MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-312C21
Chromosome	17 (Build37)
Map Location	89,057,249 - 89,204,122
singlet/doublet	doublet
Overlap gene	Gtf2a1lf, Lhcgr
Upstream gene	Msh2, Kcnk12, LOC626888, LOC668863, EG626920, Msh6, Fbxo11, EG225058, Foxn2, Ccdc128, LOC668866
Downstream gene	LOC668867, Fshr, LOC100043904
Link	Open Mouse BAC browser

Click to get alignment info.

name	Msh2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17685 MGI:101816
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Kcnk12 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:210741 MGI:2684043
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC626888 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:626888
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC668863 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668863
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 ESTs, 2 Proteins pseudo : _no_value

name	EG626920 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:626920 MGI:3644888
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 52 ESTs, 3 Proteins

name	Msh6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17688 MGI:1343961
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Fbxo11 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:225055 MGI:2147134
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG225058 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:225058 MGI:3648524
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 83 ESTs, 7 Proteins

name	Foxn2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14236 MGI:1347478
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ccdc128 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73825 MGI:1921075
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668866 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668866
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Gtf2a1lf (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71828 MGI:1919078
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lhcgr (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16867 MGI:96783
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668867 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668867
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Fshr (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14309 MGI:95583
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043904 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043904
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	Msh2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130707 GeneID:17685 MGI:101816
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mutS homolog 2 (E. coli) transcript_id : NM_008628.2

name	Kcnk12 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40445392 GeneID:210741 MGI:2684043
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : potassium channel, subfamily K, member 12 transcript_id : NM_199251.1

name	EG626920 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149268837 GeneID:626920 MGI:3644888
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 52 ESTs, 3 Proteins product : predicted gene, EG626920 transcript_id : XM_891536.3

name	Msh6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6754743 GeneID:17688 MGI:1343961
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mutS homolog 6 (E. coli) transcript_id : NM_010830.1

name	Fbxo11 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486643 GeneID:225055 MGI:2147134
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : F-box protein 11 transcript_id : NM_001081034.1

name	EG225058 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149268941 GeneID:225058 MGI:3648524
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 82 ESTs, 7 Proteins product : predicted gene, EG225058 transcript_id : XM_140116.6

name	Foxn2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803567 GeneID:14236 MGI:1347478
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : forkhead box N2 transcript_id : NM_180974.2

name	Ccdc128 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803232 GeneID:73825 MGI:1921075
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coiled-coil domain containing 128 transcript_id : NM_028658.3

name	Gtf2a1lf (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:12963758 GeneID:71828 MGI:1919078
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : general transcription factor II A, 1-like factor transcript_id : NM_023630.1

name	Lhcgr (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129900 GeneID:16867 MGI:96783
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : luteinizing hormone/choriogonadotropin receptor transcript_id : NM_013582.2

name	Fshr (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31980788 GeneID:14309 MGI:95583
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : follicle stimulating hormone receptor transcript_id : NM_013523.2

name	LOC100043904 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268942 GeneID:100043904
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : hypothetical protein LOC100043904 transcript_id : XM_001481213.1

