BAC Information

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BAC

Clone NameB6Ng01-319N02
Chromosome17 (Build37)
Map Location 38,671,028 - 38,672,139
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr112, Olfr113, Olfr114, Olfr115, Olfr116, Olfr117, Olfr118, Olfr119, Scocp, Olfr120, Olfr1558-ps1, Olfr121, Olfr122, Olfr123, Olfr124, Olfr125, LOC672822, Olfr126, Olfr127, Olfr128, Ppia-ps17_697.1, Olfr761, Olfr1552-ps1, LOC100043265, Olfr129, Olfr130, Olfr131, Olfr132, Olfr133, Olfr134, Olfr135, Olfr138, Olfr137, Olfr762-ps1, Olfr136, LOC626985
Downstream geneLOC100043297
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-319N02.bB6Ng01-319N02.g
ACCGA109355GA109356
length1,1111,187
definitionB6Ng01-319N02.b B6Ng01-319N02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttagataatgagaagtaatgaggaattgtaaatcaaataaact
ttttctctgcgattcttttgccataatgtttcattgcaacaaaagaaacc
ctaaaagaggattttagtagggttttgggttattcctggaacagatatga
gtgttttaggatccgtgtggaagcattttgaattttatttatttatttat
ttatttatttatttatttatttaggctagtttgttgatagctctgtaagg
ggttctgtgggaaactgaaatataagcatattgggagtggtatacagtat
ataagtttggcgtatgacgtttcaaagggaagttaatggcttgtagaaca
tctattcacaattaaaattatataaaatattaatttggaagttaatttta
tatgcataaataataggttttcataggcttatttagcaatcttttagttt
gcttacataaatgtctaacacgccttccctacaccttcatgaaccagtcc
ttttacaatgattaacccctgttataacctgagttctttcataccatggg
tgctctaaacctatgtttcgttacttttcctgattgcaaggttttaggat
tccatataatttttacccattctatatttaattggccttttccttccact
gcttcccctccattttcttcttttgtactttttttgcacagattggggtc
cttttcaattcattttacacatgttctagtatcccacctttattaatgaa
tatccgttaaaatactatttgtagtaaactggcttcctccacatttacta
tagtccaaacataaaagtacataaatttatcaccattcataagaaagaaa
aaaattgtatttgtgtgtatatgcctgagaaacatcattcaggttagttt
attaaagttctttccaatttccaacaattttcagtggagcaactgagtca
aataaaacctactataaatttcacagtgatatttttctgtcattatgtca
aacatcagaatcaaggacatatttctttggagctctcgtcctcctaatga
tttttgtaccatgaataaacctacataaacagggaagaacgtaagaacaa
aaaattgacga
gaattcatgcccagtcactgcccatctcgtggcatagtaatggggtgatg
ggcaatcaactaatcaggtgctgtcacgccacatcaggtgctgaaatgtc
acgttgcgggctatataagcagcgccattttccgggttcagggtcttcct
tatgttgaagcaataaaagctttgctgtaaaaggatccggttgtccgagt
gaattcttgccagtgagatactagcacgggtgagaagtggcaccgagaaa
cccgggaatttatcatcaccaggcgctgataggagaccccccgtttcacg
gggcaggttcagaactactggacactttacagctctgcaaggtacataca
gtcttgaaatttctccagagttagacacccttttggttgttttcacggca
attattccttccctttcggtttcgttttgcttctaccgctggaactgctg
actggttctcagtcccagtcaggcaaggacagcgaccagtattgctgact
cagtcgcggtcaggcctggacagcgaccagtatgggggcctcccactctg
tggtgaccgccttacggtcggtcctgaagcagcgtggcttgaaagtcgcc
accaagacactagaaggctttgtaaaaaaggtagatcacatagcaccgtg
gtttgcatgctcagggtccttaactatcccctcttgggagaaaatcaagg
gagatttagctagggaactggggaacggcaaacataaagcaggaaccatg
ccattgtggaagctgataagaccgtgcttaaaggatgaggaatgccaata
agtggttaaggcagggcagaaaattctggatgaaattcaagacagtctat
cagaggtagagtggggagagagattaggagcaaaacagacacatggtgca
tcaattaagcatacaggcctttccacggaccttgagcccgaggaaaagat
atgttgggaaagaatacctggggtggagtttgagagagagaaaatgagag
agaagatcatcagcggagtcctagagagaccttatacccaccactagatg
cgttaagactagcttctagtagctcagatcgatgaggactagccctctga
gaacagactggaagaaggaaccgactgtttgaggaacggttacacagata
atgcaagtctaattcagtctcgaaaaaggtccaatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_38671028_38672139
seq2: B6Ng01-319N02.b_48_1158 (reverse)

seq1  TCGTCAA-TTTTTGTCTTTCCTGTCTTCCCTGTTTATGTA-GTTTATTCA  48
      ||||||| |||||||  || |  ||||||||||||||||| |||||||| 
seq2  TCGTCAATTTTTTGTTCTTACGTTCTTCCCTGTTTATGTAGGTTTATTC-  49

