaaaaaaaaaaagccaggcaatggtggcccatgc ctttaatcccagcacttgggagccagaagcaggcagatttctgagttcga ggctagcctggtctacagagtgagttccaggatagccagggctacacaga gaaaccctgtctgggaaaacacatatatataaatgagcctggaaatctgt tgtggttcctcagaaaattggacccagctattcagcaataccactcctgg gcatatacccagaacttgccaacttgtaataaggcacatgctccaccatg ttcatagcagccttttttataatagccagaaactggaaacaatccagatg tccctcaacaaaggaaagaatacagaaaaatgtggtacatttacacaatg aagtactactcagctattaaaaacaataacttcatgaaattcacaggcaa atggatggaacttgaaaatatcctgagtgaggtaactcagtcacaaaaga acacacacatgtatgtactcactgataagtcaattagtctaaaagttcgg aata	gaattccaggtgttagtggcagcttctgccaggcttcacatcctagtcaa tgctacagaggctgcgggagtgttttggtaccttgtgtgtttatgtgttt aaattggacctctcctgtagcccagtctggcccccaactacctatgtaga caaggattgcccttgaacttctgatcctcctgcctctgattctcaagagc tcggattccaggcactggtgctgagaatcaatctcggggttttgtgcgtg cttggcaagagctctaccagcctagctatgtccccagcccactaagagtg gaaggtgttttgttttgtttttttccagacagggtttctctttgtagccc tggctgtcctggaactcactctgtagaccaggctggcctcaaactcagaa atccgactgcctctgcctcccaagagctgggattaaaggcatgtgccacc actgcccaacaagagtggaaatcttaagcagagtgctgatactgtctgtc agatttggagggcatggccagcagttctgagaaaagagcaagaagcccct gggaagaaacaagtgctgagagcccccccccacacacacacaccttgatc tgagttacagtgtggggtccccagggcagacctgaggcccactcaagcca agctgacagagctatgtcatctgtttggacatggtggctgagggaggttg ggacaggtgactaggagtcccaatccctgcctggaatataagtaggaaga agagacctcaaggaagagataatgaacttgaccttgggtccttgactctt ccagagcctgtgaaatcacaggaggggggaacatggatgtagaccaggct agcatcctctccatgggtgatggcctaaacgctgggggactaaacatggt aagacaagatacaaggatgttggtccagagggcatcatctgtgagaaggc aggaaggggtggagcagtgagaactgggagagagaggaggctggccaggc accctggagtcacagatgacacacagaggagtcactgttcttgacgtggt gactgttgactttgagccacatataggacagaacacagtaccaattgact agttatgagagcagtgta
quality values	Open. Hide. 58 33 23 35 58 26 20 40 32 62 62 62 41 38 62 62 62 62 62 62 62 62 62 49 62 47 62 54 62 62 62 32 22 27 28 27 22 28 19 19 32 32 28 32 34 59 59 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 59 59 59 59 59 43 43 56 56 43 59 59 49 54 59 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 54 59 62 62 54 62 59 59 62 62 62 62 59 59 62 62 62 62 62 62 62 62 59 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 59 62 59 59 62 62 62 62 62 62 62 59 62 62 62 59 62 59 62 59 59 56 51 59 59 59 62 56 56 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 56 56 62 44 56 56 56 56 62 56 56 56 62 36 56 56 56 56 62 62 47 54 62 62 62 54 62 62 56 56 54 54 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 54 62 62 62 62 62 62 62 62 62 62 62 46 62 54 47 56 56 54 54 56 62 56 62 47 56 56 46 56 56 62 56 38 62 62 62 62 54 62 62 62 62 48 62 54 47 50 52 62 52 62 62 62 62 42 52 48 52 62 54 62 62 54 52 52 52 52 52 54 62 58 54 54 47 42 54 47 40 46 58 39 52 58 58 54 54 45 54 52 41 41 54 54 58 58 58 46 42 35 52 41 54 52 58 52 52 52 52 54 52 54 54 41 41 24 39 38 34 39 58 58 58 41 39 54 52 54 52 52 35 30 35 34 28 34 33 58 52 46 52 39 54 52 54 46 48 54 52 25 44 47 47 33 50 48 42 50 51 49 47 29 48 50 49 31 33 19 58 50 50 51 46 50 46 52 42 42 42 41 17 40 50 23 50 45 50 49 50 51 38 32 31 39 31 27 50 50 50 49 28 28 36 29 58 50 40 31 50 37 46 