BAC Information

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BAC

Clone NameB6Ng01-306I01
Chromosome17 (Build37)
Map Location 60,460,762 - 60,461,751
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043537, LOC100043542
Downstream geneLOC100043549
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-306I01.bB6Ng01-306I01.g
ACCGA099521GA099522
length993832
definitionB6Ng01-306I01.b B6Ng01-306I01.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagtcccattcaaatttttaaaatgagagcagaatatagcttgac
aatttcccataataatgtccttcactccagttccttattgtgctgagacc
taatttgtacaggctctactgcctaaatttctattggcacattggcctta
taagacttctctagattatggcaacaagtgttccatgtttccccataaag
caattccaaacacccatgattcccctgaacaggtgtatcacatcagaaat
ctcagatgttcaagttttatattattcttttctctcactatgataacata
tcttaagggagtcacatagggagtaaggttcattttggttcacagtctgg
gtgggtaagtttgggagggcatggtagcaggggtaaattttaggcagttg
aggcatgaggtacttggtcacattgcattggccgttagcaagtggagtac
tgatgtctgctcttgtatctctaatctctcagctgtgctccatacaaaac
atttctaagcttcccaaacagtacaacaggtgaatttgtagagctgaatg
cacaaagttatgagaacacctcatattcaaactgtaacaaaaagtatttg
taccattctttcttaaatatacgaatgaattaataaataaataagcaaat
agatgaaaaatatgtgattcaattagaagctagagagtccctgaagaact
caaaaaacaatccccatttctttgaagtttaagtttctcacaatcagaag
actttgacatttgaaaaagtgaatgagatcagctactataggccataggt
ctaaaattggaagctaatgtcaggagctagaatcccatgtcacgcaaaac
tgcacatggggaaaatctagttatgctcagtgtctatgggaagaatgaat
aaatgaatttgagagggtattacttaagggagcatattaatttaggtagg
agttttccagaaattcagcctcttaatagacctttgaaaggct

gaattcaagaagttagagtctaaaaattaaaaaaaaataaacaattaaaa
atgtggtacagagcaaaggagaattttttgcagaggattctagaatggct
gacaagcacttgagcaaatattcaaatcgaattaacgcagagattccacc
atatactaatcagaatgaataagatcaaaacctcaagtgacaatacaagc
tggagaggatgtgggagaaaggaacactcttcccttgctgatgaggttac
aaacttatacaaccactctagaaatcaatctgtaggttcctcagaaaact
ggaaataaccctatctgaagacctagctataccattcttggacatatacc
caaaagacgattataccacaaggacatgtgctacactatttgtaatagcc
ttaatggtaatagccagaaatggccaacaaaccagatgtcccttaatgaa
agaatagatagagaaagtatggttcatttacacaatggaataccattcag
ctattacaaacaagggcatcaatgaatttttcaggcaaatgcatgtaact
agaaaatttcacactgagtgtggtaacccagacctaaaatgacatgcatg
gtatatgtattcactgttaagtgggtattagtcaaaaagtatagaatact
catgacacaactcaaagatcatatgaagtttaagaagaaggaaagtccaa
gtgagtatgtctcaattccatttataaggaaaaacaaaaaaatactggaa
agcaaggaagggaaaagaccaagttatgaaatgacaggaggaaaaagaaa
agggtatgaaggaataggtaatgggggggaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_60460762_60461751
seq2: B6Ng01-306I01.b_47_1039 (reverse)

seq1  AGCCTTCAAAAGTTCTATTAAGATGCTGAATTTCTGGAAAACT-CTACCT  49
      ||||||  |||| |||||||||| ||||||||||||||||||| ||||||
seq2  AGCCTTTCAAAGGTCTATTAAGAGGCTGAATTTCTGGAAAACTCCTACCT  50

seq1  AAATT-ATATGCT-CCTTAAGTAATACCCTCTC-AATTCATTTTATTTCA  96
      ||||| ||||||| ||||||||||||||||||| |||||||||   ||||
seq2  AAATTAATATGCTCCCTTAAGTAATACCCTCTCAAATTCATTT--ATTCA  98

