BAC Information

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BAC

Clone NameB6Ng01-325F14
Chromosome17 (Build37)
Map Location 78,689,456 - 78,690,516
singlet/doubletsinglet
Overlap geneCrim1
Upstream geneLOC545234, LOC100043887, LOC668795, LOC383275
Downstream geneFez2, LOC100043888, Hdac1-ps, Vit, Strn, Heatr5b, 2310002B06Rik, EG625054, Eif2ak2, 2410078J06Rik, Cebpz, 2410091C18Rik, Prkcn, LOC675425, Qpct, LOC668812, LOC383277
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-325F14.bB6Ng01-325F14.g
ACCGA113429GA113430
length1,067127
definitionB6Ng01-325F14.b B6Ng01-325F14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttacaattattttgtttcagaaaacatcagagtttaatatagac
tctggctttttagccatgagttgattttctattttgggccaaaaattact
atgacagagggcaatggaataaatgctcttttctaaattgagaaagaagg
gcttcaaatatacttgcaaccattttttatttatttttttattttttttt
gcatgtgtttcaaaacaaaatgagatgctactgccatagggtgtcaaaga
gtcaggaatgctttaaatgcctatgttaatgtacagttttacatattgta
taatttatcatcaaaaatcatctggaggaattgtttaaattaaagggaac
aacacttcataccacaaagaagaatttttaaaaatgtctaacagactgat
ctttaaaaaaaaaaaaaaaaaaaagacccatctttgttgagatgggagaa
taggacagatggagaggatacttcactacaaggcacttaatttgataaag
gcttcttggaactgcatattcagggacaatttctactgctgagcttgagt
tggcatgagtaaagcaacttaattacccagcacaacttttaacagtcgta
gcatcgtgcccaacacatatggcccgataataatcaggggtacatacccc
tgtttcacagaggtgagagaaggggtctctgagttctgagcattaaaggg
gagcccctaactgccctccaggaaggtcagctttaatgtgtttgtcaggg
aagagtgggtgtgctctgttgatagtccctggtctgccacacccaccctg
aggtgctgttaaacacttcaaagacagaacaggtgggtctctagagatag
gagaggtgttgaggggctcagggaagctcagtcacctaccagaggatcca
caccactagcagagaggttgtaaagtgactgctgccactttcctcagagg
cccattttctccagatgtggctgagcagaggagtgagccaaatctactcg
gtttcagtagaaacgagcgtgaatattaaaatcagatactaagggcaaat
gggaggactaacagtag
gaattccaccaaactagcaaggaaaaaggaacactaatcctccacatttt
cagaatctgttagagagagaaagagagagagagagagagagagagagaga
gagagagagagagagagagagagagag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_78689456_78690516
seq2: B6Ng01-325F14.b_48_1114 (reverse)

seq1  CTACTGTTAGTCCTCCCATTTGCCC-TAGTTTCTGATTTTAATA-TCACG  48
      ||||||||||||||||||||||||| |||| ||||||||||||| |||||
seq2  CTACTGTTAGTCCTCCCATTTGCCCTTAGTATCTGATTTTAATATTCACG  50

seq1  CTTCGTTTCCTACTGAAAACGAAGTAGATTT-GCTCACTCCTCTGCTCAG  97
      | |||||| ||||||||| || ||||||||| ||||||||||||||||||
seq2  C-TCGTTT-CTACTGAAACCG-AGTAGATTTGGCTCACTCCTCTGCTCAG  97

seq1  CCACATCT-GAG-AAATGGG-CTCTGA-GAAAGT-GCAGCAGTCACTTAA  142
      |||||||| ||| ||||||| |||||| |||||| ||||||||||||| |
seq2  CCACATCTGGAGAAAATGGGCCTCTGAGGAAAGTGGCAGCAGTCACTTTA  147

seq1  CAACCTCTCTGCTAGT-GTGTGGATCCTCTGGTAGGTGACTGAGCTTCCC  191
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CAACCTCTCTGCTAGTGGTGTGGATCCTCTGGTAGGTGACTGAGCTTCCC  197