name	Msh2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678938 CCDS:CCDS29019.1 GeneID:17685 MGI:101816
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] [Evidence ISS] [Evidence IC] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATPase activity [Evidence IMP]; GO:0019237 - centromeric DNA binding [Evidence IDA]; GO:0003684 - damaged DNA binding [Evidence IMP]; GO:0003677 - DNA binding [Evidence IMP]; GO:0004422 - hypoxanthine phosphoribosyltransferase activity [Evidence IDA]; GO:0030983 - mismatched DNA binding [Evidence IMP]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence IMP] [Evidence IGI]; GO:0030183 - B cell differentiation [Evidence IMP]; GO:0019724 - B cell mediated immunity [Evidence IMP]; GO:0007049 - cell cycle [Evidence IEA]; GO:0007050 - cell cycle arrest [Evidence IMP]; GO:0006928 - cell motility [Evidence IMP]; GO:0008340 - determination of adult life span [Evidence IMP]; GO:0006259 - DNA metabolism [Evidence IEA]; GO:0006281 - DNA repair [Evidence IMP]; GO:0001701 - embryonic development (sensu Mammalia) [Evidence IGI]; GO:0031573 - intra-S DNA damage checkpoint [Evidence IGI]; GO:0045190 - isotype switching [Evidence IMP]; GO:0006298 - mismatch repair [Evidence IDA] [Evidence IMP]; GO:0045910 - negative regulation of DNA recombination [Evidence IMP]; GO:0043524 - negative regulation of neuron apoptosis [Evidence IMP]; GO:0006119 - oxidative phosphorylation [Evidence IMP]; GO:0006301 - postreplication repair [Evidence ISS] [Evidence IMP]; GO:0006164 - purine nucleotide biosynthesis [Evidence IDA]; GO:0006974 - response to DNA damage stimulus [Evidence IMP]; GO:0010224 - response to UV-B [Evidence IMP]; GO:0010165 - response to X-ray [Evidence IMP]; GO:0016446 - somatic hypermutation of immunoglobulin genes [Evidence IMP] [Evidence IGI]; GO:0016447 - somatic recombination of immunoglobulin gene segments [Evidence IMP] [Evidence IGI] codon_start : 1 product : mutS homolog 2 protein_id : NP_032654.1

name	Kcnk12 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40445393 CCDS:CCDS29020.1 GeneID:210741 MGI:2684043
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005267 - potassium channel activity [Evidence IEA] GO_process : GO:0006813 - potassium ion transport [Evidence IEA] codon_start : 1 product : potassium channel, subfamily K, member 12 protein_id : NP_954859.1

name	EG626920 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149268838 GeneID:626920 MGI:3644888
definition	codon_start : 1 product : hypothetical protein protein_id : XP_896629.2

name	Msh6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754744 CCDS:CCDS29021.1 GeneID:17688 MGI:1343961
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0003684 - damaged DNA binding [Evidence IGI] [Evidence IMP]; GO:0003677 - DNA binding [Evidence IMP] [Evidence IGI]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0008340 - determination of adult life span [Evidence IMP]; GO:0006259 - DNA metabolism [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0008629 - induction of apoptosis by intracellular signals [Evidence IMP]; GO:0006298 - mismatch repair [Evidence IMP] [Evidence IGI]; GO:0045910 - negative regulation of DNA recombination [Evidence IMP]; GO:0006974 - response to DNA damage stimulus [Evidence IEA]; GO:0009411 - response to UV [Evidence IMP]; GO:0006299 - short patch mismatch repair system [Evidence IMP]; GO:0016446 - somatic hypermutation of immunoglobulin genes [Evidence IMP]; GO:0016447 - somatic recombination of immunoglobulin gene segments [Evidence IMP] codon_start : 1 product : mutS homolog 6 protein_id : NP_034960.1

name	Fbxo11 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486644 GeneID:225055 MGI:2147134
definition	GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0004842 - ubiquitin-protein ligase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 note : F-box only protein 11; GENA 104; jeff product : F-box protein 11 protein_id : NP_001074503.1

name	EG225058 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20901382 GeneID:225058 MGI:3648524
definition	codon_start : 1 product : hypothetical protein protein_id : XP_140116.1

name	Foxn2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30725849 CCDS:CCDS29022.1 GeneID:14236 MGI:1347478
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : forkhead homolog 19; forkhead box N1 product : forkhead box N2 protein_id : NP_851305.1

name	Ccdc128 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31541801 CCDS:CCDS29023.1 GeneID:73825 MGI:1921075
definition	codon_start : 1 exception : mismatches in translation product : RIKEN cDNA 1110018J12 protein_id : NP_082934.2

