BAC Information

Click to search

BAC

Clone NameB6Ng01-328I11
Chromosome17 (Build37)
Map Location 94,832,702 - 94,833,892
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC668885, LOC668886, Mettl4, 2700099C18Rik, LOC100043754, LOC668888, LOC100038868
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-328I11.bB6Ng01-328I11.g
ACCGA115769GA115770
length9981,187
definitionB6Ng01-328I11.b B6Ng01-328I11.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgagccccattttttaatggggttatttgatt
ttctggagtcaaccttcttgagttctttataaatattggatattactccc
ctatctgatttagaataggtaaagatcctttctgactctgttggtggcct
ttttgtcttattgactgtgtcttttcccttgcagaagctttgcaatttta
ggaggtcccatttgtcaattctcaatcttacagcacaaaccattgctgtt
ctattcaggaatatttcccctgtacccatatcttcgaggcttttctctac
tttctcctctataagtttcattgtctctggttatatgtggagttccttaa
tccacttagatttgaccttagtacaaggagataggaatggatcaattcgc
attcttctacatgataaccaccagttttgccagcaccatttgttgaagat
gctgtctcttttccactggatggtttttgcacccttgtcaaagatcaagt
gatcataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctatacaagtaccatgcagtttttattacaattgc
tctgtagtacagcttgaggtcagggatagtattccaccagaggttctttt
atccttgagaagagtttttgcttttctaggttttttgttattccagatga
atttgcagattgctctttctaattcgttgaagaattgagttggaattttg
atggggattgcattgaatctgtagatttcttttggcaagatagccatttt
tactatattgaccctgccaatccatgagcatgggagatctttccaccttc
tgagatcttctttaatttctttcttcagagacttgaagttttatcataca
gatctttcacttccttagttagtgtcccgccaggtatttatattatttgt
gactattgagaaggtgttgtttccctaatttcttttctcagcctgttt

gaattccctcagaagatcttgaccagtgtccaggcatagccacttatctc
ctctctgacattccatttgtgatgttaaaagtttccatctatgttataag
atccattagaagacaagtgtttaaaaagaatttctaagatgtatgtttta
ttttacaatcattaattcttaatcatgctgcccattttacagaggagaag
aaaagaattcctaaaagtgctacttgtgtgactgaagtgtgcttggcttg
tgccataaacacatccagggtgaaaagactgtcttctctgttctaggaga
caggacagcttgcttaggatcagggactttgtaaatctgtatgattgact
ttgaactttttatgttcaagcagtatcacttggtaatttatgtttttctt
gggatgtattcaagagatatgtcattcttctattccattcattctttctc
atgtgtgcagatccacaaaaagcttctcaaagctgtcttgaatcttgaag
gctgaatacattatggatcagggtatgagagtggtttcaagagaagtcac
tttctaaatcagagactcctgagagggtgtattgtgttcaagggactccc
acccatctatttttcatctgtgtgagagaggggccaggaagtagaatagg
atataggataggatgtgacattgagagaaaggtatgagctccatccagag
gagactcgtgagacacactgtgatatgaatatggatcctgttggggagag
ggaactatcatggatttcctctagttcttagggaaagtgtaattgcatat
cattcatttaaaaaggtattaccagaagatgtgtcagttaagtttcaatt
atcatttcttcccaaatgaatcagctaaacttaatctatttgttctgcaa
cttaaagatcttcatggtcatacccaatgtagtcctccagaccagtacct
actgtgtagaatggacttattattcaattcttctggtatcatagtctttt
ttttgtatcactcattgactttcatatttttcgtcatttgaactcacaat
ctggcaaaagtgattatttggtccaacaaagaagtcagaagttcattatt
taactgggcaatggtctgactttagaaatcacctagtagttggtatcagt
tatacactgcagctatgtattttagagctttgatatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_94832702_94833892
seq2: B6Ng01-328I11.g_68_1254 (reverse)

seq1  AATATCAAAGGCTCTTAAATATACTATAGCTTCCGTGTATAACTGAACCC  50
      ||||||||| ||||| |||||    |||||| | ||||||||||||  ||
seq2  AATATCAAA-GCTCTAAAATA---CATAGCTGCAGTGTATAACTGATACC  46

seq1  AACTACTCATGTTGATTTCTAATGTCCAGACCCATTG-CCAG-TAAATAA  98
      |||||||   | |||||||||| || |||| |||||| |||| |||||||
seq2  AACTACT--AGGTGATTTCTAAAGT-CAGA-CCATTGCCCAGTTAAATAA  92

seq1  TG-ACTTCTGACTTCTTTTGTTGGACCAAATTAATCCACTTTTG-CAGA-  145
      || |||||||||||| |||||||||||||| |||| |||||||| |||| 
seq2  TGAACTTCTGACTTC-TTTGTTGGACCAAA-TAAT-CACTTTTGCCAGAT  139

