BAC Information

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BAC

Clone NameB6Ng01-304G13
Chromosome17 (Build37)
Map Location 76,119,084 - 76,220,167
singlet/doubletdoublet
Overlap genenone
Upstream geneTtc27, LOC100043672, Ltbp1, EG621988, Rasgrp3, 2810405J04Rik, LOC668787
Downstream geneLOC100043885, LOC100043886
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-304G13.bB6Ng01-304G13.g
ACCGA097973GA097974
length5101,181
definitionB6Ng01-304G13.b B6Ng01-304G13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(76,219,652 - 76,220,167)(76,119,084 - 76,120,262)
sequence
ctagtctcccaggtatatttaccaggaaactgggtctatagacatgatgc
tgagaatgactttgtctcctttgcaaacttgctgagcaagcactcttgag
ggtagagaggagaggcaagctcattacagaggagaatggaaacaacccac
agctaatgatgaaagtagtaagttacaaagtcacttccctgtcatttcca
tcaagtataaagcaggataaagttgatctttgaggccctctcaagctctt
aaagtccttaatctgtggagagtagctatatctatcagaacatataatgt
cacaaaatcttcttgactacagaccataatttctgttgtactaacacaga
tctgctataccttaaacacgggattttaaaagaagggcagagaatacaca
ctacgaactgggaagccaggagaggcccattggacacgcaaactttatat
gccccagtacaggggaatgccagggccaaaaaatgggaatgggtgggcag
ggaagtgggg

gaattctccatatcttcaaggggaggtacatttagggcaatctacctact
acctataattttaccttttatattaaggtaggatctcccaaaattgttca
gaatatctttgaatacaatctgtagctcaggctaactttgaatttgtgat
catcctacctcaactttctgagtaagtggtactgtatggctgtccaacga
ggcctggcttctgaaaaagttttattaacattttatgcattcccatattt
taagatatttggtttgtttctgagtagaaacaggggttatattaattgtt
tatgtaagctggcgtgtttagttgtcataagtgatatattgttgaaattt
atcttttgataataataagttcattgtttaacaataatcatttcaaccag
tggtttttaaggctcactgtaaaaataatctttgttttatttctccaaga
aagaatctaaaatgtagagtcattggatagaagtgagtgaactctatcaa
aggcttccggtacatgttgtcacatgactttccgggatctagaggaatct
gagaagattaaatagctgtatatgcctgtgtaagaaactgccccaagcct
cacagcttaaaagaataaattttgatcatctctcagcttccctgggtcag
ctctttgggcgtggctcatttgagatctctctcaggctgtgagtaagttg
gtggccagggccacatttatctcagcattcactgcagaggacttgtttcc
atgttcacaggtatagacaggcttcatgtcctccttaccccattggtctc
tcacaacatgggggctctcagtatgacttgcttgttcctctcaaggagag
gaggtaagacagagaaagtgggcagtaccaagtcacatttcatttggaag
gactttactcatgtttcctctactgtgcttgtcaatagtgagtcctgagt
ctagctcatattggaaggagggcaaatgagtagacacagcatcagctcaa
gaagagagcatcactggtgaccatgtgagatgttgctttaccaaagagct
caagtatcactgccaccgtccagatttaagaaatttaaaaaaatgtaaat
tattatttcttagtatactacgtgccgatttcttggaatattaagtaagg
aatatgtgatatgccctcactatagttgttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_76219652_76220167
seq2: B6Ng01-304G13.b_45_560 (reverse)

seq1  CCCCACTTCCCTGCCCACCCATTCCCATTTTTTGGCCCTGGCATTCCCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCACTTCCCTGCCCACCCATTCCCATTTTTTGGCCCTGGCATTCCCCT  50

seq1  GTACTGGGGCATATAAAGTTTGCGTGTCCAATGGGCCTCTCCTGGCTTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTGGGGCATATAAAGTTTGCGTGTCCAATGGGCCTCTCCTGGCTTCC  100