name	Gtf2a1lf (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:12963759 CCDS:CCDS29024.1 GeneID:71828 MGI:1919078
definition	GO_function : GO:0003677 - DNA binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation note : TfIIa-alpha/beta-like factor; general transcription factor IIA, 1-like factor product : general transcription factor II A, 1-like factor protein_id : NP_076119.1

name	Lhcgr (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305233 CCDS:CCDS29025.1 GeneID:16867 MGI:96783
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004964 - lutropin-choriogonadotropic hormone receptor activity [Evidence TAS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : luteinizing hormone receptor product : luteinizing hormone/choriogonadotropin receptor protein_id : NP_038610.1

name	Fshr (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31980789 CCDS:CCDS29026.1 GeneID:14309 MGI:95583
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation note : follicle-stimulating hormone receptor; follitropin receptor product : follicle stimulating hormone receptor precursor protein_id : NP_038551.2

name	LOC100043904 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268943 GeneID:100043904
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001481263.1

name	LOC626888 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:626888
definition	number : 1 pseudo : _no_value

name	LOC668866 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668866
definition	number : 3 pseudo : _no_value

name	LOC668866 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668866
definition	number : 2 pseudo : _no_value

name	LOC668866 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668866
definition	number : 1 pseudo : _no_value

name	LOC668867 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668867
definition	number : 1 pseudo : _no_value

name	LOC668863 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149268836 GeneID:668863
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 ESTs, 2 Proteins product : similar to ribosomal protein pseudo : _no_value transcript_id : XR_034864.1

