BAC Information

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BAC

Clone NameB6Ng01-324I17
Chromosome17 (Build37)
Map Location 77,222,977 - 77,331,400
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100043885, LOC100043886
Downstream geneEG624348, LOC545234, LOC100043887
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-324I17.bB6Ng01-324I17.g
ACCGA112831GA112832
length1,182958
definitionB6Ng01-324I17.b B6Ng01-324I17.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(77,222,977 - 77,224,183)(77,330,443 - 77,331,400)
sequence
gaattccaatctattaaaaaggttatgtgaactttatacaggcatgagtt
aacacatgggatgtacaggatgtgtacatacataacatttaaaataattt
aatataaaaacatttttggttattctgaataatcaattatcaggtttgag
gcatcacaccaaagactcagactgactatatttaataccttttgcaattt
agatcttctcatgtattcttagaaagaatattagacttttatgaaacttc
acattttctctattctattgtagtcatttgatatcagaccaattttgaga
cacttgattgttaagaactttgtaggaatgtatcacatagtatttcttat
aattcacaatgcttcggtgcctatttatatttttcatttgcaagttggtt
ttccattcatttgtaaaaaagtttttcatattcctttgtcaagtaatgga
tgtcaaaagactgacagtttttctgatgaaaatatgctactcaatcccca
aataagagagaagggaaatggcaaaagtggtaacataacagtgaatattc
tagactaggaaggttgctccatggtaggcatactgtcacacttgtcaagg
gtcatggagtcaatttctccagcctaattcccttcctaaaggaaaggaaa
gaaaaatggaagggatgaaggaaggaaacaagaaaaaatagaatcgaata
aattggaaattctagagaaactttaagagcattactagagatttcagaag
atgggattaggaaactactgaggataaaacagtaacttagtgataaagca
agtattttattactattatgttaataattttgggggttgatcctgtgttt
caccattagcctttctgacagtttgtgcttaatgtcagatgagtatgtaa
agatattttcaccaatcaggaggagaattctccacttggaagtcaaagcc
aggggaaaaagttcatttcaccatttcactatatctttatcattaataca
gtttctaatggtttatgctatgttttctgacttgttatttaatgttatat
tatatttataacattataataagtataacataattgttatttgctatgaa
ttgcagctggaagccagcataaattttcttcactgaaatacttaggaatt
tcatggatgcgtgtttacatattcaggcatga

gaattctttctcatgatttttgattcttatcaattatagtttaaaaaaca
attcttcatttgctatttaaatttcttctttagaaaatagtaagaaagcg
acatgccaatcagtattatgttgtcaaacactagagtgctttcaactaaa
agcagtctatgtcatcgtgctgctgagtggatgattcagtctggaaacaa
aattctagtggcttattaaaaatgctttattccaaatgattctttaatca
ccttatttaattaaaatataattgtctccattaaggaagcactactacta
atttagactttactgtgaatttaatgtttatatactaatatagtcttgaa
attttcataatgttcctaacattcatatactagaccatccttgttctcta
aatatgaaaataatgtacatgtgataaagtgagtctttttgctgcataca
gaattatacacaatttgataagcaaaatgacgttctgaatttcaaattca
tttcattcttgcaaacacgtttttaaattatgtagaaaaatagtctagac
tttcattactcctcatctaagttggagattaatattaacttatttatatt
gtcattctaaaatcagataattgatgctggcacatggtcattaaccaatc
ctttggatgtatttgtcttttcttcacatccaaagtagaaccaacatgaa
catgctcacatgcttgtagcattctgtgattattgtattatttattgctt
taccatatacaaaagagaagagaatgattacatcaaaataaagagactct
ttctacttaccttcttgcattacatgcaaaaaaccacatacacacacaac
acacataagcacgcacacttttatgcacaatcacgcacacacacaactca
caaacacactcatattctctctctctctctctctctctctctctctctct
ctctctct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_77222977_77224183
seq2: B6Ng01-324I17.b_47_1228

seq1  GAATTCCAATCTATTAAAAAGGTTATGTGAACTTTATACAGGCATGAGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAATCTATTAAAAAGGTTATGTGAACTTTATACAGGCATGAGTT  50

seq1  AACACATGGGATGTACAGGATGTGTACATACATAACATTTAAAATAATTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACATGGGATGTACAGGATGTGTACATACATAACATTTAAAATAATTT  100

seq1  AATATAAAAACATTTTTGGTTATTCTGAATAATCAATTATCAGGTTTGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAAAAACATTTTTGGTTATTCTGAATAATCAATTATCAGGTTTGAG  150

seq1  GCATCACACCAAAGACTCAGACTGACTATATTTAATACCTTTTGCAATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCACACCAAAGACTCAGACTGACTATATTTAATACCTTTTGCAATTT  200

