BAC Information

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BAC

Clone NameB6Ng01-310C04
Chromosome17 (Build37)
Map Location 4,425,944 - 4,427,029
singlet/doubletsinglet
Overlap genenone
Upstream geneTiam2, LOC630810, Tfb1m, Cldn20, 1700102H20Rik, Nox3, 4930470H14Rik
Downstream genePpia-ps17_26.1, Arid1b, 5730437N04Rik, Ldhal6b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-310C04.bB6Ng01-310C04.g
ACCGA102198GA102199
length1,082706
definitionB6Ng01-310C04.b B6Ng01-310C04.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactggtttagtgtcttaacagtccaggaccctgcatttttcctt
ccacactgtgatggtttgtatatgcttggcccaggcagtggcactattgg
atggtgtgaccttgctggagtaagtgtgtcactgtgggtgtgatcctcat
cctagctgcctagaagtcagtctttcactagcagtcttcagatgaagatg
tagaactctccgctcctcctgcaccatgcctgcctggctgcttccatgtt
cccaccttgatgagaatggattgaacctctgaatctataagccagcccca
atcaaatgttgtccttctaagagttgccttggtcatggtgtctttcacaa
gagtaaaaccctaactatgacacacacctgaccattttcttccttgatgg
tgtctatccagagatcacccccaatcaccgcagacctgtgtggctcctta
cgccatgggcatcaattttttcaatgcactccctgttttgggctggtccc
cattttcaattctcttaatgagttccctgttcttgtactggttcctgtca
ttcctcattataaacatggatgtgatggatactctgttctatttctttaa
tattctagtccctaaatttatggggttttatctttattaattacttcttc
ttgctgttcttttttacttcaatttttgagtcatctatttaattggtttt
gtttcatcacattgctttaattttcaagttgatagaagaattttaagcta
cagctctttttcttagcaatgatttattttgactctcaaatcctgtggtg
cattttcattaccattaaattcttttctgttgtattacattcctctatta
gctcaagtattgttattcccaagtgatagacttgtcctatatgacttttt
attttggtggctgttttcagatgattctgatggcccatttctatttcact
gggacttggtgacattttatttggctcaaaattagacatagtccttctag
atctgagggatgtttacagagcatgctattgctatgtaccagagtccaga
cagcctgttcactatactgcctataacgttgt

gaattcttagccagggagtgaagcgtggccttgttggaggaagtgtgtca
ctggggatgggttctgaggtcttaaaggattctctctctctgtttttgtc
ctcttctctgtctctgtctgtctctgtctctctgcccttggcttatggat
caggatgtagacccctagctactgctcagtgacatgtctgtctgcgtctc
accgtgatgctcgcagattaaccctctaaagccatgtttttctatcttcc
taaagctgagaccctttaatactgttcctcatgttgtggtgacctccaac
cataaaattattttcattgctacttcataactataattttgctactatta
tgttgtgatataagtatccgtgttttctgatggttttaggcaatccctgt
gaaaggatcgtttgatctctaaaggatacttgacccacaggttgagagcc
actgctctaaaactactagcaaaccatgcttatataaatataagctatat
tatatataaacataactatatataaactatagcaaccccatggcctctgt
atcatatcctgcctctaggttcacagcccactttaattcctaccttggtc
tcttccttcaatgaactgggaaaatggccctgtcctccaagagttgcttt
tggtcatagtatttcagcatagcaatagttacccaaagtaaaactgaatg
gtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_4425944_4427029
seq2: B6Ng01-310C04.b_49_1130

seq1  GAATTCACTGGTTTAGTGTCTTAACAGTCCAGGACCCTGCATTTTTCCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGGTTTAGTGTCTTAACAGTCCAGGACCCTGCATTTTTCCTT  50

seq1  CCACACTGTGATGGTTTGTATATGCTTGGCCCAGGCAGTGGCACTATTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACTGTGATGGTTTGTATATGCTTGGCCCAGGCAGTGGCACTATTGG  100

seq1  ATGGTGTGACCTTGCTGGAGTAAGTGTGTCACTGTGGGTGTGATCCTCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGTGACCTTGCTGGAGTAAGTGTGTCACTGTGGGTGTGATCCTCAT  150

seq1  CCTAGCTGCCTAGAAGTCAGTCTTTCACTAGCAGTCTTCAGATGAAGATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGCTGCCTAGAAGTCAGTCTTTCACTAGCAGTCTTCAGATGAAGATG  200