41 54 28 39 34 53 32 46 39 51 38 48 27 49 31 25 32 40 37 49 34 26 27 51 41 29 31 29 39 54 58 50 49 35 26 53 41 20 20 50 39 50 42 32 46 50 50 50 37 42 52 32 31 39 23 8 18 22 25 50 37 35 26 35 23 31 49 25 17 51 30 35 41 43 37 54 54 50 37 37 35 35 53 37 50 44 11 47 42 30 8 25 32 31 20 28 39 32 42 16 19 26 24 52 25 54 54 46 33 52 40 41 35 53 31 46 21 51 17 53 39 53 25 42 37 42 32 46 33 32 17 36 42 32 33 35 39 52 25 52 15 15 44 33 35 32 25 31 45 30 46 47 40 30 21 21 31 24 14 14 47 31 36 29	Open. Hide. 62 35 37 47 62 62 47 41 49 36 11 26 13 12 12 11 22 24 22 18 28 28 31 38 45 51 50 62 62 59 49 62 62 62 62 62 59 59 62 59 62 54 54 62 62 62 59 62 62 62 62 62 62 59 59 56 26 18 28 23 48 37 48 43 32 35 54 54 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 54 62 62 62 62 62 59 62 62 62 62 62 62 59 59 62 54 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 59 62 62 59 62 62 62 62 62 59 59 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 30 30 34 27 40 30 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 49 49 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 56 56 56 46 28 56 56 56 62 62 62 62 62 62 62 49 54 62 62 62 62 62 43 20 17 20 15 7 12 14 18 50 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 62 62 62 62 46 62 62 62 62 62 54 53 62 62 62 62 62 62 62 62 58 58 54 54 58 49 58 58 58 58 58 54 58 54 54 51 58 58 58 58 54 48 54 54 58 54 58 54 58 58 58 58 28 58 58 58 54 52 58 52 58 54 58 54 58 54 46 54 54 47 47 48 54 52 58 54 58 47 58 58 58 54 42 58 52 54 58 54 51 49 45 39 58 51 49 47 47 47 41 41 47 47 48 50 46 41 58 50 58 39 58 46 58 51 58 58 58 58 58 49 58 53 58 58 51 38 58 51 52 58 52 58 53 58 50 58 58 58 58 50 49 58 49 50 46 34 58 58 49 54 43 39 26 58 51 58 44 28 54 42 44 31 35 37 50 48 30 43 41 49 50 35 54 40 49 58 49 28 30 50 50 58 36 58 52 50 50 49 58 42 50 50 51 58 58 51 51 51 41 50 32 30 37 51 54 51 37 54 38 41 54 49 51 9 54 42 31 20 31 13 53 52 54 43 52 42 38 39 54 41 39 35 32 53 42 31 42 52 26 53 26 54 42 26 35 42 52 40 30 44 44 36 42 40 45 38 36 25 37 32 37 38 49 32 40 42 37 26 39 54 26 54 34 21 54 12 29 24 24 27 32 24 40 38 46 33 29 29 46 17 39 29 38 45 32 52 47 20 30 39 53 31 24 16 40 28 33 37 53 51 32 33 45 28 34 33 26 28 40 43 39 40 32 26 20 33 37 16 31 46 31 42 36 37 34 51 32 23 31 23 31 24 22 25 20 6 46 46 46 46 33 30 28 31 24 31 30 25 26 33 31 26 18 20 26 11 24 22 18 24 33 36 33 22 33 25 32 20 46 30 31 31 31 31 24 31 38 48 27 29 31 38 28 24 46 9 18 29 11 46 19 25 22 32 26 25 48 46 46 9 31 24 32 24 46 25 25 13 31 33 41 24 22 19 23 30 17 9 37 25 29 21 26 21 18 17 23 27 16 22 25 31 14 10 13 23 18 5 7 8 32 21 41 31 12 19 7 10 16 42 24 28 19 21 20 31 7 31 25 5 18 17 26 11 30 18 25 11 35 41 6 10 7 8 22 7 21 7 8 9 18 21 7 24 32 27 28 13 32 9 25 7 24 9 21 12 22 12 11 19 10 11 8 29 22 34 8 16 10 13 17 19 9 11 30 8 11 4 7 7 6 20 30 31 8 11 9 4 4 4 5 5 6 14 8 7 4 4 4 11 9 24 8 19 11 6 14 13 7 9 11 15 9 10 12 28 24 10 6 11 3 3 6 8 20 16 10 3 3 4 14 20 5 14 10 6 11 9 19 16 8 8 6 6 4 5 5 6 13 7 4 5 4 9 5 6 10 9 1 3 2 5 14 16 4 6 7 8 5 21 22 8 4 12 3 6 12 11 9 17 7 18 21 8 6 6 4 8 4 4

