BAC Information

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BAC

Clone NameB6Ng01-307F03
Chromosome17 (Build37)
Map Location 69,943,021 - 70,033,362
singlet/doubletdoublet
Overlap genenone
Upstream geneEG622645, Epb4.1l3, 2410021H03Rik, Zfp161, C030034I22Rik, A930029G22Rik, A330050F15Rik, LOC100043623, LOC668720, LOC673535
Downstream geneLOC100043630, LOC623112, LOC623143, Dlgap1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-307F03.bB6Ng01-307F03.g
ACCGA100122GA100123
length1,0761,104
definitionB6Ng01-307F03.b B6Ng01-307F03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(70,032,289 - 70,033,362)(69,943,021 - 69,943,947)
sequence
gaattcatgcattgaattcaactgctgtgacagcaatggatgccctttgt
ttttagctcactgctacaggaaagccgttttcctgctctgccttctactc
ttctccctatgatctcaggctaacagaaatctgacagcaaaggacacctg
tggcaggcagtactgcagcactggcaaagctcggaactgagggggcaaag
attttagaacacagcaatgatggcttacaaagtgtggtactgcaaagcaa
agagaaagtgccatgagagaggttacaccgtgagggatgtgggattcccg
gaaggaagcaccctgtctgacaagtcaaggtccacatcctagaggaggta
gactgtgcctctctaggccttaaagaattgtctgaacagagttttctgct
tcctcctcctctgctgccctttgcccctcatctatttcaacaaccataga
gaagtgaaggattgaaaactgttctgctgtatccaaggcttctatgaatg
tggcatgcagtcagctaacacgttttctcaaggaatctccacaagatcaa
ccactgccacaagagctgttctttctcacaccagtctgtggcttgcctct
gaagacttgagcttggaagcttcttgtaaaccctggatatttgaatggaa
acacaatgaacatcagttgcacagtcttgaggatgctgggtaggacccgc
aattacccaggatgcacaagtaccagtccctgcctacagcctcctaccgc
aatctggagagagttctcacttcacgttactaaactgaggagaaatcaac
aaacagaatgtggcaaatgctaaatgaaacggcaaaatgccttctcactt
taagatggaagtaaaacgtcactgtagcccattttactctagaaagacac
cactagaggaaatatttttgcaagaactccataagaatgtaaacaagaaa
gagaaaaatttggggttcaggatgaaatgtcctgacatctcccctgtaag
aaaaacagaaaacccagagcaagaggcaatcatcagcttttcttttcctt
caatatcgtaacatgtgatgtgtgtg
gaattccaagcccaaggtcttgctaaggacgaactaggactgttggaaca
ctggcggatggctttagctatgtcagaattcaatcttaaaaggcacttat
gataggaaaatattgaaagatagcacgtggatccatacactagactaacg
ccagaatggaactcgggaatgaaaaattactgtatgggtagggaacgcta
gactccaggaggagagcttccttgaaactcttttgcctcataagtgactt
ttaagcctctcggcttgtccagttgactcggccagagagcgtagcagcat
tgtatgagtcaaggtgctctagagaaacagaagtgatagaatgaatctct
ctccctcttttgctctaatggataatgtataatatatacatatacaggcc
atggtctggctagtccaacaatgctaggaagtgtgttcagggcacaaagc
tgaatggctcagctgatctacagtcagtgctggaatcccaaagaagttaa
gttccaacaccagtaaagaaacgtctcagcagcgggatggatgaacctgc
cagcgagagtgagggcgagcaggcaaaagcaaaagctttcttcctccatg
ttcttctaccgggctgccacaggagatgaggtcttctgcctcaaatggtc
caatgaagaacaatccccatgcaagtgtgtccagccccgggcaggtgtgc
ccagccttgtgcaagtatgtccagccttgtgcaggtgtacccagccccat
gcaggtgtgcccagccctgtgtaggtgtgcccagtcctatgcaggtgtgc
tcagatgcctgggttttaattggtttcatatatgatcaagttgaacaact
aagatcagccatcatagatattaaaatatattgtatatttgtatgaaatt
cccaaaaagtaaaaaaaaaaacaaaaaaaccatatgtttttaaaagagaa
caacatacatttactgcatagaacaaacttaaataaattattagattgaa
aaaaagacatggatggagaaggtgactgtcacatatttcacaaaaatcat
gtacttgacatcttgaaaatgtgattcgatctggcttttagttttttgga
tttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_70032289_70033362
seq2: B6Ng01-307F03.b_44_1119 (reverse)

seq1  CACACACACCACATG-TACGAATATGAAGGAAAAGAAAAGCTGATGATTT  49
      |||||||| |||||| |||||   ||||||||||||||||||||||| ||
seq2  CACACACATCACATGTTACGATATTGAAGGAAAAGAAAAGCTGATGA-TT  49

