BAC Information

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BAC

Clone NameB6Ng01-306K10
Chromosome17 (Build37)
Map Location 37,713,784 - 37,839,003
singlet/doubletdoublet
Overlap geneOlfr114, Olfr115, Olfr116, Olfr117, Olfr118, Olfr119
Upstream geneH2-M9, LOC620340, H2-M1, LOC667912, LOC100043158, LOC667915, H2-M10.5, H2-M10.6, Trim26, Trim15, Trim10, LOC100043164, Trim40, Trim31, Ppp1r11, Znrd1, 1700022C21Rik, H2-M6-ps, 2410137M14Rik, H2-M4-ps, D130003B22Rik, Zfp57, Mog, Gabbr1, Olfr90, Olfr91, Olfr92, EG224763, LOC667973, Olfr93, Olfr753-ps1, LOC630355, Ubd, Olfr94, Olfr95, Olfr96, Olfr97, Olfr754-ps1, Olfr98, H2-M3, Olfr755-ps1, Olfr99, Olfr756-ps1, Olfr101, Olfr102, Olfr103, Olfr104, GA_x5J8B7W5KGR-1115818-1115257, Olfr105, Olfr758-ps1, Olfr106, Olfr107, Olfr759-ps1, Olfr108, Olfr760-ps1, Olfr109, H2-M2, Olfr110, Olfr111, Olfr112, Olfr113
Downstream geneScocp, Olfr120, Olfr1558-ps1, Olfr121, Olfr122, Olfr123, Olfr124, Olfr125, LOC672822, Olfr126, Olfr127, Olfr128, Ppia-ps17_697.1, Olfr761, Olfr1552-ps1, LOC100043265, Olfr129, Olfr130, Olfr131, Olfr132, Olfr133, Olfr134, Olfr135, Olfr138, Olfr137, Olfr762-ps1, Olfr136, LOC626985
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-306K10.bB6Ng01-306K10.g
ACCGA099624GA099625
length1,0911,096
definitionB6Ng01-306K10.b B6Ng01-306K10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(37,837,917 - 37,839,003)(37,713,784 - 37,714,896)
sequence
gaattcagagacttgcggtatgtgccattatttaacaaaaatacaaatat
tattaaaagaagaccctttatgcagttactataaaataaagagtcatatg
agatatgtctaaataaagagcagaaaggatagggacaacaagtcttgaat
ttgcaagacttctaagatataaatttgcatttagattaacatctgagaat
taaacataacagaaaatctctcacattgtactctttacttggattgatta
gtattttatattacttcagaatcagcagttagaaaatacagctgactata
gaggtaccttcaaaattacaaaaagactcaacataaggcagacaaaagaa
tgtaccagtttgtatttgtttcatctgattcattgtaaattctcattacc
cagcagctctgcaaggttctgttacctatttattgccagaggtttcttca
gactcagtgtttttctcagtgctgcctttacttccttgttccttaagcta
tagatgatggggttcagcatggatgtcaccgctgtgtagaaaagggccaa
gagtttgtccattcctggtgagtggctagacttgggcctcaagtaagtaa
tagatgctgagccatagaacattgtgactacaagtagatgggaggaacag
gtggagagagctttatggcgcccctcaggtgaaggcatcaccagcactgc
aaccaaaattctgacataggaataaatgatcaacaaaaatgggctagata
tgcagagaactgctgccacaaaaattgcagcctcattttgggatgtatct
ccacaggcaagtgccaggacaggtgggaaggtcacagaagaagtgatcta
tctcacagggtccacaaaactccaaggagaaaataaattgggtttgtccc
aaccctactatacatcccattccccatgaaactattgccaaatgggcaca
taccccactactcattcgtgttggatagtgaagtgggggagcatatgggc
catgcagcggtcataagccatagctgccagtagacagcactcagttatac
caaaaaatgtgaagaaaaacattctgttgtgcacaaccctc
gaattcaaaccagtgtttgcttcacagaaaaatcctccatctataggaaa
atattactgttaaataaaatagataacttttgttttatctgatacaactt
ttgtgttggaaagcctcttgtatcctgatttgtgtacctcaatcataact
tgaatttctttctagaattctgtcatactgtttaatttcttcaacacgtt
atatacacaatagaaatcagagcaaatcaaggtctcacttatgtttctca
gggttttctttttttcaaattcgttgatttgatagtaattttctttgagg
ttggtaaaatgataaacatttataactattgttcataataaattttatat
tggttcatttaaattaaaatttcaattgataattaaaatgagttaattta
atattaatatattaatctgttaaatcaaacaaatacaatgagaattgaga
aagatgaataatattgatcatttgtttaaatgagacaggagacatgtttg
ggtcctttctaaaataggtgtcccttgctccacacagatagtttaatcag
cttgcagataagcattttaatagaaaaacattaagtgttcatagctggtc
tcatgtttatatgaattttaaaatcagtttgttttcaataaggttcccta
gcttccttgttataatgatagccttgcttttccaaactaaggttgtaagg
ttgtgttagaacttccataaaatacctttctgtatccaagttcagaaaat
cactctaggatgacttgttatgtatgtggctctccaagctgatcaatagt
ttctcatatttcttgtccatggttgcccacttttaaatcatattatgatc
ctagagaacaaatgtggtgagctatctttttgagagagggatggaaattg
gaggttcattctcttttgaaatgggaattgtgacttaaacaaattacttc
atttactctgacccatgtcactggacatgagttctaaaatttccacacag
ctggtgattgttttgagatctggggttagtgtctatctcagtggattcag
tccttagtgaccttggaatctcgagggcttgataagctcagactct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_37837917_37839003
seq2: B6Ng01-306K10.b_46_1136 (reverse)

