BAC Information

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BAC

Clone NameB6Ng01-310P21
Chromosome17 (Build37)
Map Location 82,195,017 - 82,195,711
singlet/doubletsinglet
Overlap genenone
Upstream geneC230072F16Rik, LOC675572, EG668830, Tmem178, Thumpd2, LOC100043700, LOC100043704, Slc8a1, EG668832
Downstream geneLOC100043707, LOC625467, LOC668836, EG433141, EG625514
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-310P21.bB6Ng01-310P21.g
ACCGA102821GA102822
length1,209948
definitionB6Ng01-310P21.b B6Ng01-310P21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
ggaattctttgtttttaatagctgagtagtactccattatgtaaatgtat
cacatttttttatccattcttctgttgagggacatctgggttcattccag
cttctggctattataaataaggttgctatgaacataatggagcatgtgtc
cttattatatgttggagcatcttctgggtacatgcctagaagtggtattg
ctggatcctcctgtagtactatgtctaattttctgattcccaaagtggtt
gtaccatcttgcattcccaccagcaatggaggaagagtctcagaggtgtt
ttgatttgcatttccctgatgactaaggatgttgaacatttttttaggtg
cctctcagccattcggtattcctcagttgataattgtttgtttagctcag
taccccatttttaaatattactgaatgttttgacaattttctgtctcctg
ttgccttttttctacttttcaaacctttcctgaattcaccagagatacct
attatatactctttgaatgatgtttacgatctaataatctctcaccaatt
ttacgatcattcctgccctagttagggcttctatggctgtaatggaacac
catgaccaaaagcaagctggagaggaaagggtatttatttatttatttat
ttatttatttatttatttatttatttatttttattcccacattatagaac
atcactgaaagatgtcagaacaggaactcaagtagggctggaacctagat
gtgggggctaatgcagaggtcatagaggggtgctgcttactggcttgctc
accgtggcttactcagtcttctttcttatagaaactagaaccactaatct
cagaatggaaccaaccacaattagctgttcccttccccattagtaatgaa
ttttaaaaattactctacagctaaatcttatggagcatttctcaattgag
ttactcccttcagtgacactagcttgtatgaaattgacgtaaaactatcc
agcacaattactttttattcaacagactggttctattgttgccaatgact
gcagtagtctctactatgctgtctggcatctggcaaggccctcctcctgt
acacagtcaatccttcacaatggaccaggttactggcccagaatttctgt
gatccaaaccttcatgaatttcattgccatgttgtaaaggtatacactct
cgcagaggt

gaattcactgtttagatctgaactgcattttaaaattgagtttatttttt
gatgtgcatttctgaaacttttattagatatatcagatattagtcctcca
tcagatatgcagctggtaaaaaatattttcccattctgtagcctactgct
ctgtctaaataatggacactcagagacattctaaaatgtctgtaagaagc
tactcagtccatataggtttatttgtatgtgcatgttttaagagttgaca
attttatattgtctaaccagttgatgatgggctctaccttggtaaaaact
agttctttccctctcagctgtgctgacatatagttcttttctagagttga
ggcatcacgagccttcccccttccacattagcatggctattagtgttgtt
tttattcacatcatgttatggcagacatgtttgttagactttatgggtgt
ggcttctgacattcccaggagacacataatcacagcaaactgcctgttcc
tctgactcttataatctttacatcccctcttcctgaatgaacctggagcc
tgtggtgcagggtgtgtgtgtgatgcagatgtttctcttgagatcagggt
ctacaactctgcacttgactggttgtatttttcaatcatggtctcagtct
cttgcaaagaagagttttccaaataaggggtaaaactacacatatttgca
catttcataaactgaacaaggacaactacagtggacgtgttaacagacag
aagaaagtccaggaggtcttagtcatacacaaagaacagcaagcaacaaa
ggaatgctgagaacaggagaagtagtcttctcaagggagaacatcaactg
gttatccaataccaaatgatcagccctgaaaaacatagatataagtaaca
atatacagattgaacactatgtccctatgtacaaatacatgaatattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_82195017_82195711
seq2: B6Ng01-310P21.g_66_760

seq1  GAATTCACTGTTTAGATCTGAACTGCATTTTAAAATTGAGTTTATTTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGTTTAGATCTGAACTGCATTTTAAAATTGAGTTTATTTTTT  50

seq1  GATGTGCATTTCTGAAACTTTTATTAGATATATCAGATATTAGTCCTCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTGCATTTCTGAAACTTTTATTAGATATATCAGATATTAGTCCTCCA  100

seq1  TCAGATATGCAGCTGGTAAAAAATATTTTCCCATTCTGTAGCCTACTGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATATGCAGCTGGTAAAAAATATTTTCCCATTCTGTAGCCTACTGCT  150

seq1  CTGTCTAAATAATGGACACTCAGAGACATTCTAAAATGTCTGTAAGAAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTAAATAATGGACACTCAGAGACATTCTAAAATGTCTGTAAGAAGC  200

seq1  TACTCAGTCCATATAGGTTTATTTGTATGTGCATGTTTTAAGAGTTGACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCAGTCCATATAGGTTTATTTGTATGTGCATGTTTTAAGAGTTGACA  250

seq1  ATTTTATATTGTCTAACCAGTTGATGATGGGCTCTACCTTGGTAAAAACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATATTGTCTAACCAGTTGATGATGGGCTCTACCTTGGTAAAAACT  300

seq1  AGTTCTTTCCCTCTCAGCTGTGCTGACATATAGTTCTTTTCTAGAGTTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTTTCCCTCTCAGCTGTGCTGACATATAGTTCTTTTCTAGAGTTGA  350

seq1  GGCATCACGAGCCTTCCCCCTTCCACATTAGCATGGCTATTAGTGTTGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATCACGAGCCTTCCCCCTTCCACATTAGCATGGCTATTAGTGTTGTT  400

seq1  TTTATTCACATCATGTTATGGCAGACATGTTTGTTAGACTTTATGGGTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTCACATCATGTTATGGCAGACATGTTTGTTAGACTTTATGGGTGT  450

seq1  GGCTTCTGACATTCCCAGGAGACACATAATCACAGCAAACTGCCTGTTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTCTGACATTCCCAGGAGACACATAATCACAGCAAACTGCCTGTTCC  500

seq1  TCTGACTCTTATAATCTTTACATCCCCTCTTCCTGAATGAACCTGGAGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACTCTTATAATCTTTACATCCCCTCTTCCTGAATGAACCTGGAGCC  550

seq1  TGTGGTGCAGGGTGTGTGTGTGATGCAGATGTTTCTCTTGAGATCAGGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTGCAGGGTGTGTGTGTGATGCAGATGTTTCTCTTGAGATCAGGGT  600

seq1  CTACAACTCTGCACTTGACTGGTTGTATTTTTCAATCATGGTCTCAGTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAACTCTGCACTTGACTGGTTGTATTTTTCAATCATGGTCTCAGTCT  650

seq1  CTTGCAAAGAAGAGTTTTCCAAATAAGGGGTAAAACTACACATAT  695
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCAAAGAAGAGTTTTCCAAATAAGGGGTAAAACTACACATAT  695


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