BAC Information

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BAC

Clone NameB6Ng01-310N13
Chromosome17 (Build37)
Map Location 22,062,331 - 22,063,487
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC627884, Ppp2r1a, V1rf5, Zfp160, LOC627912, LOC435509, EG627924, 4933430A09, EG665654, EG665662, LOC665666, EG665669, V1rf1, V1rf2, V1rf4, V1rf3, A830058L05Rik, Zfp54, Zfp51, Zfp53, LOC100042508, Zfp52, BC049807, Zfp760, BC043476, 4930515G13Rik, 2610036F08Rik, LOC624960
Downstream gene3110048L19Rik, 4930432O21Rik, LOC665820, LOC665825, LOC674332, LOC631010, EG665844, EG210853, LOC671007, EG240038, EG631624, 6330416L07Rik, Zfp758, 1300003B13Rik, EG210876, LOC100042656, EG628185, ENSMUSG00000046088, EG383218, EG433078, LOC100042679, A630033E08Rik, LOC671128, LOC665961
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-310N13.bB6Ng01-310N13.g
ACCGA102715GA102716
length1,1531,209
definitionB6Ng01-310N13.b B6Ng01-310N13.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaagaagagtgagagaaagttctctaccaagatcaaatgaaact
actattgcttcaaggttgtcagtgacaaaattcactggactgtgtcttta
tgtggctcttaactcatattaacaccaagtgattcaacttcaataaccct
cagaacaatgctgcccatgggcaaatattacagaccattgtggtagcctg
tcctgttgtagctcatcactctatatatcacaagggatgcattagatttt
atttctttttgttaactaatttacagaatggtaatatcctatatatctga
gaacatttcatcctgaaacaagattcaataactgacaattcttaacatca
tggttgggtccagtctttaaaatatatgagattataaagctttaatgagc
tagccagtgaacaatagatcgggtacatgttgatgtacagtttagaaatt
tcaaaattgtggaaaatcattttgaaatactgaaacaaaaagagaaaatt
gtcacagcaaggcaaaccattatattagattattgataataaattcagaa
atactcaggaaatttggaccctgcacaaggtggtatattatgaaactata
tcattacataattttccctgattttcaaaaataaggaattaattaagctc
atgagaaaccactgagttagaatattgtgttgttctcagtattgagagat
tgttgaaagataatcttgttggtaaaatcttgagtacacagaggttcata
ctttcaattgctcacaaataattcctattatttgctacatcagggatgtt
ggggctcacaacgcaggcaattaaaagttaggtgtctttactggcccttt
ttatacacatttcttgtcttaagaagcagcaagcatatgatgagagtgca
caaaataggttcaggtagactcccagcggagggtatgtggaaaagcactt
gtgcagagtgagaaatatgcaattcaatggggcagacacatcaccatatc
agagggttgatggccaatgaaacagtctgtgaaattgggacttgcatttg
cattttattttaagacatggtaaaagcatattacagggagctgatgagca
ttctagaggacttccacagcttgttttagggaactggtcggattcagtac
ctt
gaattctttgatgttttctaagatcacctttgtgggaaaagcatttgtca
cattcactacatttgtaaggcttctctcctgtatgaactctctgatgagc
attaagactgcttttgtaggtaaaacacttgtcacattcactacatttgt
aaggcttctcacctgcatgaattctctgatgactcctaagcctggctttt
agcataaaagatttgtcacattcactgcatttgtaaggtcgatttcctga
atgtattctctgatgagttctaagacaatatttgtcagtaaagcatttgt
cacactcactgcatttgtagggtttttcttctgcatgaactctctgatga
ataataaaactgcatttttgagtaaagaatttgtcacattcactgcactt
ataaggtttctctcctgtatgaattagcagatgaatactaagattgcctt
gctgagtaaaagacttgttatattcgctgcatttgtaaggtttctctcct
gaatgtattctctgatgaattccaatactgcatttctttgtaaagcattt
gtcacattcactacatctgtaaagtttttctcctgtatgaattctctgat
gaatactaagatcacttttgagaataaagcatttgtcacattcactacat
ttgtaacctttctttcctgtatgaattatctgatgaatgataagacggca
ttttttgagtaaagcctttgtcacattcactacatttgtaaggtttttct
cccatatgaacgctctgatgtcttctaagatcacctttgtgggtaaagca
tttgccacattcactacatttgtaagctttctctcctgtgtggataatct
gatgacttctaaaggccacttttgtaggtaaagcatttgtcacattcact
acatttgtaaaggtttttctcctgtatgaattcgcagatgaattctaaga
ttgccttgctgagtaaaggatttgtcacattcactgcatttgttatgatt
tctcctcctgtatgactctctgatgatattaagacgggcttttggctggt
aaaggcccttgcacattcactacattcgtaggtttctcttccctgtatgg
attctcctggatgatactaggattcactttttggagaataagcatttgtc
aatcacatacgttgttagctttcatgcctggtgattgagaatatactctg
cgtagtgaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_22062331_22063487
seq2: B6Ng01-310N13.b_44_1196 (reverse)

seq1  AAGGTACTGAATCCGGACCAGTTCCTAAAAACAGCCTGTGGAAGTTCCTC  50
      |||||||||||||| ||||||||||  ||||||  ||||||||| |||||
seq2  AAGGTACTGAATCC-GACCAGTTCCCTAAAACAAGCTGTGGAAG-TCCTC  48

