BAC Information

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BAC

Clone NameB6Ng01-315O08
Chromosome17 (Build37)
Map Location 76,899,816 - 76,999,014
singlet/doubletdoublet
Overlap genenone
Upstream geneRasgrp3, 2810405J04Rik, LOC668787, LOC100043885, LOC100043886
Downstream geneEG624348, LOC545234
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-315O08.bB6Ng01-315O08.g
ACCGA106425GA106426
length1,1391,046
definitionB6Ng01-315O08.b B6Ng01-315O08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(76,899,816 - 76,900,918)(76,997,967 - 76,999,014)
sequence
gaattccaagctcgtaggcttcaaggattttctaggacgttggaacactg
gtggaggctcacttatgttaaaattcaatctttaaaggcacttataataa
aacaatactgaagagagcatgtggatccatataccagactaacacggaaa
tagggcttgagtatacaggttatgagaatgccaagatccaggaggcatag
tatccttgaaacactttgcctcatcagtgcttccaggcctcttggcctgt
caagtagacttcactggagtgggcgtagcagggggctcaaacaacccttt
aacagcagttggatatcagatatcatgactatcagatatttacattataa
gtcattactagcaaaattacagttgtaaattaataccaaaataattttat
ggtgggagttcaccacagcatgaggaactgtattaaagatattaaagagt
ccagcattagggaggttgagaaccactgatttatactatcctgaaaatct
tatattgcgtgcttcaattgttttctcaatcaagagcatttgtttacagc
ttcctatggatattagctagatacataattgataaagtatcttgcttgtc
tcctgttgaataatatttccttttccaattctaattctgaaaaaatgcct
catatgtactagtccaattgcttgctacctggtcagttactgcaggtgac
ttcacatgtcatctatcaagcatgaaatctttaggtctatccatactcaa
tatgtatttggtcataatgtatcctatttcaaaaattcaatagttttctt
attataaagggaaacaccaactgtttgcctggatacatctctccatccaa
tacttcaataagcaaatagttacttttcttttggaaggactcatctttac
acaactttgtctaagttcccattttcttgaagcccatgtgggttctgggg
attttagtcctgaccatgacattcttcttttacaacataaaaactctggg
ggctgtaattcataaagaccttaaatacattcacagtactgctcattttc
ttatcattcttttaactggaggtaacatgaacagaagttatatctatatt
tagtgtgttgcaacatggtttggtatactgcccattgtt

gaattcttttgtttatactttctaaggaaaaggtagtcatgcataggttt
attcttggaattttcctaggaatacatggtatttaggaaactgaattcat
gctctgggatcatgctctgtggtacgcttaaaggaaaacaaaacaattcc
aggtacttgataaaaaaatcaccaagaatgcctttctcagtgctggtaca
ttatttcctttaaattacactaaaatactggaagaagactaatttacaaa
tgaatagtgcttgactccgagttctagaaatctgtgatggttaatcttga
ttcccaactttattatattgaaaactttttgataaaataaacaacccatg
ggtcttggtatttctgtgatagtctttctagggagaagtaacgatgtggg
aaagacaaccctgactataaacagaatgattccataggctgagggagcac
accagacagaagaaatcctgtaatatcttcacttgttctctctctctctc
tccctctttccttttttttttttttttttttttttttttttttgtctctt
tatggcagtagtgatatgtgtcaatatgctctgtcatgttcatctcatga
tgggctgaaacttttgaaacagtgatccaaaatataccattcctcttcca
agtatttagcttaagtagcttaggtatttttgacacagcaataagaagag
tgatatcagcttagaagtggagggtacagaaatgacaatggccacctttg
ctatgggctaccaaaggcagcacagcacacagcatgccaggaaatgagga
ttttgcatggatatattttcttttcagacctttctacacctgtcttataa
aatcattggttttcaatcatatgaactttacactaatgggccttgtttaa
tcataagtctctgtgccatgtccagatttaataccataggttatattaat
ttcatatctcgtacactgacatgtaacattagttatagtagatgactatc
aaacaatagtagagactttctaaaatacgttatttttttcttttag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_76899816_76900918
seq2: B6Ng01-315O08.b_77_1190

seq1  GATTTTCTAGGACGTTGGAACACTGGTGGAGGCTCACTTATGTTAAAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTCTAGGACGTTGGAACACTGGTGGAGGCTCACTTATGTTAAAATT  50

seq1  CAATCTTTAAAGGCACTTATAATAAAACAATACTGAAGAGAGCATGTGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCTTTAAAGGCACTTATAATAAAACAATACTGAAGAGAGCATGTGGA  100

seq1  TCCATATACCAGACTAACACGGAAATAGGGCTTGAGTATACAGGTTATGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATATACCAGACTAACACGGAAATAGGGCTTGAGTATACAGGTTATGA  150

seq1  GAATGCCAAGATCCAGGAGGCATAGTATCCTTGAAACACTTTGCCTCATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGCCAAGATCCAGGAGGCATAGTATCCTTGAAACACTTTGCCTCATC  200