seq1  AGATCTTCTCATGTATTCTTAGAAAGAATATTAGACTTTTATGAAACTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTTCTCATGTATTCTTAGAAAGAATATTAGACTTTTATGAAACTTC  250

seq1  ACATTTTCTCTATTCTATTGTAGTCATTTGATATCAGACCAATTTTGAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTTCTCTATTCTATTGTAGTCATTTGATATCAGACCAATTTTGAGA  300

seq1  CACTTGATTGTTAAGAACTTTGTAGGAATGTATCACATAGTATTTCTTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGATTGTTAAGAACTTTGTAGGAATGTATCACATAGTATTTCTTAT  350

seq1  AATTCACAATGCTTCGGTGCCTATTTATATTTTTCATTTGCAAGTTGGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCACAATGCTTCGGTGCCTATTTATATTTTTCATTTGCAAGTTGGTT  400

seq1  TTCCATTCATTTGTAAAAAAGTTTTTCATATTCCTTTGTCAAGTAATGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATTCATTTGTAAAAAAGTTTTTCATATTCCTTTGTCAAGTAATGGA  450

seq1  TGTCAAAAGACTGACAGTTTTTCTGATGAAAATATGCTACTCAATCCCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAAAAGACTGACAGTTTTTCTGATGAAAATATGCTACTCAATCCCCA  500

seq1  AATAAGAGAGAAGGGAAATGGCAAAAGTGGTAACATAACAGTGAATATTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGAGAGAAGGGAAATGGCAAAAGTGGTAACATAACAGTGAATATTC  550

seq1  TAGACTAGGAAGGTTGCTCCATGGTAGGCATACTGTCACACTTGTCAAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACTAGGAAGGTTGCTCCATGGTAGGCATACTGTCACACTTGTCAAGG  600

seq1  GTCATGGAGTCAATTTCTCCAGCCTAATTCCCTTCCTAAAGGAAAGGAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATGGAGTCAATTTCTCCAGCCTAATTCCCTTCCTAAAGGAAAGGAAA  650

seq1  GAAAAATGGAAGGGATGAAGGAAGGAAACAAGAAAAAATAGAATCGAATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAATGGAAGGGATGAAGGAAGGAAACAAGAAAAAATAGAATCGAATA  700

seq1  AATTGGAAATTCTAGAGAAACTTTAAGAGCATTACTAGAGATTTCAGAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGGAAATTCTAGAGAAACTTTAAGAGCATTACTAGAGATTTCAGAAG  750

seq1  ATGGGATTAGGAAACTACTGAGGATAAAACAGTAACTTAGTGATAAAGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGATTAGGAAACTACTGAGGATAAAACAGTAACTTAGTGATAAAGCA  800

seq1  AGTATTTTATTACTATTATGTTAATAATTTTGGGGGTTGATCCTGTGTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTTTATTACTATTATGTTAATAATTTTGGGGGTTGATCCTGTGTTT  850

seq1  CACCATTAGCCTTTCTGACAGTTTGTGCTTAATGTCAGATGAGTATGTAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATTAGCCTTTCTGACAGTTTGTGCTTAATGTCAGATGAGTATGTAA  900

seq1  AGATATTTTCACCAATCAGGAGGAGAATTCTCCACTTGGAAGTCAAAGCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATTTTCACCAATCAGGAGGAGAATTCTCCACTTGGAAGTCAAAGCC  950

seq1  AGGGGAAAAAGTTCATTTCACCATTTCACTATATCTTTATCATTAATACA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGAAAAAGTTCATTTCACCATTTCACTATATCTTTATCATTAATACA  1000

seq1  GTTTCTAATGGTTTATGCTAATTGTTTTCTGACTTGTTATTTAATTGTTA  1050
      ||||||||||||||||||||  |||||||||||||||||||||| |||||
seq2  GTTTCTAATGGTTTATGCTA--TGTTTTCTGACTTGTTATTTAA-TGTTA  1047

seq1  TATTTATTAATTTATTAACAATTAATTAATAAGTATAACAATTAAATTGT  1100
      || ||||  ||||| |||| ||||  ||||||||||||||    ||||||
seq2  TA-TTAT--ATTTA-TAAC-ATTA--TAATAAGTATAACA---TAATTGT  1087

seq1  TATTTGCTATGGTATTGCAGGCTTGAAAAGCCAGGCATAAA-TTTCTTCA  1149
      |||||||||| | |||||| ||| |  |||||| ||||||| ||||||||
seq2  TATTTGCTAT-GAATTGCA-GCTGG--AAGCCA-GCATAAATTTTCTTCA  1132