seq1  TAGGAATGCTCATCAGCTTCCTGTAATATGGCTTTTACCATGGTCTTATA  100
      || ||||||||||||||| |||||||||| ||||||||||| |||||| |
seq2  TA-GAATGCTCATCAGCTCCCTGTAATAT-GCTTTTACCAT-GTCTTAAA  95

seq1  --TAAATGCAAATGCAAGTTCCAATTTCACAGACTGTTTCATTGGCCATC  148
         |||||||||||||||| ||||||||||||||||||||||||||||||
seq2  ATAAAATGCAAATGCAAGTCCCAATTTCACAGACTGTTTCATTGGCCATC  145

seq1  AACCCTCTGATATGGTGATTGTGTCTGCCCCATTGAATTGCATATTTCTC  198
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  AACCCTCTGATATGGTGA-TGTGTCTGCCCCATTGAATTGCATATTTCTC  194

seq1  ACTCTGCACAAGTGCTTTTCCACATACCCTCCGCTGGGAGTCTACCTGAA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGCACAAGTGCTTTTCCACATACCCTCCGCTGGGAGTCTACCTGAA  244

seq1  CCTATTTTGTGCACTCTCATCATATGCTTGCTGCTTCTTAAGACAAGAAA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATTTTGTGCACTCTCATCATATGCTTGCTGCTTCTTAAGACAAGAAA  294

seq1  TGTGTATAAAAAGGGCCAGTAAAGACACCTAACTTTTAATTGCCTGCGTT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTATAAAAAGGGCCAGTAAAGACACCTAACTTTTAATTGCCTGCGTT  344

seq1  GTGAGCCCCAACATCCCTGATGTAGCAAATAATAGGAATTATTTGTGAGC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGCCCCAACATCCCTGATGTAGCAAATAATAGGAATTATTTGTGAGC  394

seq1  AATTGAAAGTATGAACCTCTGTGTACTCAAGATTTTACCAACAAGATTAT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGAAAGTATGAACCTCTGTGTACTCAAGATTTTACCAACAAGATTAT  444

seq1  CTTTCAACAATCTCTCAATACTGAGAACAACACAATATTCTAACTCAGTG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCAACAATCTCTCAATACTGAGAACAACACAATATTCTAACTCAGTG  494

seq1  GTTTCTCATGAGCTTAATTAATTCCTTATTTTTGAAAATCAGGGAAAATT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTCATGAGCTTAATTAATTCCTTATTTTTGAAAATCAGGGAAAATT  544

seq1  ATGTAATGATATAGTTTCATAATATACCACCTTGTGCAGGGTCCAAATTT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAATGATATAGTTTCATAATATACCACCTTGTGCAGGGTCCAAATTT  594

seq1  CCTGAGTATTTCTGAATTTATTATCAATAATCTAATATAATGGTTTGCCT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGTATTTCTGAATTTATTATCAATAATCTAATATAATGGTTTGCCT  644

seq1  TGCTGTGACAATTTTCTCTTTTTGTTTCAGTATTTCAAAATGATTTTCCA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTGACAATTTTCTCTTTTTGTTTCAGTATTTCAAAATGATTTTCCA  694

seq1  CAATTTTGAAATTTCTAAACTGTACATCAACATGTACCCGATCTATTGTT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTTGAAATTTCTAAACTGTACATCAACATGTACCCGATCTATTGTT  744

seq1  CACTGGCTAGCTCATTAAAGCTTTATAATCTCATATATTTTAAAGACTGG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGCTAGCTCATTAAAGCTTTATAATCTCATATATTTTAAAGACTGG  794

seq1  ACCCAACCATGATGTTAAGAATTGTCAGTTATTGAATCTTGTTTCAGGAT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAACCATGATGTTAAGAATTGTCAGTTATTGAATCTTGTTTCAGGAT  844

seq1  GAAATGTTCTCAGATATATAGGATATTACCATTCTGTAAATTAGTTAACA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGTTCTCAGATATATAGGATATTACCATTCTGTAAATTAGTTAACA  894

seq1  AAAAGAAATAAAATCTAATGCATCCCTTGTGATATATAGAGTGATGAGCT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAATAAAATCTAATGCATCCCTTGTGATATATAGAGTGATGAGCT  944

seq1  ACAACAGGACAGGCTACCACAATGGTCTGTAATATTTGCCCATGGGCAGC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACAGGACAGGCTACCACAATGGTCTGTAATATTTGCCCATGGGCAGC  994

seq1  ATTGTTCTGAGGGTTATTGAAGTTGAATCACTTGGTGTTAATATGAGTTA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTCTGAGGGTTATTGAAGTTGAATCACTTGGTGTTAATATGAGTTA  1044

seq1  AGAGCCACATAAAGACACAGTCCAGTGAATTTTGTCACTGACAACCTTGA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCACATAAAGACACAGTCCAGTGAATTTTGTCACTGACAACCTTGA  1094

seq1  AGCAATAGTAGTTTCATTTGATCTTGGTAGAGAACTTTCTCTCACTCTTC  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATAGTAGTTTCATTTGATCTTGGTAGAGAACTTTCTCTCACTCTTC  1144

seq1  TTGGAATTC  1157
      |||||||||
seq2  TTGGAATTC  1153