clone name	MSMg01-525E16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-087N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-113P13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-105P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-330A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-091K09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-523O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-532H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-319E21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384E16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-163D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-451C23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-277G07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-268O09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-277G06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-370J13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-395G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405B11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-437P05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518O08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-085F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-062P07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-480N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472K09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-069B01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-326O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-424A22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-198C02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-415N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-070P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-074J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-403E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485L19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-133D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380F12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-106K10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-302F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-446M24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-454F08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-170H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347A04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-362E22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-145D23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352J04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526O18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-165N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-322P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-349H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-480J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-087D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-305J20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305J18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-479L12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-131E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-185B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-109K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327K24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-175H08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-096K01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-172J03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-152G07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-217D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-278E19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-378J10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-058D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-307A24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-341O03
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-449L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-335L22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-164E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-450N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305K06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372G24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-113K06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-068D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-492G18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391B21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-407H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-079D02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-363A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-298C03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-046I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-062D12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-385B15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-097N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-070F01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-160M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220F23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-248G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329C05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020L24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-069G06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204F21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136C02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-296J24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081G04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-052E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068O24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-193H08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-056L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223K15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-056O21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187H07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009D11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215B15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-045B06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-236F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308N14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006L07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-334K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346B05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006K23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118H11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-178N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040C05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-340I22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-022N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319K20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-171F18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-035I04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-060H06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-298O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-017G18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-345L09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-339P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337P08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278G18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-088K20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