seq1  GAGGGTTGTGCCACACAG-ATGTTTTTCTTCACATTTTTTGGTATAACTG  49
      |||||||||||   |||| |||||||||||||||||||||||||||||||
seq2  GAGGGTTGTGCACAACAGAATGTTTTTCTTCACATTTTTTGGTATAACTG  50

seq1  AGTGCTGTCTACTGGCAGCTATGGCTTATGACCGCTGCATGG-CCATATG  98
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AGTGCTGTCTACTGGCAGCTATGGCTTATGACCGCTGCATGGCCCATATG  100

seq1  CT-CCCCACTTCACTATCCAACACGAATGAGTAGTGGGGTATGTGCCCAT  147
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCCACTTCACTATCCAACACGAATGAGTAGTGGGGTATGTGCCCAT  150

seq1  TTGGCAATAGTTTCATGGGGAATGGGATGTATAGTAGGGTTGGGACAAAC  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCAATAGTTTCATGGGGAATGGGATGTATAGTAGGGTTGGGACAAAC  200

seq1  CAATTTTATTTTCTCCTTGGAGTTTTGTGGACCCTGTGAGATAGATCACT  247
      | | ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATTTATTTTCTCCTTGGAGTTTTGTGGACCCTGTGAGATAGATCACT  250

seq1  TCTTCTGTGACCTT-CCACCTGTCCTGGCACTTGCCTGTGGAGATACATC  296
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TCTTCTGTGACCTTCCCACCTGTCCTGGCACTTGCCTGTGGAGATACATC  300

seq1  CCAAAATGAGGCTGCAATTTTTGTGGCAGCAGTTCTCTGCATATCTAGCC  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAATGAGGCTGCAATTTTTGTGGCAGCAGTTCTCTGCATATCTAGCC  350

seq1  CATTTTTGTTGATCATTTATTCCTATGTCAGAATTTTGGTTGCAGTGCTG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTTGTTGATCATTTATTCCTATGTCAGAATTTTGGTTGCAGTGCTG  400

seq1  GTGATGCCTTCACCTGAGGGGCGCCATAAAGCTCTCTCCACCTGTTCCTC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATGCCTTCACCTGAGGGGCGCCATAAAGCTCTCTCCACCTGTTCCTC  450

seq1  CCATCTACTTGTAGTCACAATGTTCTATGGCTCAGCATCTATTACTTACT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTACTTGTAGTCACAATGTTCTATGGCTCAGCATCTATTACTTACT  500