seq1  TAGAACTCTCCGCTCCTCCTGCACCATGCCTGCCTGGCTGCTTCCATGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAACTCTCCGCTCCTCCTGCACCATGCCTGCCTGGCTGCTTCCATGTT  250

seq1  CCCACCTTGATGAGAATGGATTGAACCTCTGAATCTATAAGCCAGCCCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCTTGATGAGAATGGATTGAACCTCTGAATCTATAAGCCAGCCCCA  300

seq1  ATCAAATGTTGTCCTTCTAAGAGTTGCCTTGGTCATGGTGTCTTTCACAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAATGTTGTCCTTCTAAGAGTTGCCTTGGTCATGGTGTCTTTCACAA  350

seq1  GAGTAAAACCCTAACTATGACACACACCTGACCATTTTCTTCCTTGATGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAAAACCCTAACTATGACACACACCTGACCATTTTCTTCCTTGATGG  400

seq1  TGTCTATCCAGAGATCACCCCCAATCACCGCAGACCTGTGTGGCTCCTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTATCCAGAGATCACCCCCAATCACCGCAGACCTGTGTGGCTCCTTA  450

seq1  CGCCATGGGCATCAATTTTTTCAATGCACTCCCTGTTTTGGGCTGGTCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCATGGGCATCAATTTTTTCAATGCACTCCCTGTTTTGGGCTGGTCCC  500

seq1  CATTTTCAATTCTCTTAATGAGTTCCCTGTTCTTGTACTGGTTCCTGTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTCAATTCTCTTAATGAGTTCCCTGTTCTTGTACTGGTTCCTGTCA  550

seq1  TTCCTCATTATAAACATGGATGTGATGGATACTCTGTTCTATTTCTTTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCATTATAAACATGGATGTGATGGATACTCTGTTCTATTTCTTTAA  600

seq1  TATTCTAGTCCCTAAATTTATGGGGTTTTATCTTTATTAATTACTTCTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTAGTCCCTAAATTTATGGGGTTTTATCTTTATTAATTACTTCTTC  650

seq1  TTGCTGTTCTTTTTTACTTCAATTTTTGAGTCATCTATTTAATTGGTTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGTTCTTTTTTACTTCAATTTTTGAGTCATCTATTTAATTGGTTTT  700

seq1  GTTTCATCACATTGCTTTAATTTTCAAGTTGATAGAAGAATTTTAAGCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCATCACATTGCTTTAATTTTCAAGTTGATAGAAGAATTTTAAGCTA  750

seq1  CAGCTCTTTTTCTTAGCAATGATTTATTTTGACTCTCAAATCCTGTGGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTCTTTTTCTTAGCAATGATTTATTTTGACTCTCAAATCCTGTGGTG  800

seq1  CATTTTCATTACCATTAAATTCTTTTCTGTTGTATTACATTCCTCTATTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTCATTACCATTAAATTCTTTTCTGTTGTATTACATTCCTCTATTA  850

seq1  GCTCAAGTATTGTTATTCCCAAGTGATAGACTTGTCCTATATGACTTTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAAGTATTGTTATTCCCAAGTGATAGACTTGTCCTATATGACTTTTT  900

seq1  ATTTTGGTGGCTGTTTTCAGATGATTCTGATGGCCCATTTCTATTTCACT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGGTGGCTGTTTTCAGATGATTCTGATGGCCCATTTCTATTTCACT  950

seq1  GGGACTTGGTGACATTTTATTTGGCTCAAAATTAAGACATAGTCCTTCTA  1000
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  GGGACTTGGTGACATTTTATTTGGCTCAAAATT-AGACATAGTCCTTCTA  999

seq1  GATCTGAGGGATGTTTACAGAGCATGCTATTTGCTATGTACCAAGAGTCC  1050
      ||||||||||||||||||||||||||||| |||||||||||| |||||||
seq2  GATCTGAGGGATGTTTACAGAGCATGCTA-TTGCTATGTACC-AGAGTCC  1047

seq1  AGACAAGCCTGTTCACTATACTGCCTATAACGTTGT  1086
      |||| |||||||||||||||||||||||||||||||
seq2  AGAC-AGCCTGTTCACTATACTGCCTATAACGTTGT  1082


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