-268A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-191J19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-133O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148H05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-157J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007K14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-292B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-168A14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-210G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248N10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343A10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-264A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233B16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212B21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023C04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350E16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327P05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-345O14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-049C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326J24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060F11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-148B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316I16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-192O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199H18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-160L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313P09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-051E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-079O01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-236N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-290E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196P21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-078L24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-181K17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-050L21
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-312C21.b	B6Ng01-312C21.g
ACC	GA103712	GA103713
length	484	1,115
definition	B6Ng01-312C21.b	B6Ng01-312C21.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(89,057,249 - 89,057,738)	(89,203,009 - 89,204,122)
sequence	atgcgtattagcagtatcttagtggtgaaggagaattgatggtgcaaaga agagtgagagagtgatagagcgagagcgagagcgagagcgagagcgagag cgagagcgagagagagagagagagagagagagagagagagagagagagat attacagtgttaggtcataggaggaatgaagggccctggctgacttaggt cagagtacagttctggcaaggggaaggagtagccagcgcagagaggaatg aatgcctgctagatgcatagggtgctatgtcttagttcttttacagagga atgaatgcctgctggatgcatagggtgctatgtcttagttctagctgtgg cacttgtgaggggtgggggtgtcctctagctgtggcacttgtgaggggtg ggggtgtcccctagctgtggcatttgtgaggtgtgggggtgtcccctagc tgtggcacttgtgaggtgtgggggtgtcccttag	gaattcagtattcaaagacaacaggacatttctttctggaccctcagaga aaccatctaggttccccattcgcactgcagatcagttactctttacagtg gacctgcacagggcttcacagatgggcacacagaggtgcagaacgtgaag ggactagaaactcatcagttagggacatcgttgtcaaaacacaaaagcaa aggaagacacagtcagatgggcctgaagtccacccaatgccaggcattct gacacttggccaaaccaatgcagcaacaaagaaaagaatctggaccagaa ctcaagtctctgcagcccagtccagaatccactgcaagctgaacctgtgt ggggaacctcatcaacactgaattttccactgagctcttcaacatcggcc aagttgtgtggtctttgtaggtctcacagagagagaagagatgggcagag aaggagaggacggtgcacgagggcacaaattcccttccacagatgctgtt ttccttaaaagtttaaagtatgtactcgatctacaaaacaaattctgcca gtaaatgaaagcccaaataccctgtaaatagatggcacacaaattcttat aaagacaagagctccttttctgccgcgtgaataaccacttgttaatgtgt taatgtaggcaatttagatctttctgtccttcaccatgaaataagacagt aagaccagctccaaggagcagtatattgtttccaaacaccctaaggccca gcatcggattctgacaactcggattccttccttgagtgttcaccttccac cctctaagaaacttcagccctctcctggtgataagctcagatcctctgat cagggcctaacttcaggatttctcttttcttaaagcaaaacttccacatg ctggatactgacctagcggcagaggtccctgcctctgacacacaaatcca gtcttctgtcctctaatccctgagcaatcccctgcctgctgggtcttatt gcttagaagcaacataagctcctctgacattgacctggacagcaccatac acagagccaaaatgaaatgcacaaaaggccttggaggtgtcttgctctgc ctcatttaatgcagg
quality values	Open. Hide. 19 47 62 62 62 62 56 59 59 59 62 59 59 62 62 59 59 62 62 62 62 62 62 59 43 30 34 23 23 23 32 28 28 48 46 46 62 62 59 59 62 59 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 54 59 62 59 62 46 59 50 35 33 33 38 62 59 59 59 54 54 54 62 59 59 54 62 62 62 59 59 59 62 62 62 59 59 59 62 62 62 62 59 54 62 62 54 54 54 54 54 54 59 59 59 62 62 54 59 59 59 59 59 54 54 54 59 59 62 54 54 59 59 54 54 62 59 59 59 59 59 59 59 59 62 62 59 59 59 59 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 54 54 62 62 59 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 59 62 62 59 62 62 62 62 62 59 59 59 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 54 62 62 59 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 51 62 62 62 62 62 62 62 62 62 62 62 62 43 49 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 56 56 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 46 62 62 62 62 62 62 62 62 62 62 62 62 62 62 46 39 62 62 62 62 62 62 52 54 62 62 62 54 52 62 62 48 62 52 62 52 54 52 52 62 54 52 62 43 34 62 54 62 43 52 22 34 33 42 35 52 42 33 33 40 47 42 47 40 54 48 41 54 46 52 40 54 47 47 52 38 33 34 8 6 5 8 12 16 9 7	Open. Hide. 62 47 56 47 62 44 47 62 62 62 49 24 25 17 18 22 24 22 27 27 34 40 33 43 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 59 59 59 62 62 59 62 59 62 59 59 43 34 49 54 59 62 62 62 62 62 62 62 62 62 62 62 59 59 59 59 62 62 59 62 62 62 62 62 62 62 59 62 54 62 62 59 62 62 59 62 59 59 62 59 59 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 59 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 56 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 47 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 46 43 43 56 47 54 62 62 62 62 62 56 62 47 62 62 62 62 49 47 47 47 62 47 54 62 62 56 62 62 62 62 62 54 62 62 62 62 42 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 48 58 58 58 58 58 58 58 58 58 58 45 46 46 42 47 42 47 58 58 54 54 54 58 58 54 58 58 58 58 54 58 54 54 52 54 52 48 52 54 58 58 58 54 58 48 46 52 47 54 58 58 58 58 58 58 58 58 54 58 54 58 54 58 54 54 54 41 47 47 49 58 54 58 58 41 49 58 58 28 38 58 58 49 42 42 50 51 51 58 58 58 58 53 58 58 53 53 41 58 58 58 51 50 40 58 58 58 49 49 50 49 51 51 51 58 49 54 54 47 41 41 41 58 58 53 49 58 58 53 53 58 54 51 41 58 54 49 58 58 46 52 58 52 58 52 54 50 40 51 49 51 58 34 38 41 58 50 58 51 38 58 54 52 49 52 51 50 58 58 43 41 52 51 38 37 50 43 50 49 42 49 40 41 49 51 41 54 49 47 37 46 27 54 32 49 53 42 54 44 40 51 40 47 45 53 53 41 38 51 32 41 40 54 32 24 49 49 37 49 45 40 40 40 54 53 53 54 35 27 39 35 51 27 33 40 53 46 47 53 42 17 13 33 23 44 25 37 29 33 37 47 45 33 47 27 19 41 32 45 42 31 23 46 30 34 41 39 47 27 34 26 29 26 53 52 27 26 35 27 23 31 32 32 40 52 27 23 32 25 16 32 33 32 33 42 29 31 41 38 29 30 23 30 45 34 51 51 31 31 18 31 31 31 35 51 46 36 31 24 33 25 28 33 38 38 22 40 41 31 36 36 31 30 30 28 31 15 31 31 26 31 42 31 28 41 31 32 28 30 19 46 14 6 17 38 43 26 31 18 13 19 18 9 6 26 9 47 28 28 29 28 32 48 46 21 27 21 29 32 48 39 25 29 31 37 44 33 26 39 24 25 29 14 23 24 28 31 31 27 26 25 25 16 26 31 31 31 22 9 22 27 23 6 11 17 38 29 31 16 28 12 13 20 23 32 22 13 17 9 17 24 13 16 30 37 18 26 19 7 7 14 36 29 30 21 36 31 32 29 22 22 36 25 32 31 25 23 27 29 18 28 18 25 32 21 48 28 27 30 13 7 31 13 17 17 21 37 37 26 16 15 7 15 6 15 22 16 24 25 24 6 13 11 21 9 4 6 29 29 13 15 23 7 21 25 16 21 20 6 5 6 10 6 23 24 28 21 14 19 28 27 28 27 23 5 5 19 15 27 28 14 9 11 8 12 3 5 30 12 14 12 28 28 24 29 24 27 15 5 6 5 3 4 5 10 8 22 13 4 5 5 7 27 19 6 10 5 4 6 14 22 28 7 14 12 13 7 8 18 9 9 23 16 17 4 3 3 3 2 5 12 7 3 4 4 6 4 7 16 4 4 7 27 25 5 10 16 19 22 18 7 23