Alignment Information

BAC End 1

BAC End 2

seq1: chr5_125892877_125893018
seq2: B6Ng01-304C13.b_371_513 (reverse)

seq1  -TTTTCGAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAACTCAC  49
       ||| | ||||||||||||||||||||||||||||| |||||||||||||
seq2  TTTTCCCAGACAGGGTTTCTCTGTGTAGCCCTGGCTATCCTGGAACTCAC  50

seq1  TCTGTAGACCAGGCTGGCCTCAAACTCAGAAATCCGCCTGCTTCTGCCTC  99
      ||||||||||||||| ||||| |||||||||||| ||||||||||| |||
seq2  TCTGTAGACCAGGCTAGCCTCGAACTCAGAAATCTGCCTGCTTCTGGCTC  100

seq1  CCAAGTGCTGGGACTAAAGGCATGCGCCACCACTGCCCGGCTT  142
      ||||||||||||| |||||||||| ||||||| |||| |||||
seq2  CCAAGTGCTGGGATTAAAGGCATGGGCCACCATTGCCTGGCTT  143

seq1: chr17_28908643_28909760
seq2: B6Ng01-304C13.g_69_1186

seq1  GAATTCCAGGTGTTAGTGGCAGCTTCTGCCAGGCTTCACATCCTAGTCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGTGTTAGTGGCAGCTTCTGCCAGGCTTCACATCCTAGTCAA  50

seq1  TGCTACAGAGGCTGCGGGAGTGTTTTGGTACCTTGTGTGTTTATGTGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTACAGAGGCTGCGGGAGTGTTTTGGTACCTTGTGTGTTTATGTGTTT  100

seq1  AAATTGGACCTCTCCTGTAGCCCAGTCTGGCCCCCAACTACCTATGTAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGGACCTCTCCTGTAGCCCAGTCTGGCCCCCAACTACCTATGTAGA  150

seq1  CAAGGATTGCCCTTGAACTTCTGATCCTCCTGCCTCTGATTCTCAAGAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGATTGCCCTTGAACTTCTGATCCTCCTGCCTCTGATTCTCAAGAGC  200

seq1  TCGGATTCCAGGCACTGGTGCTGAGAATCAATCTCGGGGTTTTGTGCGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGATTCCAGGCACTGGTGCTGAGAATCAATCTCGGGGTTTTGTGCGTG  250

seq1  CTTGGCAAGAGCTCTACCAGCCTAGCTATGTCCCCAGCCCACTAAGAGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGCAAGAGCTCTACCAGCCTAGCTATGTCCCCAGCCCACTAAGAGTG  300

seq1  GAAGGTGTTTTGTTTTGTTTTTTTCCAGACAGGGTTTCTCTTTGTAGCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGTGTTTTGTTTTGTTTTTTTCCAGACAGGGTTTCTCTTTGTAGCCC  350