seq1  CAGTTCGTAGTGTGTATTCTCTGCCCTTCTTTTAAAATCCCGTGTTTAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCGTAGTGTGTATTCTCTGCCCTTCTTTTAAAATCCCGTGTTTAAG  150

seq1  GTATAGCAGATCTGTGTTAGTACAACAGAAATTATGGTCTGTAGTCAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAGCAGATCTGTGTTAGTACAACAGAAATTATGGTCTGTAGTCAAGA  200

seq1  AGATTTTGTGACATTATATGTTCTGATAGATATAGCTACTCTCCACAGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTTGTGACATTATATGTTCTGATAGATATAGCTACTCTCCACAGAT  250

seq1  TAAGGACTTTAAGAGCTTGAGAGGGCCTCAAAGATCAACTTTATCCTGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGACTTTAAGAGCTTGAGAGGGCCTCAAAGATCAACTTTATCCTGCT  300

seq1  TTATACTTGATGGAAATGACAGGGAAGTGACTTTGTAACTTACTACTTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATACTTGATGGAAATGACAGGGAAGTGACTTTGTAACTTACTACTTTC  350

seq1  ATCATTAGCTGTGGGTTGTTTCCATTCTCCTCTGTAATGAGCTTGCCTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTAGCTGTGGGTTGTTTCCATTCTCCTCTGTAATGAGCTTGCCTCT  400

seq1  CCTCTCTACCCTCAAGAGTGCTTGCTCAGCAAGTTTGCAAAGGAGACAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCTACCCTCAAGAGTGCTTGCTCAGCAAGTTTGCAAAGGAGACAAA  450

seq1  GTCATTCTCAGCATCATGTCTATAGACCCAGTTTCCTGGTAAATATACCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTCTCAGCATCATGTCTATAGACCCAGTTTCCTGGTAAATATACCT  500

seq1  GGGAGACTAGGAATTC  516
      ||||||||||||||||
seq2  GGGAGACTAGGAATTC  516


seq1: chr17_76119084_76120262
seq2: B6Ng01-304G13.g_67_1247

seq1  GAATTCTCCATATCTTCAAGGGGAGGTACATTTAGGGCAATCTACCTACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCATATCTTCAAGGGGAGGTACATTTAGGGCAATCTACCTACT  50

seq1  ACCTATAATTTTACCTTTTATATTAAGGTAGGATCTCCCAAAATTGTTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTATAATTTTACCTTTTATATTAAGGTAGGATCTCCCAAAATTGTTCA  100

seq1  GAATATCTTTGAATACAATCTGTAGCTCAGGCTAACTTTGAATTTGTGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATCTTTGAATACAATCTGTAGCTCAGGCTAACTTTGAATTTGTGAT  150

seq1  CATCCTACCTCAACTTTCTGAGTAAGTGGTACTGTATGGCTGTCCAACGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTACCTCAACTTTCTGAGTAAGTGGTACTGTATGGCTGTCCAACGA  200

seq1  GGCCTGGCTTCTGAAAAAGTTTTATTAACATTTTATGCATTCCCATATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTGGCTTCTGAAAAAGTTTTATTAACATTTTATGCATTCCCATATTT  250

seq1  TAAGATATTTGGTTTGTTTCTGAGTAGAAACAGGGGTTATATTAATTGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATATTTGGTTTGTTTCTGAGTAGAAACAGGGGTTATATTAATTGTT  300

seq1  TATGTAAGCTGGCGTGTTTAGTTGTCATAAGTGATATATTGTTGAAATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTAAGCTGGCGTGTTTAGTTGTCATAAGTGATATATTGTTGAAATTT  350

seq1  ATCTTTTGATAATAATAAGTTCATTGTTTAACAATAATCATTTCAACCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTTGATAATAATAAGTTCATTGTTTAACAATAATCATTTCAACCAG  400