Alignment Information

BAC End 1

BAC End 2

seq1: chr17_89057249_89057738
seq2: B6Ng01-312C21.b_46_535

seq1  GAATTCATGCGTATTAGCAGTATCTTAGTGGTGAAGGAGAATTGATGGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGCGTATTAGCAGTATCTTAGTGGTGAAGGAGAATTGATGGTG  50

seq1  CAAAGAAGAGTGAGAGAGTGATAGAGCGAGAGCGAGAGCGAGAGCGAGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGAAGAGTGAGAGAGTGATAGAGCGAGAGCGAGAGCGAGAGCGAGAG  100

seq1  CGAGAGCGAGAGCGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGAGCGAGAGCGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  150

seq1  AGAGATATTACAGTGTTAGGTCATAGGAGGAATGAAGGGCCCTGGCTGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATATTACAGTGTTAGGTCATAGGAGGAATGAAGGGCCCTGGCTGAC  200

seq1  TTAGGTCAGAGTACAGTTCTGGCAAGGGGAAGGAGTAGCCAGCGCAGAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGTCAGAGTACAGTTCTGGCAAGGGGAAGGAGTAGCCAGCGCAGAGA  250

seq1  GGAATGAATGCCTGCTAGATGCATAGGGTGCTATGTCTTAGTTCTTTTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGAATGCCTGCTAGATGCATAGGGTGCTATGTCTTAGTTCTTTTAC  300

seq1  AGAGGAATGAATGCCTGCTGGATGCATAGGGTGCTATGTCTTAGTTCTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAATGAATGCCTGCTGGATGCATAGGGTGCTATGTCTTAGTTCTAG  350

seq1  CTGTGGCACTTGTGAGGGGTGGGGGTGTCCTCTAGCTGTGGCACTTGTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGCACTTGTGAGGGGTGGGGGTGTCCTCTAGCTGTGGCACTTGTGA  400

seq1  GGGGTGGGGGTGTCCCCTAGCTGTGGCATTTGTGAGGTGTGGGGGTGTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTGGGGGTGTCCCCTAGCTGTGGCATTTGTGAGGTGTGGGGGTGTCC  450

seq1  CCTAGCTGTGGCACTTGTGAGGTGTGGGGGTGTCCCCTAG  490
      |||||||||||||||||||||||||||||||||||| |||
seq2  CCTAGCTGTGGCACTTGTGAGGTGTGGGGGTGTCCCTTAG  490

seq1: chr17_89203009_89204122
seq2: B6Ng01-312C21.g_68_1182 (reverse)

seq1  CCTGCA-TAAATGAAGCAGAGCAAGAACACCT-CAAGGCCTTTTGTGCAT  48
      |||||| ||||||| |||||||||| |||||| |||||||||||||||||
seq2  CCTGCATTAAATGAGGCAGAGCAAG-ACACCTCCAAGGCCTTTTGTGCAT  49

seq1  TTCCTTTTTGCTCTGTGTATGGTGCTTGTCCAGGTCAATGTCAGAGGAGC  98
      ||| |||| |||||||||||||||| ||||||||||||||||||||||||
seq2  TTCATTTTGGCTCTGTGTATGGTGC-TGTCCAGGTCAATGTCAGAGGAGC  98

seq1  TTATGTTGCTTCTAAGCAATAAGACCCAGCAGGCAGGGGATTGCTCAGGG  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTTGCTTCTAAGCAATAAGACCCAGCAGGCAGGGGATTGCTCAGGG  148

seq1  ATTAGAGGACAGAAGACTGGATTTGTGTGTCAGAGGCAGGGACCTCTGCC  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGAGGACAGAAGACTGGATTTGTGTGTCAGAGGCAGGGACCTCTGCC  198

seq1  GCTAGGTCAGTATCCAGCATGTGGAAGTTTTGCTTTAAGAAAAGAGAAAT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGGTCAGTATCCAGCATGTGGAAGTTTTGCTTTAAGAAAAGAGAAAT  248

seq1  -CTGAAGTTAGGCCCTGATCAGAGGATCTGAGCTTATCACCAGGAGAGGG  297
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAAGTTAGGCCCTGATCAGAGGATCTGAGCTTATCACCAGGAGAGGG  298