seq1  ATGGTTACAAAATCATTAAGGAGGACGAGGAGCT-CAAAGAAATTATGTC  97
      |||||   ||||||||| |||||||||| ||||| |||||||| ||||||
seq2  ATGGTACAAAAATCATT-AGGAGGACGA-GAGCTCCAAAGAAA-TATGTC  96

seq1  CTTGATTCTGATGTTTGACATAATGACAGAAAAATATCACTGTGAAATTT  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGATTCTGATGTTTGACATAATGACAGAAAAATATCACTGTGAAATTT  146

seq1  ATAGTAGGTTTTATTTGACTCAGTTGCTCCACTGAAAATTGTTGGAAATT  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTAGGTTTTATTTGACTCAGTTGCTCCACTGAAAATTGTTGGAAATT  196

seq1  GGAAAGAACTTTAATAAACTAACCTGAATGATGTTTCTCAGGCATATACA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGAACTTTAATAAACTAACCTGAATGATGTTTCTCAGGCATATACA  246

seq1  CACAAATACAATTTTTTTCTTTCTTATGAATGGTGATAAATTTATGTACT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAATACAATTTTTTTCTTTCTTATGAATGGTGATAAATTTATGTACT  296

seq1  TTTATGTTTGGACTATAGTAAATGTGGAGGAAGCCAGTTTACTACAAATA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGTTTGGACTATAGTAAATGTGGAGGAAGCCAGTTTACTACAAATA  346

seq1  GTATTTTAACGGATATTCATTAATAAAGGTGGGATACTAGAACATGTGTA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTTAACGGATATTCATTAATAAAGGTGGGATACTAGAACATGTGTA  396

seq1  AAATGAATTGAAAAGGACCCCAATCTGTGCAAAAAAAGTACAAAAGAAGA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAATTGAAAAGGACCCCAATCTGTGCAAAAAAAGTACAAAAGAAGA  446

seq1  AAATGGAGGGGAAGCAGTGGAAGGAAAAGGCCAATTAAATATAGAATGGG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGAGGGGAAGCAGTGGAAGGAAAAGGCCAATTAAATATAGAATGGG  496

seq1  TAAAAATTATATGGAATCCTAAAACCTTGCAATCAGGAAAAGTAACGAAA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATTATATGGAATCCTAAAACCTTGCAATCAGGAAAAGTAACGAAA  546

seq1  CATAGGTTTAGAGCACCCATGGTATGAAAGAACTCAGGTTATAACAGGGG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGGTTTAGAGCACCCATGGTATGAAAGAACTCAGGTTATAACAGGGG  596

seq1  TTAATCATTGTAAAAGGACTGGTTCATGAAGGTGTAGGGAAGGCGTGTTA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATCATTGTAAAAGGACTGGTTCATGAAGGTGTAGGGAAGGCGTGTTA  646

seq1  GACATTTATGTAAGCAAACTAAAAGATTGCTAAATAAGCCTATGAAAACC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTTATGTAAGCAAACTAAAAGATTGCTAAATAAGCCTATGAAAACC  696

seq1  TATTATTTATGCATATAAAATTAACTTCCAAATTAATATTTTATATAATT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATTTATGCATATAAAATTAACTTCCAAATTAATATTTTATATAATT  746

seq1  TTAATTGTGAATAGATGTTCTACAAGCCATTAACTTCCCTTTGAAACGTC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTGTGAATAGATGTTCTACAAGCCATTAACTTCCCTTTGAAACGTC  796

seq1  ATACGCCAAACTTATATACTGTATACCACTCCCAATATGCTTATATTTCA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACGCCAAACTTATATACTGTATACCACTCCCAATATGCTTATATTTCA  846

seq1  GTTTCCCACAGAACCCCTTACAGAGCTATCAACAAACTAGCCTAAATAAA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCCCACAGAACCCCTTACAGAGCTATCAACAAACTAGCCTAAATAAA  896

seq1  TAAATAAATAAATAAATAAATAAATAAATAAAATTCAAAATGCTTCCACA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAAATAAATAAATAAATAAATAAATAAAATTCAAAATGCTTCCACA  946

seq1  CGGATCCTAAAACACTCATATCTGTTCCAGGAATAACCCAAAACCCTACT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGATCCTAAAACACTCATATCTGTTCCAGGAATAACCCAAAACCCTACT  996

seq1  AAAATCCTCTTTTAGGGTTTCTTTTGTTGCAATGAAACATTATGGCAAAA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCCTCTTTTAGGGTTTCTTTTGTTGCAATGAAACATTATGGCAAAA  1046

seq1  GAATCGCAGAGAAAAAGTTTATTTGATTTACAATTCCTCATTACTTCTCA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCGCAGAGAAAAAGTTTATTTGATTTACAATTCCTCATTACTTCTCA  1096

seq1  TTATCTAAAGAATTC  1112
      |||||||||||||||
seq2  TTATCTAAAGAATTC  1111