BAC Information

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BAC

Clone NameB6Ng01-319H13
Chromosome17 (Build37)
Map Location 76,835,767 - 76,836,866
singlet/doubletsinglet
Overlap genenone
Upstream geneRasgrp3, 2810405J04Rik, LOC668787, LOC100043885, LOC100043886
Downstream geneEG624348, LOC545234
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-319H13.bB6Ng01-319H13.g
ACCGA109091GA109092
length1,0991,192
definitionB6Ng01-319H13.b B6Ng01-319H13.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgttcagaatgggggctgaagcataataggtaagtatatgaact
ctgaatagtttaggaatatgtggggaattgaggtgtagaggtcacaagga
aggtgaaaaacagctgaattcccagtgctcagaaataataatttaaaatt
ttaaggtctagcataaacttggagtccaaattctgttagctaatatagta
tacatagaagtacattacatgaaaatcatggtgcgacagtaacaaaaaga
aaattaaaaggatcatcctaaaggctttatgaaatataggagggcatcat
tatggttgcccaaagtcaaacgacagatagttagaacacagaattaccag
gcaaagtcttatctgcaagtaatcactctgggtccatccataataatgcc
atatatctatgtgttctgtcattatgctgatactaagttcttacttataa
cttcggtgtgtctttgttcagactgagactccaagattaaaaaaaaaata
gtccaaattcaattttctacatattggcaggatatatgaattgcacactt
atattccctaaatctccattattctactaaatcactattctcaccactta
gagaaataggaatacaagtctggatgattataaaaatgcagtcgtattta
ctagttatatttgtcacagacaattataattatttcatttatagcatttt
atctaacattcatggacacacacacagagcacacacaaagaagcttgcat
aacatacttttactttacaaaagaaatgaatgtattcttcacaccttcaa
tgtcataaaactagggagtttgaattcatgaggtcagtctgattctacaa
gtcagttgatagactccttaatcatcacagcgtgattgtgcccacacaat
aacctactcttctgaagctagttgcataaattagcaacactaaaacattt
tatttattggctttccaacaggataaaaagcattattatcagagataaag
ggaagagatagagaacaaagcagctgctgagagaagtgaagtgggtgaca
cttggagtattgagatctttcatggatcgtgactacaagaaggtgacaa

gaattctttgtttagctctgagtcccattttttaaaggggttatttgatt
ttctggagtctaccttcttgggttctttatatatattggatattagtccc
ctatctgatttaggataggaaaagaacccttcccaatctgtttgttgttt
ttttgtcttattgacagtgtcttttgccttgatgaagctttacattttta
tgaggtctcatttgtggattcttgatcttacagcactagacattgctgtt
ctattcaggaattttccccctgtgcccatatctttgaggtttttccccaa
tttctcctctacaagtttcagtgtctctggttttatgtggatttccttga
tccacttagatttgaccttaaggcaaggagagaggaaggaatcaattcac
attctttgatgtgataactgccagttgtgtcagcaccatttgttgaaaat
gatgtcttttttccactggatggttttagctcccttgtcaaagatcaaat
ggccataggtgtgtgggttcatttatggatcttcaattctattccattgg
tctacttgtctgtcgctatatgagtaccatgcaatttttatcacaattgc
tctgtagtacagctttaggtcaggtgtggtgattccaacagaggttcttt
tatcattgagaagagttttgttatcctaggatttttgttattccagatga
atttgcaaattgcccttaataattcgttgaagaattgagttggaattttg
atggggattgctttgaatctgtagattgcccttggccagatagccatttt
tattacattgatcatgacatttcatgagcatgggagatctttccatcttc
tgagatctttaatttctttcttcatagacttgaagttgttatcatacata
tctttcatttccttagttagtcacaccaagatattttatattatttgtga
ctattgtgaaggatgtgttttcccaatttctttctcagcctgttttatcc
ttgtatagaagaaaatccattgacttgttgagtaattttatatccagaaa
cttcactgagctgttttcagtttaggactctctgtgattttaggtcactt
tatatataggaatcatatcattgcaaaggtaatgactcttcctccaatgg
attcactgaatctctatggtgtgacaaaatggctctctgcga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_76835767_76836866
seq2: B6Ng01-319H13.b_47_1145 (reverse)

seq1  TTGTCACTTTCTTGTAGTCCACGAT-CATGAAAGAACCTCATACTCAAGT  49
      ||||||| |||||||||| |||||| ||||||||| |   |||||| |  
seq2  TTGTCACCTTCTTGTAGT-CACGATCCATGAAAGATCTCAATACTCCAAG  49

seq1  TGTCACCCACTTCACTTCTCTCAGCAGCTGCTTTGTTCTCTATCTTCTTC  99
      |||||||||||||||||||||||||||||||||||||||||||||  | |
seq2  TGTCACCCACTTCACTTCTCTCAGCAGCTGCTTTGTTCTCTATCTCTTCC  99