seq1  AGTGCTTCCAGGCCTCTTGGCCTGTCAAGTAGACTTCACTGGAGTGGGCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTTCCAGGCCTCTTGGCCTGTCAAGTAGACTTCACTGGAGTGGGCG  250

seq1  TAGCAGGGGGCTCAAACAACCCTTTAACAGCAGTTGGATATCAGATATCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAGGGGGCTCAAACAACCCTTTAACAGCAGTTGGATATCAGATATCA  300

seq1  TGACTATCAGATATTTACATTATAAGTCATTACTAGCAAAATTACAGTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTATCAGATATTTACATTATAAGTCATTACTAGCAAAATTACAGTTG  350

seq1  TAAATTAATACCAAAATAATTTTATGGTGGGAGTTCACCACAGCATGAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTAATACCAAAATAATTTTATGGTGGGAGTTCACCACAGCATGAGG  400

seq1  AACTGTATTAAAGATATTAAAGAGTCCAGCATTAGGGAGGTTGAGAACCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTATTAAAGATATTAAAGAGTCCAGCATTAGGGAGGTTGAGAACCA  450

seq1  CTGATTTATACTATCCTGAAAATCTTATATTGCGTGCTTCAATTGTTTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTTATACTATCCTGAAAATCTTATATTGCGTGCTTCAATTGTTTTC  500

seq1  TCAATCAAGAGCATTTGTTTACAGCTTCCTATGGATATTAGCTAGATACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATCAAGAGCATTTGTTTACAGCTTCCTATGGATATTAGCTAGATACA  550

seq1  TAATTGATAAAGTATCTTGCTTGTCTCCTGTTGAATAATATTTCCTTTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTGATAAAGTATCTTGCTTGTCTCCTGTTGAATAATATTTCCTTTTC  600

seq1  CAATTCTAATTCTGAAAAAATGCCTCATATGTACTAGTCCAATTGCTTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTCTAATTCTGAAAAAATGCCTCATATGTACTAGTCCAATTGCTTGC  650

seq1  TACCTGGTCAGTTACTGCAGGTGACTTCACATGTCATCTATCAAGCATGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTGGTCAGTTACTGCAGGTGACTTCACATGTCATCTATCAAGCATGA  700

seq1  AATCTTTAGGTCTATCCATACTCAATATGTATTTGGTCATAATGTATCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTTAGGTCTATCCATACTCAATATGTATTTGGTCATAATGTATCCT  750

seq1  ATTTCAAAAATTCAATAGTTTTCTTATTATAAAGGGAAACACCAACTGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAAAAATTCAATAGTTTTCTTATTATAAAGGGAAACACCAACTGTT  800

seq1  TGCCTGGATACATCTCTCCATCCAATACTTCAATAAGCAAATAGTTACTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGGATACATCTCTCCATCCAATACTTCAATAAGCAAATAGTTACTT  850

seq1  TTCTTTTGGAAGGACTCATCTTTACACAACTTTGTCTAAGTTCCCA-TTT  899
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TTCTTTTGGAAGGACTCATCTTTACACAACTTTGTCTAAGTTCCCATTTT  900

seq1  CTTGAAGCCCATGT-GGTTCTGGGGATTTTAGTCCTGACCATGACATTCT  948
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CTTGAAGCCCATGTGGGTTCTGGGGATTTTAGTCCTGACCATGACATTCT  950

seq1  --CTTTACAACAATAAAAACTCT-GGGGCTGTAATTCATAAAGACC-TAA  994
         |||||||| ||||||||||| |||||||||||||||||||||| |||
seq2  TCTTTTACAAC-ATAAAAACTCTGGGGGCTGTAATTCATAAAGACCTTAA  999

seq1  ATACATTCACAGTACTGCTCATTT--CTATCATTCCTTTTAACTGGAGGT  1042
      ||||||||||||||||||||||||   ||||||| |||||||||||||||
seq2  ATACATTCACAGTACTGCTCATTTTCTTATCATT-CTTTTAACTGGAGGT  1048

seq1  -ACATG-ACAGAAGTTATATCTTATA-TTAGTGTGTTGCACAATG--TTT  1087
       ||||| |||||||||||||| |||| |||||||||||||  |||  || 
seq2  AACATGAACAGAAGTTATATC-TATATTTAGTGTGTTGCAACATGGTTTG  1097

seq1  GTATACTG-CCATTGTT  1103
      |||||||| ||||||||
seq2  GTATACTGCCCATTGTT  1114


seq1: chr17_76997967_76999014
seq2: B6Ng01-315O08.g_68_1113 (reverse)

seq1  CTAAAAGAAAAAAATAACGTTATTTTAGAAAGTCTCTACTATTGTTTGGA  50
      ||||||||||||||||||| ||||||||||||||||||||||||||| ||
seq2  CTAAAAGAAAAAAATAACG-TATTTTAGAAAGTCTCTACTATTGTTT-GA  48

