BAC Information

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BAC

Clone NameB6Ng01-306E19
Chromosome17 (Build37)
Map Location 77,721,218 - 77,722,228
singlet/doubletsinglet
Overlap genenone
Upstream geneEG624348
Downstream geneLOC545234, LOC100043887, LOC668795, LOC383275, Crim1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-306E19.b
ACCGA099374
length1,085
definitionB6Ng01-306E19.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcccgatctttcgggactttttcaggtttgggtggtggattttttc
atcatggtttctccacgacatttgggaatatcatgtggagaaacgtctga
caatgagtttggaggatggattccctggacccattgtagaatcttgctac
tgtgcatttaacacattcactaaacagtcaaggtcaaaattacgtgatca
gactgttgtgataacacagctttaagaggaatctcagctattaacaaaga
caacagaatgacaggtagaactcaaaccctcactgcaatgaatagttaaa
tttaatacataccgtgctgtaaaatagaaaaatgatatggtctaaacccc
taattgcattgaccgtgcagtagtcaggggcaaagtggtaaagaatgaaa
acactgtattttagactctaaaatgcagaaggacatatgttctgagaact
gaattttaaaaatacattacaatttataccaaaaatagttgaggggaaga
gtgcaaaggaaatgatgattgttgtggttccttggaaacagtgagttaag
aacaggccaattaacacttgtagagtcatacttttgagagcaaaatgatt
ttgtactgtaatgaagaataagacaaaactggaaaacatggctgtaccag
aactttcaaaaaatgtggtaatttgacaaaagaaattcaagtaattaaat
gttagcatcatttttaaaagtgaacaacaaaataaatagattagagacaa
aaatgtataatgctttctaaacttcctatacttttatgtgtgaggaaaga
ttatatttaaatgataaacacaattttggaaaacagagtagaagaatatg
taaataaataaacaatccatagtaacagtggtttgtaattttgtaaggtt
agtaaaatttccaacatatgctagagcttatggaccccataaataaatga
atattttatgtattatagttagatacaatgagccttgacatgaaaaacat
aaattataaataattccaaataagtattatcaatattaagaatattagga
attaagccgaaatttgtgagaccaggttaaagatc
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_77721218_77722228
seq2: B6Ng01-306E19.b_128_1126 (reverse)

seq1  GATCTTTAACTTGGTTCCTCACAAATTTCTGCTTAATTCCTAATATTCTT  50
      |||||||||| ||||  |||||||||||| ||||||||||||||||||||
seq2  GATCTTTAACCTGGT--CTCACAAATTTCGGCTTAATTCCTAATATTCTT  48

seq1  ATAATTTATAATACTTATTTTGAATTTATTTTATAATTTTATGTTTTTCA  100
      |  ||| ||||||||||||| |||||   ||||||| |||||||||||||
seq2  AATATTGATAATACTTATTTGGAATT--ATTTATAA-TTTATGTTTTTCA  95

seq1  TTGTCATGGCCTCATTTGTATCTAAACTATAATACATAAAATATTTCATT  150
       ||||| || |||| |||||||| ||||||||||||||||||| ||||||
seq2  -TGTCAAGG-CTCA-TTGTATCT-AACTATAATACATAAAATA-TTCATT  140

seq1  TATTTTATTGGGTCCATAAAGCTCTAGCATATGTTGGAAATTTTACTAAC  200
      || ||||| |||||||| ||||||||||||||||||||||||||||||||
seq2  TA-TTTATGGGGTCCAT-AAGCTCTAGCATATGTTGGAAATTTTACTAAC  188

seq1  CTTACAAAATTACAAACCACTGTTACTATGGATTGTTTATTTATTTACAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACAAAATTACAAACCACTGTTACTATGGATTGTTTATTTATTTACAT  238

seq1  ATTCTTCTACTCTGTTTTCCAAAATTGTGTTTATCATTTAAATATAATCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTCTACTCTGTTTTCCAAAATTGTGTTTATCATTTAAATATAATCT  288

seq1  TTCCTCACACATAAAAGTATAGGAAGTTTAGAAAGCATTATACATTTTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCACACATAAAAGTATAGGAAGTTTAGAAAGCATTATACATTTTTG  338

seq1  TCTCTAATCTATTTATTTTGTTGTTCACTTTTAAAAATGATGCTAACATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTAATCTATTTATTTTGTTGTTCACTTTTAAAAATGATGCTAACATT  388

seq1  TAATTACTTGAATTTCTTTTGTCAAATTACCACATTTTTTGAAAGTTCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTACTTGAATTTCTTTTGTCAAATTACCACATTTTTTGAAAGTTCTG  438

seq1  GTACAGCCATGTTTTCCAGTTTTGTCTTATTCTTCATTACAGTACAAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAGCCATGTTTTCCAGTTTTGTCTTATTCTTCATTACAGTACAAAAT  488

seq1  CATTTTGCTCTCAAAAGTATGACTCTACAAGTGTTAATTGGCCTGTTCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTGCTCTCAAAAGTATGACTCTACAAGTGTTAATTGGCCTGTTCTT  538

seq1  AACTCACTGTTTCCAAGGAACCACAACAATCATCATTTCCTTTGCACTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCACTGTTTCCAAGGAACCACAACAATCATCATTTCCTTTGCACTCT  588

seq1  TCCCCTCAACTATTTTTGGTATAAATTGTAATGTATTTTTAAAATTCAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTCAACTATTTTTGGTATAAATTGTAATGTATTTTTAAAATTCAGT  638

seq1  TCTCAGAACATATGTCCTTCTGCATTTTAGAGTCTAAAATACAGTGTTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGAACATATGTCCTTCTGCATTTTAGAGTCTAAAATACAGTGTTTT  688

seq1  CATTCTTTACCACTTTGCCCCTGACTACTGCACGGTCAATGCAATTAGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTTTACCACTTTGCCCCTGACTACTGCACGGTCAATGCAATTAGGG  738

seq1  GTTTAGACCATATCATTTTTCTATTTTACAGCACGGTATGTATTAAATTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAGACCATATCATTTTTCTATTTTACAGCACGGTATGTATTAAATTT  788

seq1  AACTATTCATTGCAGTGAGGGTTTGAGTTCTACCTGTCATTCTGTTGTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATTCATTGCAGTGAGGGTTTGAGTTCTACCTGTCATTCTGTTGTCT  838

seq1  TTGTTAATAGCTGAGATTCCTCTTAAAGCTGTGTTATCACAACAGTCTGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTAATAGCTGAGATTCCTCTTAAAGCTGTGTTATCACAACAGTCTGA  888

seq1  TCACGTAATTTTGACCTTGACTGTTTAGTGAATGTGTTAAATGCACAGTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACGTAATTTTGACCTTGACTGTTTAGTGAATGTGTTAAATGCACAGTA  938

seq1  GCAAGATTCTACAATGGGGTCAGGGTAAAAATCCTCCATACTCATTGTCA  1000
      ||||||||||||||||||  ||||| |   |||||||| |||||||||||
seq2  GCAAGATTCTACAATGGGTCCAGGGAATCCATCCTCCAAACTCATTGTCA  988

seq1  AATGTTTCTCC  1011
       | ||||||||
seq2  GACGTTTCTCC  999