seq1  TGAGGCCCAAGTCTAGCCACTCACCAGGAATGGACAAACTCTTGGCCCTT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCCCAAGTCTAGCCACTCACCAGGAATGGACAAACTCTTGGCCCTT  550

seq1  TTCTACACAGCGGTGACATCCATGCTGAACCCCATCATCTATAGCTTAAG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACACAGCGGTGACATCCATGCTGAACCCCATCATCTATAGCTTAAG  600

seq1  GAACAAGGAAGTAAAGGCAGCACTGAGAAAAACACTGAGTCTGAAGAAAC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAAGGAAGTAAAGGCAGCACTGAGAAAAACACTGAGTCTGAAGAAAC  650

seq1  CTCTGGCAATAAATAGGTAACAGAACCTTGCAGAGCTGCTGGGTAATGAG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGCAATAAATAGGTAACAGAACCTTGCAGAGCTGCTGGGTAATGAG  700

seq1  AATTTACAATGAATCAGATGAAACAAATACAAACTGGTACATTCTTTTGT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTACAATGAATCAGATGAAACAAATACAAACTGGTACATTCTTTTGT  750

seq1  CTGCCTTATGTTGAGTCTTTTTGTAATTTTGAAGGTACCTCTATAGTCAG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTTATGTTGAGTCTTTTTGTAATTTTGAAGGTACCTCTATAGTCAG  800

seq1  CTGTATTTTCTAACTGCTGATTCTGAAGTAATATAAAATACTAATCAATC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATTTTCTAACTGCTGATTCTGAAGTAATATAAAATACTAATCAATC  850

seq1  CAAGTAAAGAGTACAATGTGAGAGATTTTCTGTTATGTTTAATTCTCAGA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTAAAGAGTACAATGTGAGAGATTTTCTGTTATGTTTAATTCTCAGA  900

seq1  TGTTAATCTAAATGCAAATTTATATCTTAGAAGTCTTGCAAATTCAAGAC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAATCTAAATGCAAATTTATATCTTAGAAGTCTTGCAAATTCAAGAC  950

seq1  TTGTTGTCCCTATCCTTTCTGCTCTTTATTTAGACATATCTCATATGACT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGTCCCTATCCTTTCTGCTCTTTATTTAGACATATCTCATATGACT  1000

seq1  CTTTATTTTATAGTAACTGCATAAAGGGTCTTCTTTTAATAATATTTGTA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATTTTATAGTAACTGCATAAAGGGTCTTCTTTTAATAATATTTGTA  1050

seq1  TTTTTGTTAAATAATGGCACATACCGCAAGTCTCTGAATTC  1087
      |||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTTAAATAATGGCACATACCGCAAGTCTCTGAATTC  1091

seq1: chr17_37713784_37714896
seq2: B6Ng01-306K10.g_65_1160

seq1  GAATTCAAACCAGTGTTTGCTTCACAGAAAAATCCTCCATCTATAGGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAACCAGTGTTTGCTTCACAGAAAAATCCTCCATCTATAGGAAA  50

seq1  ATATTACTGTTAAATAAAATAGATAACTTTTGTTTTATCTGATACAACTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTACTGTTAAATAAAATAGATAACTTTTGTTTTATCTGATACAACTT  100

seq1  TTGTGTTGGAAAGCCTCTTGTATCCTGATTTGTGTACCTCAATCATAACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTTGGAAAGCCTCTTGTATCCTGATTTGTGTACCTCAATCATAACT  150

seq1  TGAATTTCTTTCTAGAATTCTGTCATACTGTTTAATTTCTTCAACACGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTTCTTTCTAGAATTCTGTCATACTGTTTAATTTCTTCAACACGTT  200

seq1  ATATACACAATAGAAATCAGAGCAAATCAAGGTCTCACTTATGTTTCTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACACAATAGAAATCAGAGCAAATCAAGGTCTCACTTATGTTTCTCA  250

seq1  GGGTTTTCTTTTTTTCAAATTCGTTGATTTGATAGTAATTTTCTTTGAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTTCTTTTTTTCAAATTCGTTGATTTGATAGTAATTTTCTTTGAGG  300

