BAC Information

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BAC

Clone NameB6Ng01-311H03
Chromosome17 (Build37)
Map Location 70,158,664 - 70,159,787
singlet/doubletsinglet
Overlap genenone
Upstream geneEG622645, Epb4.1l3, 2410021H03Rik, Zfp161, C030034I22Rik, A930029G22Rik, A330050F15Rik, LOC100043623, LOC668720, LOC673535
Downstream geneLOC100043630, LOC623112, LOC623143, Dlgap1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-311H03.bB6Ng01-311H03.g
ACCGA103161GA103162
length1,1121,169
definitionB6Ng01-311H03.b B6Ng01-311H03.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctagtgaatctttaatgctttccaaagagcccatgtaagttttga
atgctattgtttctggtggaagctgaatgtttgaggaaagctcttaaaat
tcattgcctatatttttttgctatagttacatagtgagttgatttttttc
caactaaagtaatatatgaataaaatgagaccagcaaaacaagtccttgg
gtgtttcaggattcattagttatagatggcaacctgagtactgcctttcc
taacacaaagctccaaataacagaaacaacaaagttggctcatcactgtt
actgaccagcagccttaaagctgagcgataattgacaatttcaaagatcc
attcaagttctgggcagtcattgaacttgcttagtgtgtagccaatttgg
aagaatatttgtgtaatgttttttgaaagtctgaacaccctcaaaattct
gatgctgtgtaagtgccttaaacacagtagcaatggagggagacagcatg
atgcagttttctttccgtggttatcctttttttcctttatgaaatgtaat
tttctggaagcagtgttttagactatattcctgaatacaaaattttcagt
atctcagcacagaaattgagatagtataagcaaaatactcactgttgcct
accattagaagccattgattggttttcctaagtgagaactatctgtgaaa
tatctatttgggggactattaccttacctattgtgtgaaaataactctat
gtctttgaacggcaggaaaatggtactatataaagactaattctgaatat
tatcttggacaaatatctttaaaggactctaggaatgtgatgagcctatc
tgtaccaccatggttttatccaaacagggatgtgtgtgatatccctcata
atgaccattgcttttagaatcatctggaagaagggagatacacagggcac
cagggaatcttatagagttcaggatggatgaatctcccaatctataactt
ttcaagtagcagtgtactgggtgaagtaggtacagattgaaatactaaac
tggttaattctgcctgtctcataagaactctatatcgagatatcaaggtc
atgaagttatca

gaattctttgtttagctctgtaccctgttttttaaatagggttatttgat
tttctggagaagaacttcttgagttctttatatattttggatattatccc
cctatcagattgagggttggaaagatcttttcccaatctgttggttgctt
tttgatcttattgacagtgtcctttgccttacagaagctttgcaatttta
tgatgtcccatttgttgattcttgatcttaaagcacaagccaatggtgtt
ctgttcaggaagttttcctctgtgcccatatctttgtggctcttccccac
ttttttctctataagtttcaatgtctctggttttgtgtggagttctttga
tccacttagacttgagctttgtacaaggagataagaattgatcaattcac
attcttctacatgctaatggatagttgagttagcaccatttgttgaagat
gctgtcttctttccactggatggttttagctcctttttcaaagatcaagt
aaccataggtgtgtgggttaatttctgggttttcaattctgttccattga
tctacctgtctgtcattgtaccagtaccatgcagtttttatcacaattgc
tctgtagtacagcttgaggtcagggatggtaattccaccagaggttcttt
tattgttgagaatagctttggatatcctaggatttttgctattgcagacg
aatttgcaaattgctccttctaactctgtgaagaattgagttggaatttt
gatggggcttgcattgaatctgtagattgcttttggcaagatagccattt
tgagtatattaatcctgccaatccatgagcatgggagatctatccatctt
cttagatcttctttaatttctttcttcagatacttgaagttcttatcaca
cagatatttcatttccttagttagagtcacactaagtattttatattatt
tgtgacttattttgagagtgtcttttccctaatttctcccccccccccct
aatttcatactcaagctgtttatctctgtttagagaaagcacttattttt
tgaggtaatttatatctaaggtacttcactgaaggtggtttcagctaagg
agttctctctgtgactatggcattattcataattatcagaatgcatctct
gcgagatagggcggatagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_70158664_70159787
seq2: B6Ng01-311H03.b_48_1159 (reverse)

seq1  TGATAAAACCTCATGACTTTAATATCTCGATTATAGAGTTTCCTTATGAG  50
      ||||  ||| ||||||| || ||||||||| |||||||||  ||||||||
seq2  TGAT--AACTTCATGACCTTGATATCTCGA-TATAGAGTT--CTTATGAG  45

seq1  ACA-GCAGAATT-ACCAGTTTAGTTATTTCAAATTCTGTAACTACTTCAC  98
      ||| |||||||| |||||||||| ||||||||  |||||| |||||||||
seq2  ACAGGCAGAATTAACCAGTTTAG-TATTTCAA--TCTGTACCTACTTCAC  92