seq1  TATGTCATCTACTATTAACTAATGGTACATGTCAAGTGTACCGAGATATT  100
      || ||||||||||| ||||||||| |||||||| |||||| ||||||| |
seq2  TA-GTCATCTACTA-TAACTAATGTTACATGTC-AGTGTA-CGAGATA-T  93

seq1  GAAATTTAATATAA-CTATGGTATTTAAAATCTGGACATGG-ACAGAGAA  148
      |||| ||||||||| ||||||||||  |||||||||||||| ||||||| 
seq2  GAAA-TTAATATAACCTATGGTATT--AAATCTGGACATGGCACAGAGAC  140

seq1  TTATGATTAAACAAGG-CCATTAGTGTAAAGTTCATATGATTGAAAACCA  197
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TTATGATTAAACAAGGCCCATTAGTGTAAAGTTCATATGATTGAAAACCA  190

seq1  ATGATTTTATAAGACAGGTGTAG-AAGGTCTGAAA--GAAATATATCCAT  244
      ||||||||||||||||||||||| |||||||||||   ||||||||||||
seq2  ATGATTTTATAAGACAGGTGTAGAAAGGTCTGAAAAGAAAATATATCCAT  240

seq1  GCAAAATCCTCATTTCCTGGCATGCTGTGTGCTGTGCTGCC-TTGGTAGC  293
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GCAAAATCCTCATTTCCTGGCATGCTGTGTGCTGTGCTGCCTTTGGTAGC  290

seq1  CCATAGC-AAGGTGGCCATTGTCATTTCTGTACCCTCCACTTCTAAGCTG  342
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAGCAAAGGTGGCCATTGTCATTTCTGTACCCTCCACTTCTAAGCTG  340

seq1  ATATCACTCTTCTTATTGCTGTGTCAAAAATACCTAAGCTACTTAAGCTA  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCACTCTTCTTATTGCTGTGTCAAAAATACCTAAGCTACTTAAGCTA  390

seq1  AATACTTGGAAGAGGAATGGTATATTTTGGATCACTGTTTCAAAAGTTTC  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTTGGAAGAGGAATGGTATATTTTGGATCACTGTTTCAAAAGTTTC  440

seq1  AGCCCATCATGAGATGAACATGACAGAGCATATTGACACATATCACTACT  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCATCATGAGATGAACATGACAGAGCATATTGACACATATCACTACT  490

seq1  GCCATAAGGGGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAAA  542
      ||||||| | | ||||||||||||||||||||||||||||||||||||||
seq2  GCCATAAAGAGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAAA  540

seq1  GAGGGAGAGAGAGAGAGAGAACAAGTGAAGATATTACAGGATTTCTTCTG  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGAGAGAGAGAGAGAGAACAAGTGAAGATATTACAGGATTTCTTCTG  590

seq1  TCTGGTGTGCTCCCTCAGCCTATGGAATCATTCTGTTTATAGTCAGGGTT  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTGTGCTCCCTCAGCCTATGGAATCATTCTGTTTATAGTCAGGGTT  640

seq1  GTCTTTCCCACATCGTTACTTCTCCCTAGAAAGACTATCACAGAAATACC  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTCCCACATCGTTACTTCTCCCTAGAAAGACTATCACAGAAATACC  690

seq1  AAGACCCATGGGTTGTTTATTTTATCAAAAAGTTTTCAATATAATAAAGT  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACCCATGGGTTGTTTATTTTATCAAAAAGTTTTCAATATAATAAAGT  740

seq1  TGGGAATCAAGATTAACCATCACAGATTTCTAGAACTCGGAGTCAAGCAC  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAATCAAGATTAACCATCACAGATTTCTAGAACTCGGAGTCAAGCAC  790

seq1  TATTCATTTGTAAATTAGTCTTCTTCCAGTATTTTAGTGTAATTTAAAGG  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCATTTGTAAATTAGTCTTCTTCCAGTATTTTAGTGTAATTTAAAGG  840

seq1  AAATAATGTACCAGCACTGAGAAAGGCATTCTTGGTGATTTTTTTATCAA  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATGTACCAGCACTGAGAAAGGCATTCTTGGTGATTTTTTTATCAA  890

seq1  GTACCTGGAATTGTTTTGTTTTCCTTTAAGCGTACCACAGAGCATGATCC  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCTGGAATTGTTTTGTTTTCCTTTAAGCGTACCACAGAGCATGATCC  940

seq1  CAGAGCATGAATTCAGTTTCCTAAATACCATGTATTCCTAGGAAAATTCC  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCATGAATTCAGTTTCCTAAATACCATGTATTCCTAGGAAAATTCC  990

seq1  AAGAATAAACCTATGCATGACTACCTTTTCCTTAGAAAGTATAAACAAAA  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATAAACCTATGCATGACTACCTTTTCCTTAGAAAGTATAAACAAAA  1040

seq1  GAATTC  1048
      ||||||
seq2  GAATTC  1046


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