seq1  TTGGTAAAATGATAAACATTTATAACTATTGTTCATAATAAATTTTATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTAAAATGATAAACATTTATAACTATTGTTCATAATAAATTTTATAT  350

seq1  TGGTTCATTTAAATTAAAATTTCAATTGATAATTAAAATGAGTTAATTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTCATTTAAATTAAAATTTCAATTGATAATTAAAATGAGTTAATTTA  400

seq1  ATATTAATATATTAATCTGTTAAATCAAACAAATACAATGAGAATTGAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTAATATATTAATCTGTTAAATCAAACAAATACAATGAGAATTGAGA  450

seq1  AAGATGAATAATATTGATCATTTGTTTAAATGAGACAGGAGACATGTTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGAATAATATTGATCATTTGTTTAAATGAGACAGGAGACATGTTTG  500

seq1  GGTCCTTTCTAAAATAGGTGTCCCTTGCTCCACACAGATAGTTTAATCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCTTTCTAAAATAGGTGTCCCTTGCTCCACACAGATAGTTTAATCAG  550

seq1  CTTGCAGATAAGCATTTTAATAGAAAAACATTAAGTGTTCATAGCTGGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCAGATAAGCATTTTAATAGAAAAACATTAAGTGTTCATAGCTGGTC  600

seq1  TCATGTTTATATGAATTTTAAAATCAGTTTGTTTTCAATAAGGTTCCCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTTTATATGAATTTTAAAATCAGTTTGTTTTCAATAAGGTTCCCTA  650

seq1  GCTTCCTTGTTATAATGATAGCCTTGCTTTTCCAAACTAAGGTTGTAAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCTTGTTATAATGATAGCCTTGCTTTTCCAAACTAAGGTTGTAAGG  700

seq1  TTGTGTTAGAACTTCCATAAAATACCTTTCTGTATCCAAGTTCAGAAAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTTAGAACTTCCATAAAATACCTTTCTGTATCCAAGTTCAGAAAAT  750

seq1  CACTCTAGGATGACTTGTTATGTATGTGGCTCTCCAAGCTGATCAATAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTAGGATGACTTGTTATGTATGTGGCTCTCCAAGCTGATCAATAGT  800

seq1  TTCTCATATTTCTTGTCCATGGTTGCCCACTTTTAAATCATATTATGATC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCATATTTCTTGTCCATGGTTGCCCACTTTTAAATCATATTATGATC  850

seq1  CTAGAGAACAAATGTGGTGAGCTATCTTTTTGAGGAGAGGGGATGG-AAT  899
      ||||||||||||||||||||||||||||||||| |||| ||||||| |||
seq2  CTAGAGAACAAATGTGGTGAGCTATCTTTTTGA-GAGA-GGGATGGAAAT  898

seq1  TGGAGGTTCATTCTCTTTTGAAATGGAAATGTGGACTTAAACAAATTACT  949
      |||||||||||||||||||||||||| |||   |||||||||||||||||
seq2  TGGAGGTTCATTCTCTTTTGAAATGGGAATTGTGACTTAAACAAATTACT  948

seq1  TCATTTACTCTGACCCCATGTCACCTGGGACATGGAGTTCCTAAAATTTC  999
      ||||||||||||| ||||||||||   |||||| ||||| ||||||||||
seq2  TCATTTACTCTGA-CCCATGTCAC--TGGACAT-GAGTT-CTAAAATTTC  993

seq1  CACACAGCTGTTGAATTGTTTTGAGATCTTGGGGTTTAGTTGTCCTATCT  1049
      |||||||||| || |||||||||||||||  ||| |||| ||| ||||||
seq2  CACACAGCTGGTG-ATTGTTTTGAGATCT--GGGGTTAG-TGT-CTATCT  1038

seq1  CAGTGGTTTTCAGTCCTTAGTAGACCTGTGAATCTCCAGAGGGCTGATTA  1099
      ||||||  ||||||||||||| |||||  |||||||  |||||||   ||
seq2  CAGTGG-ATTCAGTCCTTAGT-GACCTTGGAATCTC--GAGGGCTTGATA  1084

seq1  GAGCTCAGAACTCT  1113
       ||||||| |||||
seq2  -AGCTCAG-ACTCT  1096