seq1  TGGTTTTTAAGGCTCACTGTAAAAATAATCTTTGTTTTATTTCTCCAAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTTTAAGGCTCACTGTAAAAATAATCTTTGTTTTATTTCTCCAAGA  450

seq1  AAGAATCTAAAATGTAGAGTCATTGGATAGAAGTGAGTGAACTCTATCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATCTAAAATGTAGAGTCATTGGATAGAAGTGAGTGAACTCTATCAA  500

seq1  AGGCTTCCGGTACATGTTGTCACATGACTTTCCGGGATCTAGAGGAATCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTCCGGTACATGTTGTCACATGACTTTCCGGGATCTAGAGGAATCT  550

seq1  GAGAAGATTAAATAGCTGTATATGCCTGTGTAAGAAACTGCCCCAAGCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGATTAAATAGCTGTATATGCCTGTGTAAGAAACTGCCCCAAGCCT  600

seq1  CACAGCTTAAAAGAATAAATTTTGATCATCTCTCAGCTTCCCTGGGTCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCTTAAAAGAATAAATTTTGATCATCTCTCAGCTTCCCTGGGTCAG  650

seq1  CTCTTTGGGCGTGGCTCATTTGAGATCTCTCTCAGGCTGTGAGTAAGTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTGGGCGTGGCTCATTTGAGATCTCTCTCAGGCTGTGAGTAAGTTG  700

seq1  GTGGCCAGGGCCACATTTATCTCAGCATTCACTGCAGAGGACTTGTTTCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCCAGGGCCACATTTATCTCAGCATTCACTGCAGAGGACTTGTTTCC  750

seq1  ATGTTCACAGGTATAGACAGGCTTCAGGTCCTCCTTACCCCATTGGTCTC  800
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  ATGTTCACAGGTATAGACAGGCTTCATGTCCTCCTTACCCCATTGGTCTC  800

seq1  TCACAACATGGGGGCTCTCAGTATGACTTGCTTGTTCCTCTCAAGGAGAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAACATGGGGGCTCTCAGTATGACTTGCTTGTTCCTCTCAAGGAGAG  850

seq1  GAGGTAAGACAGAGAAAGTGGGCAGTACCAAGTCACATTTCATTTGGAAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTAAGACAGAGAAAGTGGGCAGTACCAAGTCACATTTCATTTGGAAG  900

seq1  GACTTTACTCATGTTTCCTCTACTGTGCTTGTCAATAGTGAGTCCTGAGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTTACTCATGTTTCCTCTACTGTGCTTGTCAATAGTGAGTCCTGAGT  950

seq1  CTAGCTCATATTGGAAGGAGGGCAAATGAGTAGACACAGCATCAGCTCAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCTCATATTGGAAGGAGGGCAAATGAGTAGACACAGCATCAGCTCAA  1000

seq1  GAAGAGAGCATCACTGGTGACCATGTGAGATGTTGC-TTACCAAAGAGCT  1049
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GAAGAGAGCATCACTGGTGACCATGTGAGATGTTGCTTTACCAAAGAGCT  1050

seq1  CAAGTATCACTG-CACCGTCCCAAGAATTAAGAAATTTTAAAAAATGTAA  1098
      |||||||||||| ||||||||  ||| ||||||||||| |||||||||||
seq2  CAAGTATCACTGCCACCGTCC--AGATTTAAGAAATTTAAAAAAATGTAA  1098

seq1  ATAATTATTTCTTAGTATAATTACTGCAGATTTTTCTTTGAATATTAAGT  1148
      || |||||||||||||||| |   ||| ||  |||||| |||||||||||
seq2  ATTATTATTTCTTAGTATACTACGTGCCGA--TTTCTTGGAATATTAAGT  1146

seq1  AAGGAATATGTGTATTG--CTCA--TTAGTTGTTT  1179
      ||||||||||||   ||  ||||   |||||||||
seq2  AAGGAATATGTGATATGCCCTCACTATAGTTGTTT  1181


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