seq1  TGTGAGTTCAAATGACGAAAAATATGGAAGTCAATGAGTTGAT-TACAAA  194
      |||||||||||||||||||||||||| ||||||||||| ||||  | |||
seq2  TGTGAGTTCAAATGACGAAAAATATGAAAGTCAATGAG-TGATACAAAAA  188

seq1  ATAGACTATGATACCAG-AGAA-TGGATATTAAGTCCATTCTACACAGTA  242
      | ||||||||||||||| |||| || ||| ||||||||||||||||||||
seq2  AAAGACTATGATACCAGAAGAATTGAATAATAAGTCCATTCTACACAGTA  238

seq1  GGTACTGGTCTGGAGGACTACATTGGGTATGACCATGAAGATCTTTAAGT  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACTGGTCTGGAGGACTACATTGGGTATGACCATGAAGATCTTTAAGT  288

seq1  TGCAGAACAAATAGATTAAGTTTAGCTGATTCATTTGGGAAGAAATGATA  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAACAAATAGATTAAGTTTAGCTGATTCATTTGGGAAGAAATGATA  338

seq1  ATTGAAACTTAACTGACACATCTTCTGGTAATACCTTTTTAAATGAATGA  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAACTTAACTGACACATCTTCTGGTAATACCTTTTTAAATGAATGA  388

seq1  TATGCAATTACACTTTCCCTAAGAACTAGAGGAAATCCATGATAGTTCCC  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCAATTACACTTTCCCTAAGAACTAGAGGAAATCCATGATAGTTCCC  438

seq1  TCTCCCCAACAGGATCCATATTCATATCACAGTGTGTCTCACGAGTCTCC  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCCAACAGGATCCATATTCATATCACAGTGTGTCTCACGAGTCTCC  488

seq1  TCTGGATGGAGCTCATACCTTTCTCTCAATGTCACATCCTATCCTATATC  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGATGGAGCTCATACCTTTCTCTCAATGTCACATCCTATCCTATATC  538

seq1  CTATTCTACTTCCTGGCCCCTCTCTCACACAGATGAAAAATAGATGGGTG  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTCTACTTCCTGGCCCCTCTCTCACACAGATGAAAAATAGATGGGTG  588

seq1  GGAGTCCCTTGAACACAATACACCCTCTCAGGAGTCTCTGATTTAGAAAG  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTCCCTTGAACACAATACACCCTCTCAGGAGTCTCTGATTTAGAAAG  638

seq1  TGACTTCTCTTGAAACCACTCTCATACCCTGATCCATAATGTATTCAGCC  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTCTCTTGAAACCACTCTCATACCCTGATCCATAATGTATTCAGCC  688

seq1  TTCAAGATTCAAGACAGCTTTGAGAAGCTTTTTGTGGATCTGCACACATG  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGATTCAAGACAGCTTTGAGAAGCTTTTTGTGGATCTGCACACATG  738

seq1  AGAAAGAATGAATGGAATAGAAGAATGACATATCTCTTGAATACATCCCA  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGAATGAATGGAATAGAAGAATGACATATCTCTTGAATACATCCCA  788

seq1  AGAAAAACATAAATTACCAAGTGATACTGCTTGAACATAAAAAGTTCAAA  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAACATAAATTACCAAGTGATACTGCTTGAACATAAAAAGTTCAAA  838

seq1  GTCAATCATACAGATTTACAAAGTCCCTGATCCTAAGCAAGCTGTCCTGT  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAATCATACAGATTTACAAAGTCCCTGATCCTAAGCAAGCTGTCCTGT  888

seq1  CTCCTAGAACAGAGAAGACAGTCTTTTCACCCTGGATGTGTTTATGGCAC  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTAGAACAGAGAAGACAGTCTTTTCACCCTGGATGTGTTTATGGCAC  938

seq1  AAGCCAAGCACACTTCAGTCACACAAGTAGCACTTTTAGGAATTCTTTTC  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCAAGCACACTTCAGTCACACAAGTAGCACTTTTAGGAATTCTTTTC  988

seq1  TTCTCCTCTGTAAAATGGGCAGCATGATTAAGAATTAATGATTGTAAAAT  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCTCTGTAAAATGGGCAGCATGATTAAGAATTAATGATTGTAAAAT  1038

seq1  AAAACATACATCTTAGAAATTCTTTTTAAACACTTGTCTTCTAATGGATC  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACATACATCTTAGAAATTCTTTTTAAACACTTGTCTTCTAATGGATC  1088

seq1  TTATAACATAGATGGAAACTTTTAACATCACAAATGGAATGTCAGAGAGG  1142
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAACATAGATGGAAACTTTTAACATCACAAATGGAATGTCAGAGAGG  1138

seq1  AGATAAGTGGCTATGCCTGGACACTGGTCAAGATCTTCTGAGGGAATTC  1191
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAAGTGGCTATGCCTGGACACTGGTCAAGATCTTCTGAGGGAATTC  1187


| Home | SequenceCutter | Blast | Download |