seq1  TGAGCCCCTCAACACCTCTCCTATCTCTAGAGACCCACCTGTTCTGTCTT  241
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCCCCTCAACACCTCTCCTATCTCTAGAGACCCACCTGTTCTGTCTT  247

seq1  TGAAGTGTTTAACAGCACCTCAGGGTGGGTGTGGCAGACCAGGGACTATC  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTGTTTAACAGCACCTCAGGGTGGGTGTGGCAGACCAGGGACTATC  297

seq1  AACAGAGCACACCCACTCTTCCCTGACAAACACATTAAAGCTGACCTTCC  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAGCACACCCACTCTTCCCTGACAAACACATTAAAGCTGACCTTCC  347

seq1  TGGAGGGCAGTTAGGGGCTCCCCTTTAATGCTCAGAACTCAGAGACCCCT  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGGCAGTTAGGGGCTCCCCTTTAATGCTCAGAACTCAGAGACCCCT  397

seq1  TCTCTCACCTCTGTGAAACAGGGGTATGTACCCCTGATTATTATCGGGCC  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCACCTCTGTGAAACAGGGGTATGTACCCCTGATTATTATCGGGCC  447

seq1  ATATGTGTTGGGCACGATGCTACGACTGTTAAAAGTTGTGCTGGGTAATT  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTGTTGGGCACGATGCTACGACTGTTAAAAGTTGTGCTGGGTAATT  497

seq1  AAGTTGCTTTACTCATGCCAACTCAAGCTCAGCAGTAGAAATTGTCCCTG  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGCTTTACTCATGCCAACTCAAGCTCAGCAGTAGAAATTGTCCCTG  547

seq1  AATATGCAGTTCCAAGAAGCCTTTATCAAATTAAGTGCCTTGTAGTGAAG  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGCAGTTCCAAGAAGCCTTTATCAAATTAAGTGCCTTGTAGTGAAG  597

seq1  TATCCTCTCCATCTGTCCTATTCTCCCATCTCAACAAAGATGGGTCTTTT  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTCTCCATCTGTCCTATTCTCCCATCTCAACAAAGATGGGTCTTTT  647

seq1  TTTTTTTTTTTTTTTTAAAGATCAGTCTGTTAGACATTTTTAAAAATTCT  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTTTTAAAGATCAGTCTGTTAGACATTTTTAAAAATTCT  697

seq1  TCTTTGTGGTATGAAGTGTTGTTCCCTTTAATTTAAACAATTCCTCCAGA  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGTGGTATGAAGTGTTGTTCCCTTTAATTTAAACAATTCCTCCAGA  747

seq1  TGATTTTTGATGATAAATTATACAATATGTAAAACTGTACATTAACATAG  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTTTGATGATAAATTATACAATATGTAAAACTGTACATTAACATAG  797

seq1  GCATTTAAAGCATTCCTGACTCTTTGACACCCTATGGCAGTAGCATCTCA  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTAAAGCATTCCTGACTCTTTGACACCCTATGGCAGTAGCATCTCA  847

seq1  TTTTGTTTTGAAACACATGCAAAAAAAAATAAAAAAATAAATAAAAAATG  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTTTGAAACACATGCAAAAAAAAATAAAAAAATAAATAAAAAATG  897

seq1  GTTGCAAGTATATTTGAAGCCCTTCTTTCTCAATTTAGAAAAGAGCATTT  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCAAGTATATTTGAAGCCCTTCTTTCTCAATTTAGAAAAGAGCATTT  947

seq1  ATTCCATTGCCCTCTGTCATAGTAATTTTTGGCCCAAAATAGAAAATCAA  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCATTGCCCTCTGTCATAGTAATTTTTGGCCCAAAATAGAAAATCAA  997

seq1  CTCATGGCTAAAAAGCCAGAGTCTATATTAAACTCTGATGTTTTCTGAAA  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGGCTAAAAAGCCAGAGTCTATATTAAACTCTGATGTTTTCTGAAA  1047

seq1  CAAAATAATTGTAAGAATTC  1061
      ||||||||||||||||||||
seq2  CAAAATAATTGTAAGAATTC  1067