seq1  TGGCTGTCCTGGAACTCACTCTGTAGACCAGGCTGGCCTCAAACTCAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGTCCTGGAACTCACTCTGTAGACCAGGCTGGCCTCAAACTCAGAA  400

seq1  ATCCGACTGCCTCTGCCTCCCAAGAGCTGGGATTAAAGGCATGTGCCACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCGACTGCCTCTGCCTCCCAAGAGCTGGGATTAAAGGCATGTGCCACC  450

seq1  ACTGCCCAACAAGAGTGGAAATCTTAAGCAGAGTGCTGATACTGTCTGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCCCAACAAGAGTGGAAATCTTAAGCAGAGTGCTGATACTGTCTGTC  500

seq1  AGATTTGGAGGGCATGGCCAGCAGTTCTGAGAAAAGAGCAAGAAGCCCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTGGAGGGCATGGCCAGCAGTTCTGAGAAAAGAGCAAGAAGCCCCT  550

seq1  GGGAAGAAACAAGTGCTGAGAGCCCCCCCCCACACACACACACCTTGATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGAAACAAGTGCTGAGAGCCCCCCCCCACACACACACACCTTGATC  600

seq1  TGAGTTACAGTGTGGGGTCCCCAGGGCAGACCTGAGGCCCACTCAAGCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTACAGTGTGGGGTCCCCAGGGCAGACCTGAGGCCCACTCAAGCCA  650

seq1  AGCTGACAGAGCTATGTCATCTGTTTGGACATGGTGGCTGAGGGAGGTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGACAGAGCTATGTCATCTGTTTGGACATGGTGGCTGAGGGAGGTTG  700

seq1  GGACAGGTGACTAGGAGTCCCAATCCCTGCCTGGAATATAAGTAGGAAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAGGTGACTAGGAGTCCCAATCCCTGCCTGGAATATAAGTAGGAAGA  750

seq1  AGAGACCTCAAGGAAGAGATAATGAACTTGACCTTGGGTCCTTGACTCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACCTCAAGGAAGAGATAATGAACTTGACCTTGGGTCCTTGACTCTT  800

seq1  CCAGAGCCTGTGAAATCACAGGAGGGGGGAACATGGATGTAGACCAGGCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGCCTGTGAAATCACAGGAGGGGGGAACATGGATGTAGACCAGGCT  850

seq1  AGCATCCTCTCCATGGGTGATGG-CTAAACGCT-GGGGACTAAACATGGT  898
      ||||||||||||||||||||||| ||||||||| ||||||||||||||||
seq2  AGCATCCTCTCCATGGGTGATGGCCTAAACGCTGGGGGACTAAACATGGT  900

seq1  AAGACAAGATACAAGGATGTTGGTCCAGAGGGCA-CATCTGTGAGAAGGC  947
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AAGACAAGATACAAGGATGTTGGTCCAGAGGGCATCATCTGTGAGAAGGC  950

seq1  AGGAAGGG--TGAGCAGGTGAGAACT-GGAGAGAGAGGAGGGCTGG-CAG  993
      ||||||||   ||||| ||||||||| |||||||||||| |||||| |||
seq2  AGGAAGGGGTGGAGCA-GTGAGAACTGGGAGAGAGAGGA-GGCTGGCCAG  998

seq1  GCACCTGGGAGTCAACAGAAGGACACACAGGAGGAGTCACTGTTCTTGAC  1043
      |||||  |||||| |||| | |||||||| ||||||||||||||||||||
seq2  GCACCCTGGAGTC-ACAG-ATGACACACA-GAGGAGTCACTGTTCTTGAC  1045

seq1  GTGGTGACTG-TGACCTTGAGCCCAACATATTAGGACAG-ACACAGGTAC  1091
      |||||||||| |||| |||||||  ||||| |||||||| ||||| ||||
seq2  GTGGTGACTGTTGACTTTGAGCC--ACATA-TAGGACAGAACACA-GTAC  1091

seq1  CA--TGACTAGGTTATGAGAGGCAGTGTA  1118
      ||  |||||| ||||||||| ||||||||
seq2  CAATTGACTA-GTTATGAGA-GCAGTGTA  1118

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information