seq1  CTTTATCTCTGATTAATAATTGCTTTTTATCCTGTTGGAAAGCCAATAAA  149
      |||||||||||| |||||| ||||||||||||||||||||||||||||||
seq2  CTTTATCTCTGA-TAATAA-TGCTTTTTATCCTGTTGGAAAGCCAATAAA  147

seq1  T-AAATGTTTTAGTGTTGCTAATTTATGCAACTAGCTTCAGAAGAGTAGG  198
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATGTTTTAGTGTTGCTAATTTATGCAACTAGCTTCAGAAGAGTAGG  197

seq1  TTATTGTGTTGGCACAATCACGCTGTGATGATTAAGGAGTCTATCAACTG  248
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGTGTGGGCACAATCACGCTGTGATGATTAAGGAGTCTATCAACTG  247

seq1  ACTTGTAGAATCAGACTGACCTCATGAATTCAAACTCCCTAGTTTTATGA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGTAGAATCAGACTGACCTCATGAATTCAAACTCCCTAGTTTTATGA  297

seq1  CATTGAAGGTGTGAAGAATACATTCATTTCTTTTGTAAAGTAAAAGTATG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGAAGGTGTGAAGAATACATTCATTTCTTTTGTAAAGTAAAAGTATG  347

seq1  TTATGCAAGCTTCTTTGTGTGTGCTCTGTGTGTGTGTCCATGAATGTTAG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGCAAGCTTCTTTGTGTGTGCTCTGTGTGTGTGTCCATGAATGTTAG  397

seq1  ATAAAATGCTATAAATGAAATAATTATAATTGTCTGTGACAAATATAACT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATGCTATAAATGAAATAATTATAATTGTCTGTGACAAATATAACT  447

seq1  AGTAAATACGACTGCATTTTTATAATCATCCAGACTTGTATTCCTATTTC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAATACGACTGCATTTTTATAATCATCCAGACTTGTATTCCTATTTC  497

seq1  TCTAAGTGGTGAGAATAGTGATTTAGTAGAATAATGGAGATTTAGGGAAT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAGTGGTGAGAATAGTGATTTAGTAGAATAATGGAGATTTAGGGAAT  547

seq1  ATAAGTGTGCAATTCATATATCCTGCCAATATGTAGAAAATTGAATTTGG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGTGTGCAATTCATATATCCTGCCAATATGTAGAAAATTGAATTTGG  597

seq1  ACTATTTTTTTTTTAATCTTGGAGTCTCAGTCTGAACAAAGACACACCGA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTTTTTTTTTAATCTTGGAGTCTCAGTCTGAACAAAGACACACCGA  647

seq1  AGTTATAAGTAAGAACTTAGTATCAGCATAATGACAGAACACATAGATAT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATAAGTAAGAACTTAGTATCAGCATAATGACAGAACACATAGATAT  697

seq1  ATGGCATTATTATGGATGGACCCAGAGTGATTACTTGCAGATAAGACTTT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCATTATTATGGATGGACCCAGAGTGATTACTTGCAGATAAGACTTT  747

seq1  GCCTGGTAATTCTGTGTTCTAACTATCTGTCGTTTGACTTTGGGCAACCA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGGTAATTCTGTGTTCTAACTATCTGTCGTTTGACTTTGGGCAACCA  797

seq1  TAATGATGCCCTCCTATATTTCATAAAGCCTTTAGGATGATCCTTTTAAT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGATGCCCTCCTATATTTCATAAAGCCTTTAGGATGATCCTTTTAAT  847

seq1  TTTCTTTTTGTTACTGTCGCACCATGATTTTCATGTAATGTACTTCTATG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTTTGTTACTGTCGCACCATGATTTTCATGTAATGTACTTCTATG  897

seq1  TATACTATATTAGCTAACAGAATTTGGACTCCAAGTTTATGCTAGACCTT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTATATTAGCTAACAGAATTTGGACTCCAAGTTTATGCTAGACCTT  947

seq1  AAAATTTTAAATTATTATTTCTGAGCACTGGGAATTCAGCTGTTTTTCAC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTTTAAATTATTATTTCTGAGCACTGGGAATTCAGCTGTTTTTCAC  997

seq1  CTTCCTTGTGACCTCTACACCTCAATTCCCCACATATTCCTAAACTATTC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTTGTGACCTCTACACCTCAATTCCCCACATATTCCTAAACTATTC  1047

seq1  AGAGTTCATATACTTACCTATTATGCTTCAGCCCCCATTCTGAACAGAAT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTCATATACTTACCTATTATGCTTCAGCCCCCATTCTGAACAGAAT  1097

seq1  TC  1100
      ||
seq2  TC  1099


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