seq1  CCAGTACACTGCCTTACTTTGAAAAGTTAATAGATTTGGGAGATTTCATC  148
      ||||||||||||  ||| |||||||||| ||||| |||||||| ||||||
seq2  CCAGTACACTGC--TAC-TTGAAAAGTT-ATAGA-TTGGGAGA-TTCATC  136

seq1  CATCCTGAACTCTATAAGATTCCCTGGTGCCCTGTGTATCTCCCTTCTTC  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTGAACTCTATAAGATTCCCTGGTGCCCTGTGTATCTCCCTTCTTC  186

seq1  CAGATGATTCTAAAAGCAATGGTCATTATGAGGGATATCACACACATCCC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGATTCTAAAAGCAATGGTCATTATGAGGGATATCACACACATCCC  236

seq1  TGTTTGGATAAAACCATGGTGGTACAGATAGGCTCATCACATTCCTAGAG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGGATAAAACCATGGTGGTACAGATAGGCTCATCACATTCCTAGAG  286

seq1  TCCTTTAAAGATATTTGTCCAAGATAATATTCAGAATTAGTCTTTATATA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTAAAGATATTTGTCCAAGATAATATTCAGAATTAGTCTTTATATA  336

seq1  GTACCATTTTCCTGCCGTTCAAAGACATAGAGTTATTTTCACACAATAGG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCATTTTCCTGCCGTTCAAAGACATAGAGTTATTTTCACACAATAGG  386

seq1  TAAGGTAATAGTCCCCCAAATAGATATTTCACAGATAGTTCTCACTTAGG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGTAATAGTCCCCCAAATAGATATTTCACAGATAGTTCTCACTTAGG  436

seq1  AAAACCAATCAATGGCTTCTAATGGTAGGCAACAGTGAGTATTTTGCTTA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCAATCAATGGCTTCTAATGGTAGGCAACAGTGAGTATTTTGCTTA  486

seq1  TACTATCTCAATTTCTGTGCTGAGATACTGAAAATTTTGTATTCAGGAAT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTATCTCAATTTCTGTGCTGAGATACTGAAAATTTTGTATTCAGGAAT  536

seq1  ATAGTCTAAAACACTGCTTCCAGAAAATTACATTTCATAAAGGAAAAAAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTCTAAAACACTGCTTCCAGAAAATTACATTTCATAAAGGAAAAAAA  586

seq1  GGATAACCACGGAAAGAAAACTGCATCATGCTGTCTCCCTCCATTGCTAC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAACCACGGAAAGAAAACTGCATCATGCTGTCTCCCTCCATTGCTAC  636

seq1  TGTGTTTAAGGCACTTACACAGCATCAGAATTTTGAGGGTGTTCAGACTT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTTAAGGCACTTACACAGCATCAGAATTTTGAGGGTGTTCAGACTT  686

seq1  TCAAAAAACATTACACAAATATTCTTCCAAATTGGCTACACACTAAGCAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAAACATTACACAAATATTCTTCCAAATTGGCTACACACTAAGCAA  736

seq1  GTTCAATGACTGCCCAGAACTTGAATGGATCTTTGAAATTGTCAATTATC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAATGACTGCCCAGAACTTGAATGGATCTTTGAAATTGTCAATTATC  786

seq1  GCTCAGCTTTAAGGCTGCTGGTCAGTAACAGTGATGAGCCAACTTTGTTG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGCTTTAAGGCTGCTGGTCAGTAACAGTGATGAGCCAACTTTGTTG  836

seq1  TTTCTGTTATTTGGAGCTTTGTGTTAGGAAAGGCAGTACTCAGGTTGCCA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGTTATTTGGAGCTTTGTGTTAGGAAAGGCAGTACTCAGGTTGCCA  886

seq1  TCTATAACTAATGAATCCTGAAACACCCAAGGACTTGTTTTGCTGGTCTC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATAACTAATGAATCCTGAAACACCCAAGGACTTGTTTTGCTGGTCTC  936

seq1  ATTTTATTCATATATTACTTTAGTTGGAAAAAAATCAACTCACTATGTAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATTCATATATTACTTTAGTTGGAAAAAAATCAACTCACTATGTAA  986

seq1  CTATAGCAAAAAAATATAGGCAATGAATTTTAAGAGCTTTCCTCAAACAT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAGCAAAAAAATATAGGCAATGAATTTTAAGAGCTTTCCTCAAACAT  1036

seq1  TCAGCTTCCACCAGAAACAATAGCATTCAAAACTTACATGGGCTCTTTGG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTTCCACCAGAAACAATAGCATTCAAAACTTACATGGGCTCTTTGG  1086

seq1  AAAGCATTAAAGATTCACTAGAATTC  1124
      ||||||||||||||||||||||||||
seq2  AAAGCATTAAAGATTCACTAGAATTC  1112


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