seq1  CTGAAGTTTCTTAGAGGGTGGAAGGTGAACACTCAAGGAAGGAATCCGAG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGTTTCTTAGAGGGTGGAAGGTGAACACTCAAGGAAGGAATCCGAG  348

seq1  TTGTCAGAATCCGATGCTGGGCCTTAGGGTGTTTGGAAACAATATACTGC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCAGAATCCGATGCTGGGCCTTAGGGTGTTTGGAAACAATATACTGC  398

seq1  TCCTTGGAGCTGGTCTTACTGTCTTATTTCATGGTGAAGGACAGAAAGAT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGGAGCTGGTCTTACTGTCTTATTTCATGGTGAAGGACAGAAAGAT  448

seq1  CTAAATTGCCTACATTAACACATTAACAAGTGGTTATTCACGCGGCAGAA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATTGCCTACATTAACACATTAACAAGTGGTTATTCACGCGGCAGAA  498

seq1  AAGGAGCTCTTGTCTTTATAAGAATTTGTGTGCCATCTATTTACAGGGTA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGCTCTTGTCTTTATAAGAATTTGTGTGCCATCTATTTACAGGGTA  548

seq1  TTTGGGCTTTCATTTACTGGCAGAATTTGTTTTGTAGATCGAGTACATAC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGCTTTCATTTACTGGCAGAATTTGTTTTGTAGATCGAGTACATAC  598

seq1  TTTAAACTTTTAAGGAAAACAGCATCTGTGGAAGGGAATTTGTGCCCTCG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAACTTTTAAGGAAAACAGCATCTGTGGAAGGGAATTTGTGCCCTCG  648

seq1  TGCACCGTCCTCTCCTTCTCTGCCCATCTCTTCTCTCTCTGTGAGACCTA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACCGTCCTCTCCTTCTCTGCCCATCTCTTCTCTCTCTGTGAGACCTA  698

seq1  CAAAGACCACACAACTTGGCCGATGTTGAAGAGCTCAGTGGAAAATTCAG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGACCACACAACTTGGCCGATGTTGAAGAGCTCAGTGGAAAATTCAG  748

seq1  TGTTGATGAGGTTCCCCACACAGGTTCAGCTTGCAGTGGATTCTGGACTG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGATGAGGTTCCCCACACAGGTTCAGCTTGCAGTGGATTCTGGACTG  798

seq1  GGCTGCAGAGACTTGAGTTCTGGTCCAGATTCTTTTCTTTGTTGCTGCAT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGCAGAGACTTGAGTTCTGGTCCAGATTCTTTTCTTTGTTGCTGCAT  848

seq1  TGGTTTGGCCAAGTGTCAGAATGCCTGGCATTGGGTGGACTTCAGGCCCA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTGGCCAAGTGTCAGAATGCCTGGCATTGGGTGGACTTCAGGCCCA  898

seq1  TCTGACTGTGTCTTCCTTTGCTTTTGTGTTTTGACAACGATGTCCCTAAC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACTGTGTCTTCCTTTGCTTTTGTGTTTTGACAACGATGTCCCTAAC  948

seq1  TGATGAGTTTCTAGTCCCTTCACGTTCTGCACCTCTGTGTGCCCATCTGT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGAGTTTCTAGTCCCTTCACGTTCTGCACCTCTGTGTGCCCATCTGT  998

seq1  GAAGCCCTGTGCAGGTCCACTGTAAAGAGTAACTGATCTGCAGTGCGAAT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCCCTGTGCAGGTCCACTGTAAAGAGTAACTGATCTGCAGTGCGAAT  1048

seq1  GGGGAACCTAGATGGTTTCTCTGAGGGTCCAGAAAGAAATGTCCTGTTGT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAACCTAGATGGTTTCTCTGAGGGTCCAGAAAGAAATGTCCTGTTGT  1098

seq1  CTTTGAATACTGAATTC  1114
      |||||||||||||||||
seq2  CTTTGAATACTGAATTC  1115

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Alignment Information