seq1  GCCTCTTTGCTCT-GGTTTTCTG-TTTTCTTACAGGGGAGATGTCAGGAC  97
      ||||| ||||||| ||||||||| ||||||||||||||||||||||||||
seq2  GCCTC-TTGCTCTGGGTTTTCTGTTTTTCTTACAGGGGAGATGTCAGGAC  98

seq1  ATTTCATCCTGAACCCCAAATTTTTCTCTTTCTTGTTTACATTCTTATGG  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCATCCTGAACCCCAAATTTTTCTCTTTCTTGTTTACATTCTTATGG  148

seq1  AGTTCTTGC-AAAATATTTCCTCTAGTGGTGTCTTTCTAGAGTAAAATGG  196
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTTGCAAAAATATTTCCTCTAGTGGTGTCTTTCTAGAGTAAAATGG  198

seq1  GCTACAGTGACGTTTTACTTCCATCTTAAAGTGAGAAGGCATTTTGCCGT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACAGTGACGTTTTACTTCCATCTTAAAGTGAGAAGGCATTTTGCCGT  248

seq1  TTCATTTAGCATTTGCCACATTCTGTTTGTTGATTTCTCCTCAGTTTAGT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTTAGCATTTGCCACATTCTGTTTGTTGATTTCTCCTCAGTTTAGT  298

seq1  AACGTGAAGTGAGAACTCTCTCCAGATTGCGGTAGGAGGCTGTAGGCAGG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGTGAAGTGAGAACTCTCTCCAGATTGCGGTAGGAGGCTGTAGGCAGG  348

seq1  GACTGGTACTTGTGCATCCTGGGTAATTGCGGGTCCTACCCAGCATCCTC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGGTACTTGTGCATCCTGGGTAATTGCGGGTCCTACCCAGCATCCTC  398

seq1  AAGACTGTGCAACTGATGTTCATTGTGTTTCCATTCAAATATCCAGGGTT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTGTGCAACTGATGTTCATTGTGTTTCCATTCAAATATCCAGGGTT  448

seq1  TACAAGAAGCTTCCAAGCTCAAGTCTTCAGAGGCAAGCCACAGACTGGTG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAGAAGCTTCCAAGCTCAAGTCTTCAGAGGCAAGCCACAGACTGGTG  498

seq1  TGAGAAAGAACAGCTCTTGTGGCAGTGGTTGATCTTGTGGAGATTCCTTG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAAGAACAGCTCTTGTGGCAGTGGTTGATCTTGTGGAGATTCCTTG  548

seq1  AGAAAACGTGTTAGCTGACTGCATGCCACATTCATAGAAGCCTTGGATAC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAACGTGTTAGCTGACTGCATGCCACATTCATAGAAGCCTTGGATAC  598

seq1  AGCAGAACAGTTTTCAATCCTTCACTTCTCTATGGTTGTTGAAATAGATG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAACAGTTTTCAATCCTTCACTTCTCTATGGTTGTTGAAATAGATG  648

seq1  AGGGGCAAAGGGCAGCAGAGGAGGAGGAAGCAGAAAACTCTGTTCAGACA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGCAAAGGGCAGCAGAGGAGGAGGAAGCAGAAAACTCTGTTCAGACA  698

seq1  ATTCTTTAAGGCCTAGAGAGGCACAGTCTACCTCCTCTAGGATGTGGACC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTTAAGGCCTAGAGAGGCACAGTCTACCTCCTCTAGGATGTGGACC  748

seq1  TTGACTTGTCAGACAGGGTGCTTCCTTCCGGGAATCCCACATCCCTCACG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACTTGTCAGACAGGGTGCTTCCTTCCGGGAATCCCACATCCCTCACG  798

seq1  GTGTAACCTCTCTCATGGCACTTTCTCTTTGCTTTGCAGTACCACACTTT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAACCTCTCTCATGGCACTTTCTCTTTGCTTTGCAGTACCACACTTT  848

seq1  GTAAGCCATCATTGCTGTGTTCTAAAATCTTTGCCCCCTCAGTTCCGAGC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGCCATCATTGCTGTGTTCTAAAATCTTTGCCCCCTCAGTTCCGAGC  898

seq1  TTTGCCAGTGCTGCAGTACTGCCTGCCACAGGTGTCCTTTGCTGTCAGAT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCAGTGCTGCAGTACTGCCTGCCACAGGTGTCCTTTGCTGTCAGAT  948

seq1  TTCTGTTAGCCTGAGATCATAGGGAGAAGAGTAGAAGGCAGAGCAGGAAA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTTAGCCTGAGATCATAGGGAGAAGAGTAGAAGGCAGAGCAGGAAA  998

seq1  ACGGCTTTCCTGTAGCAGTGAGCTAAAAACAAAGGGCATCCATTGCTGTC  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGCTTTCCTGTAGCAGTGAGCTAAAAACAAAGGGCATCCATTGCTGTC  1048

