BAC Information

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BAC

Clone NameB6Ng01-308A04
Chromosome17 (Build37)
Map Location 36,508,775 - 36,509,859
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC436493, H2-Q8, EG667662, H2-Q6, H2-Q7, EG667669, H2-Q10, Pou5f1, Tcf19, Cchcr1, Psors1c2, Cdsn, LOC674169, 2300002M23Rik, LOC672682, Dpcr1, EG433102, Vars2, Gtf2h4, Ddr1, LOC100043663, Ier3, Flot1, Tubb5, Mdc1, Nrm, 2310014H01Rik, Dhx16, 2310061I04Rik, 2610110G12Rik, Mrps18b, LOC100043673, Ppp1r10, LOC100043674, LOC667766, Abcf1, Prr3, Gna-rs1, H2-T24, H2-T23, H2-T22, EG547347, LOC667782, H2-Bl, EG667792, C920025E04Rik, H2-T10, LOC630294, LOC672718, ENSMUSG00000073403, LOC675325, LOC626268, EG667977, LOC625785, H2-T3, LOC100043127, EG667827, LOC435525, LOC677333, LOC100043134, LOC625881, Rpp21, Trim39, H2-M10.2, H2-M10.1, H2-M10.3
Downstream geneGm318, LOC100043140, LOC674152, LOC383240, LOC224752, H2-M10.4, H2-M11, LOC667896, H2-M9, LOC620340, H2-M1, LOC667912, LOC100043158, LOC667915, H2-M10.5, H2-M10.6, Trim26, Trim15, Trim10, LOC100043164, Trim40, Trim31, Ppp1r11, Znrd1, 1700022C21Rik, H2-M6-ps, 2410137M14Rik, H2-M4-ps, D130003B22Rik, Zfp57, Mog, Gabbr1, Olfr90, Olfr91, Olfr92, EG224763, LOC667973, Olfr93, Olfr753-ps1, LOC630355, Ubd, Olfr94, Olfr95, Olfr96, Olfr97, Olfr754-ps1, Olfr98, H2-M3, Olfr755-ps1, Olfr99, Olfr756-ps1, Olfr101, Olfr102, Olfr103, Olfr104
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-308A04.bB6Ng01-308A04.g
ACCGA100624GA100625
length1,1961,096
definitionB6Ng01-308A04.b B6Ng01-308A04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcactggtcttaccacattccccatcatcctgaagcagctgggctg
atagaaagatggaatggccttttgaagacgcagttacagcaccaattagg
tggtaacagcttggaaggctggggcagagttcttcagaaggcagtatatg
ctttgaatcagcgctccatatatggtacagtttcacccatagccaggatt
catgggtccaggaatcaaggggtggaaaacggaatagttccacttactat
cactcctagtgaccctctaggaaaatttttgcttcctgtccccataactc
taggttctgctggcctagaagttttggctccagagaggggagtgcttcta
ccaggagctacaacaaacatttcattgaactggaagctcagacttccccc
tggtcattttgggcttctaatgcccttaaaccaacacgctaaaaaaggaa
taacagtgttaggaggggtgatagatccagattaccatggggaaattgga
ttacctcttcacaatggtggtaagcaagattatgtctggagtgcaggaga
tcccttagggcgtctcttagtactaccatgtcctgtgattaaagtcaatg
ggaaactacaacagcctaatccaagcaggatgacaaaggacgcagaccca
tcaggaatgaaggtatgggtcaatcctccaggaaaagagccaagacctgc
tgaggtgctggctgaaggagaaggaaatacagaatgggtagtagaggaag
gtagttataaataccaattaaagccacgtaaccagttgcagaaacgagga
ttataaagtaatatgaatgcccattgtaaatttactaatgcgtttgcgat
tgtacgagggatagttatatcatgttaggcgtatttacagcctttgttat
tgtttcatgtgaacatgagatattatttgtgtcaagttgacaagggtgga
ttgtagtggcctattcctggttgtcaacttgacaatatttggatgaacta
catttcggaattggaaagctccacagtgaccttatctggaggctggagat
ccttaatctggatcttgcttggaagaatctgaaacatagtgctaatggat
ccagaagatgatctccgagctagggaactacctttaatctggcctagtcc
ttgcatcttgggatatatagggttcgttggacactacactatgttc
gaattcagtgtggtagaaatctgtcaggcccagagtctgcacagaccatt
gacacaggttccaagagtgtgctccctagatggcaggaagatccttacag
aggtcaggccatgtttcaaagtgggactgccaaagacatgtctagagtgt
gagcagcatctgagaactgactcatggggggtgcttagtggtgggaccac
taacttctgtggtgtcaaactgtgaaggattcctcaggggtgcagtagac
atctgggaacccaggaaggattcccaagggcatcaaggctgcaaccagca
agcaggtgagactgcattcacatccacccactcctacttcctggccctag
cattcccctgtatcggggtatagaatctttgtaagaccaacggcctttcc
tcccaatgatcgttctaccaggctgctttcttgtcacagcaggcaatata
ttcaatgcaagaatgcaggtcctaccaggacattacactttattttctgt
atcaggttttactcatgcttaatacatgaatcagccacctactatggtaa
gaaatattaaaacactagaaacatgtgtatactcaataaagaagtgtgac
attgtagttcaatgataagaaaagtttagtcagtgatggagatttctacg
tcagcctctgctgagagaggaagagatgtctgggaaacagacacaggtca
gtgtagagagaggtgagtgttgtgggctgtcctggagacattcttgtagc
aagtcccagagtctcctctatatctgtgacacagcaacaagcctctggca
aaaaacatttaatctaggcaacagctgtcctcacgcccattgtatttctg
cagggagggagctactgaggtacaggaagtctttctcattctgtgttaac
cattgcttttccatttcacaccttgcccttgcaacagctatatgagctag
gggaagctaccccatgccacagaatgcaactgtgtcatcaaggttaagat
cagacctaatagaaagatgcttcctgtgaaccacgaaagtgggcaaagga
tgctgcaactactttaggacccaagaatggatatggtaaagaaagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_36508775_36509859
seq2: B6Ng01-308A04.g_65_1160