seq1  CTGAAATATTACTTTAGGAATATCAATGGATTTGCTGTGTTAACATATTC  1199
      ||||||||     |||||||| || |||||  ||| ||||| ||||||||
seq2  CTGAAATA----CTTAGGAATTTC-ATGGA--TGC-GTGTTTACATATTC  1174

seq1  AGCCATGA  1207
      || |||||
seq2  AGGCATGA  1182


seq1: chr17_77330443_77331400
seq2: B6Ng01-324I17.g_67_1024 (reverse)

seq1  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATATGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATATGAG  50

seq1  TGTGTTTGTGAGTTGTGTGTGTGCGTGATTGTGCATAAAAGTGTGCGTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTTGTGAGTTGTGTGTGTGCGTGATTGTGCATAAAAGTGTGCGTGC  100

seq1  TTATGTGTGTTGTGTGTGTATGTGGTTTTTTGCATGTAATGCAAGAAGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTGTGTTGTGTGTGTATGTGGTTTTTTGCATGTAATGCAAGAAGGT  150

seq1  AAGTAGAAAGAGTCTCTTTATTTTGATGTAATCATTCTCTTCTCTTTTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAGAAAGAGTCTCTTTATTTTGATGTAATCATTCTCTTCTCTTTTGT  200

seq1  ATATGGTAAAGCAATAAATAATACAATAATCACAGAATGCTACAAGCATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGGTAAAGCAATAAATAATACAATAATCACAGAATGCTACAAGCATG  250

seq1  TGAGCATGTTCATGTTGGTTCTACTTTGGATGTGAAGAAAAGACAAATAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCATGTTCATGTTGGTTCTACTTTGGATGTGAAGAAAAGACAAATAC  300

seq1  ATCCAAAGGATTGGTTAATGACCATGTGCCAGCATCAATTATCTGATTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAAAGGATTGGTTAATGACCATGTGCCAGCATCAATTATCTGATTTT  350

seq1  AGAATGACAATATAAATAAGTTAATATTAATCTCCAACTTAGATGAGGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGACAATATAAATAAGTTAATATTAATCTCCAACTTAGATGAGGAG  400

seq1  TAATGAAAGTCTAGACTATTTTTCTACATAATTTAAAAACGTGTTTGCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGAAAGTCTAGACTATTTTTCTACATAATTTAAAAACGTGTTTGCAA  450

seq1  GAATGAAATGAATTTGAAATTCAGAACGTCATTTTGCTTATCAAATTGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAAATGAATTTGAAATTCAGAACGTCATTTTGCTTATCAAATTGTG  500

seq1  TATAATTCTGTATGCAGCAAAAAGACTCACTTTATCACATGTACATTATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATTCTGTATGCAGCAAAAAGACTCACTTTATCACATGTACATTATT  550

seq1  TTCATATTTAGAGAACAAGGATGGTCTAGTATATGAATGTTAGGAACATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATATTTAGAGAACAAGGATGGTCTAGTATATGAATGTTAGGAACATT  600

seq1  ATGAAAATTTCAAGACTATATTAGTATATAAACATTAAATTCACAGTAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAATTTCAAGACTATATTAGTATATAAACATTAAATTCACAGTAAA  650

seq1  GTCTAAATTAGTAGTAGTGCTTCCTTAATGGAGACAATTATATTTTAATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAAATTAGTAGTAGTGCTTCCTTAATGGAGACAATTATATTTTAATT  700

seq1  AAATAAGGTGATTAAAGAATCATTTGGAATAAAGCATTTTTAATAAGCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAGGTGATTAAAGAATCATTTGGAATAAAGCATTTTTAATAAGCCA  750

seq1  CTAGAATTTTGTTTCCAGACTGAATCATCCACTCAGCAGCACGATGACAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAATTTTGTTTCCAGACTGAATCATCCACTCAGCAGCACGATGACAT  800

seq1  AGACTGCTTTTAGTTGAAAGCACTCTAGTGTTTGACAACATAATACTGAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGCTTTTAGTTGAAAGCACTCTAGTGTTTGACAACATAATACTGAT  850

seq1  TGGCATGTCGCTTTCTTACTATTTTCTAAAGAAGAAATTTAAATAGCAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATGTCGCTTTCTTACTATTTTCTAAAGAAGAAATTTAAATAGCAAA  900

seq1  TGAAGAATTGTTTTTTAAACTATAATTGATAAGAATCAAAAATCATGAGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAATTGTTTTTTAAACTATAATTGATAAGAATCAAAAATCATGAGA  950

seq1  AAGAATTC  958
      ||||||||
seq2  AAGAATTC  958


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