seq1  ACAGCAGTTGAATTCAATGCATGAATTC  1074
      ||||||||||||||||||||||||||||
seq2  ACAGCAGTTGAATTCAATGCATGAATTC  1076

seq1: chr17_69943021_69943947
seq2: B6Ng01-307F03.g_250_1168

seq1  GGGTAGGGAACGCTAGACTCCAGGAGGAGAGCTTCCTTGAAACTCTTTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAGGGAACGCTAGACTCCAGGAGGAGAGCTTCCTTGAAACTCTTTTG  50

seq1  CCTCATAAGTGACTTTTAAGCCTCTCGGCTTGTCCAGTTGACTCGGCCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCATAAGTGACTTTTAAGCCTCTCGGCTTGTCCAGTTGACTCGGCCAG  100

seq1  AGAGCGTAGCAGCATTGTATGAGTCAAGGTGCTCTAGAGAAACAGAAGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCGTAGCAGCATTGTATGAGTCAAGGTGCTCTAGAGAAACAGAAGTG  150

seq1  ATAGAATGAATCTCTCTCCCTCTTTTGCTCTAATGGATAATGTATAATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAATGAATCTCTCTCCCTCTTTTGCTCTAATGGATAATGTATAATAT  200

seq1  ATACATATACAGGCCATGGTCTGGCTAGTCCAACAATGCTAGGAAGTGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATATACAGGCCATGGTCTGGCTAGTCCAACAATGCTAGGAAGTGTG  250

seq1  TTCAGGGCACAAAGCTGAATGGCTCAGCTGATCTACAGTCAGTGCTGGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGGGCACAAAGCTGAATGGCTCAGCTGATCTACAGTCAGTGCTGGAA  300

seq1  TCCCAAAGAAGTTAAGTTCCAACACCAGTAAAGAAACGTCTCAGCAGCGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAAAGAAGTTAAGTTCCAACACCAGTAAAGAAACGTCTCAGCAGCGG  350

seq1  GATGGATGAACCTGCCAGCGAGAGTGAGGGCGAGCAGGCAAAAGCAAAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGATGAACCTGCCAGCGAGAGTGAGGGCGAGCAGGCAAAAGCAAAAG  400

seq1  CTTTCTTCCTCCATGTTCTTCTACCGGGCTGCCACAGGAGATGAGGTCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTCCTCCATGTTCTTCTACCGGGCTGCCACAGGAGATGAGGTCTT  450

seq1  CTGCCTCAAATGGTCCAATGAAGAACAATCCCCATGCAAGTGTGTCCAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTCAAATGGTCCAATGAAGAACAATCCCCATGCAAGTGTGTCCAGC  500

seq1  CCCGGGCAGGTGTGCCCAGCCTTGTGCAAGTATGTCCAGCCTTGTGCAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGGGCAGGTGTGCCCAGCCTTGTGCAAGTATGTCCAGCCTTGTGCAGG  550

seq1  TGTACCCAGCCCCATGCAGGTGTGCCCAGCCCTGTGTAGGTGTGCCCAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACCCAGCCCCATGCAGGTGTGCCCAGCCCTGTGTAGGTGTGCCCAGT  600

seq1  CCTATGCAGGTGTGCTCAGATGCCTGGGTTTTAATTGGTTTCATATATGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATGCAGGTGTGCTCAGATGCCTGGGTTTTAATTGGTTTCATATATGA  650

seq1  TCAAGTTGAACAACTAAGATCAGCCATCATAGATATTAAAATATATTGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGTTGAACAACTAAGATCAGCCATCATAGATATTAAAATATATTGTA  700

seq1  TATTTGTATGAAATTCCCAAAAAGT-AAAAAAAAAACAAAAAAACCATAT  749
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TATTTGTATGAAATTCCCAAAAAGTAAAAAAAAAAACAAAAAAACCATAT  750

seq1  GTTTTTAAAAGAG-ACAACATACATTTACTGCATAAGGAACAAACTTAAA  798
      ||||||||||||| |||||||||||||||||||||  |||||||||||||
seq2  GTTTTTAAAAGAGAACAACATACATTTACTGCATA--GAACAAACTTAAA  798

seq1  TAAATTATTAGAATTGAAAAAAAGAACATGGATGGAGAAGGTGACTGTCC  848
      ||||||||||| |||||||||||| ||||||||||||||||||||||| |
seq2  TAAATTATTAG-ATTGAAAAAAAG-ACATGGATGGAGAAGGTGACTGT-C  845

seq1  ACATATTTCAC-AAAATCATGTACTTGGACAATCCTTGAAAAATTGTGAA  897
      ||||||||||| |||||||||||||| ||||   ||||||||  ||||| 
seq2  ACATATTTCACAAAAATCATGTACTT-GACA--TCTTGAAAA--TGTGAT  890

seq1  TCGGATCTGGGTTTTTAGTTTTTGGATTTG  927
      || ||||||| ||||   ||||||||||||
seq2  TC-GATCTGGCTTTTAGTTTTTTGGATTTG  919