seq1  GAATTCAGTGTGGTAGAAATCTGTCAGGCCCAGAGTCTGCACAGACCATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTGTGGTAGAAATCTGTCAGGCCCAGAGTCTGCACAGACCATT  50

seq1  GACACAGGTTCCAAGAGTGTGCTCCCTAGATGGCAGGAAGATCCTTACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACAGGTTCCAAGAGTGTGCTCCCTAGATGGCAGGAAGATCCTTACAG  100

seq1  AGGTCAGGCCATGTTTCAAAGTGGGACTGCCAAAGACATGTCTAGAGTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCAGGCCATGTTTCAAAGTGGGACTGCCAAAGACATGTCTAGAGTGT  150

seq1  GAGCAGCATCTGAGAACTGACTCATGGGGGGTGCTTAGTGGTGGGACCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGCATCTGAGAACTGACTCATGGGGGGTGCTTAGTGGTGGGACCAC  200

seq1  TAACTTCTGTGGTGTCAAACTGTGAAGGATTCCTCAGGGGTGCAGTAGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTCTGTGGTGTCAAACTGTGAAGGATTCCTCAGGGGTGCAGTAGAC  250

seq1  ATCTGGGAACCCAGGAAGGATTCCCAAGGGCATCAAGGCTGCAACCAGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGGGAACCCAGGAAGGATTCCCAAGGGCATCAAGGCTGCAACCAGCA  300

seq1  AGCAGGTGAGACTGCATTCACATCCACCCACTCCTACTTCCTGGCCCTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGTGAGACTGCATTCACATCCACCCACTCCTACTTCCTGGCCCTAG  350