seq1  TTCTT-CCATAGACACTGAGCATAACTAGATTTTCCCCATGTGCAGTTTT  145
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCCCATAGACACTGAGCATAACTAGATTTTCCCCATGTGCAGTTTT  148

seq1  GCGTGACATGGGATTCTAGCTCCTGACATTAGCTTCCAATTTTAGACCTA  195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTGACATGGGATTCTAGCTCCTGACATTAGCTTCCAATTTTAGACCTA  198

seq1  TGGCCTATAGTAGCTGATCTCATTCACTTTTTCAAATGTCAAAGTCTTCT  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCTATAGTAGCTGATCTCATTCACTTTTTCAAATGTCAAAGTCTTCT  248

seq1  GATTGTGAGAAACTTAAACTTCAAAGAAATGGGGATTGTTTTTTGAGTTC  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGTGAGAAACTTAAACTTCAAAGAAATGGGGATTGTTTTTTGAGTTC  298

seq1  TTCAGGGACTCTCTAGCTTCTAATTGAATCACATATTTTTCATCTATTTG  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGGGACTCTCTAGCTTCTAATTGAATCACATATTTTTCATCTATTTG  348

seq1  CTTATTTATTTATTAATTCATTCGTATATTTAAGAAAGAATGGTACAAAT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTTATTTATTAATTCATTCGTATATTTAAGAAAGAATGGTACAAAT  398

seq1  ACTTTTTGTTACAGTTTGAATATGAGGTGTTCTCATAACTTTGTGCATTC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTTGTTACAGTTTGAATATGAGGTGTTCTCATAACTTTGTGCATTC  448

seq1  AGCTCTACAAATTCACCTGTTGTACTGTTTGGGAAGCTTAGAAATGTTTT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTACAAATTCACCTGTTGTACTGTTTGGGAAGCTTAGAAATGTTTT  498

seq1  GTATGGAGCACAGCTGAGAGATTAGAGATACAAGAGCAGACATCAGTACT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGGAGCACAGCTGAGAGATTAGAGATACAAGAGCAGACATCAGTACT  548

seq1  CCACTTGCTAACGGCCAATGCAATGTGACCAAGTACCTCATGCCTCAACT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTTGCTAACGGCCAATGCAATGTGACCAAGTACCTCATGCCTCAACT  598

seq1  GCCTAAAATTTACCCCTGCTACCATGCCCTCCCAAACTTACCCACCCAGA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTAAAATTTACCCCTGCTACCATGCCCTCCCAAACTTACCCACCCAGA  648

seq1  CTGTGAACCAAAATGAACCTTACTCCCTATGTGACTCCCTTAAGATATGT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGAACCAAAATGAACCTTACTCCCTATGTGACTCCCTTAAGATATGT  698

seq1  TATCATAGTGAGAGAAAAGAATAATATAAAACTTGAACATCTGAGATTTC  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATAGTGAGAGAAAAGAATAATATAAAACTTGAACATCTGAGATTTC  748

seq1  TGATGTGATACACCTGTTCAGGGGAATCATGGGTGTTTGGAATTGCTTTA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTGATACACCTGTTCAGGGGAATCATGGGTGTTTGGAATTGCTTTA  798

seq1  TGGGGAAACATGGAACACTTGTTGCCATAATCTAGAGAAGTCTTATAAGG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGAAACATGGAACACTTGTTGCCATAATCTAGAGAAGTCTTATAAGG  848

seq1  CCAATGTGCCAATAGAAATTTAGGCAGTAGAGCCTGTACAAATTAGGTCT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATGTGCCAATAGAAATTTAGGCAGTAGAGCCTGTACAAATTAGGTCT  898

seq1  CAGCACAATAAGGAACTGGAGTGAAGGACATTATTATGGGAAATTGTCAA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCACAATAAGGAACTGGAGTGAAGGACATTATTATGGGAAATTGTCAA  948

seq1  GCTATATTCTGCTCTCATTTTAAAAATTTGAATGGGACTGAATTC  990
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATATTCTGCTCTCATTTTAAAAATTTGAATGGGACTGAATTC  993


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