seq1  CATTCCCCTGTATCGGGGTATAGAATCTTTGTAAGACCAACGGCCTTTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCCCCTGTATCGGGGTATAGAATCTTTGTAAGACCAACGGCCTTTCC  400

seq1  TCCCAATGATCGTTCTACCAGGCTGCTTTCTTGTCACAGCAGGCAATATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAATGATCGTTCTACCAGGCTGCTTTCTTGTCACAGCAGGCAATATA  450

seq1  TTCAATGCAAGAATGCAGGTCCTACCAGGACATTACACTTTATTTTCTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATGCAAGAATGCAGGTCCTACCAGGACATTACACTTTATTTTCTGT  500

seq1  ATCAGGTTTTACTCATGCTTAATACATGAATCAGCCACCTACTATGGTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGGTTTTACTCATGCTTAATACATGAATCAGCCACCTACTATGGTAA  550

seq1  GAAATATTAAAACACTAGAAACATGTGTATACTCAATAAAGAAGTGTGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATATTAAAACACTAGAAACATGTGTATACTCAATAAAGAAGTGTGAC  600

seq1  ATTGTAGTTCAATGATAAGAAAAGTTTAGTCAGTGATGGAGATTTCTACG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTAGTTCAATGATAAGAAAAGTTTAGTCAGTGATGGAGATTTCTACG  650

seq1  TCAGCCTCTGCTGAGAGAGGAAGAGATGTCTGGGAAACAGACACAGGTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCCTCTGCTGAGAGAGGAAGAGATGTCTGGGAAACAGACACAGGTCA  700

seq1  GTGTAGAGAGAGGTGAGTGTTGTGGGCTGTCCTGGAGACATTCTTGTAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAGAGAGAGGTGAGTGTTGTGGGCTGTCCTGGAGACATTCTTGTAGC  750

seq1  AAGTCCCAGAGTCTCCTCTATATCTGTGACACAGCAACAAGCCTCTGGC-  799
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AAGTCCCAGAGTCTCCTCTATATCTGTGACACAGCAACAAGCCTCTGGCA  800

seq1  AAAAACATTTAATCTAGGCAACAGCTGTCCTCACGCCCATTGTA-TTCTG  848
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  AAAAACATTTAATCTAGGCAACAGCTGTCCTCACGCCCATTGTATTTCTG  850

seq1  CAGGGAGGGAGCTACTGAGGTACAGGAAGTCTTTCTCATTCTGTGTT-AC  897
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CAGGGAGGGAGCTACTGAGGTACAGGAAGTCTTTCTCATTCTGTGTTAAC  900

seq1  CATTGC-TTTCCATTTCACACCTTGCCC-TGCAACAGCTATA-GAGCTA-  943
      |||||| ||||||||||||||||||||| ||||||||||||| |||||| 
seq2  CATTGCTTTTCCATTTCACACCTTGCCCTTGCAACAGCTATATGAGCTAG  950

seq1  GGGAAGCTACCCCATGCCACAG-ATGCAAACTGTGTCATCAAGG-TAAGA  991
      |||||||||||||||||||||| |||| |||||||||||||||| |||||
seq2  GGGAAGCTACCCCATGCCACAGAATGC-AACTGTGTCATCAAGGTTAAGA  999

seq1  TCAGACCTAATAG-AAGATGC-TCCTGTGAA-CACAGAAGTGGGCAAAGG  1038
      ||||||||||||| ||||||| ||||||||| |||  |||||||||||||
seq2  TCAGACCTAATAGAAAGATGCTTCCTGTGAACCACGAAAGTGGGCAAAGG  1049

seq1  ATGCTGCAACTAC-ATAGAACCCAAGAAATGGATATGGGTAAGAAAGC  1085
      |||||||||||||  ||| ||||||| |||||||||||  ||||||||
seq2  ATGCTGCAACTACTTTAGGACCCAAG-AATGGATATGGTAAAGAAAGC  1096