BAC Information

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BAC

Clone NameB6Ng01-329I12
Chromosome17 (Build37)
Map Location 70,729,545 - 70,730,238
singlet/doubletsinglet
Overlap genenone
Upstream geneZfp161, C030034I22Rik, A930029G22Rik, A330050F15Rik, LOC100043623, LOC668720, LOC673535, LOC100043630
Downstream geneLOC623112, LOC623143, Dlgap1, Tgif1, LOC668724, LOC546695, LOC240156, Mylc2b, 2900073G15Rik, Myom1, Lpin2, Emilin2, LOC100043644, Smchd1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-329I12.bB6Ng01-329I12.g
ACCGA116469GA116470
length1,133698
definitionB6Ng01-329I12.b B6Ng01-329I12.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaataccgattggctgagaagcaccttaaaaatgt
tcagcatccttaatcatcagggaaatgcaaatcaaaagcactctgatatt
ccacctcacaccagtcagaatggctaacataaaaaattcagttgactaca
gatgctggcgaggatgtagagaaagaggaacactcctccattgctggtgg
aattgcaagcttgtacaaccactctggaattcagtctggtggttccttag
aaaattggccataatactaccagaagatccaacaatacctctcctgggca
tatacccagaagatgtttgaactggtaataagaacacatgctccactatg
ttcatatagccttaattataatagccagaagctggaaagaacccagatgt
ccctcaacagaggaatggatacagaaaatatgttacatttacacaatgga
gtactactcagctattaaaaacaataaatttatgaaattcttggacaaat
gtatgtatctggaggatatcatccttagtgaggtaacccaatcacaaaag
aagtcattagatatgcactacaatttgtaaaacacaagaaaatcaagaag
agggaagaccaacatgtggatacttcattcttccttagaatagggaacaa
aatacccatgaaaggagttacagagacaaagtttggagctaagacggaag
gatggactatccagagattaccccacccagggatccatcccataatcagc
cacaaaaccgagacactattgcatatgcccgcaagattttgctgaaggga
ccatggtgtagctgtctcgtatgaggctatgccagtgcctggcaaataca
gaagtggatgctcacagtcatctataagatagaacacagggcccccaatg
gaagaagctagagaaagcacccaaaggagctgaaaggggtctgcaaccct
ataggtggcacaacaatattaactaaaccagtacctccagagctcgtgtc
tctagctgcatatgtacagaagattggcctagtcggcatcattggggaag
agagcctaggtctgcaactttatatgcttcggtacaggggaattgtccta
ggcccaagaatgtcgtaagttggtgtgataagg
gaattccatattttagagtaactttagagtgtcttaactatgttaaagca
agggcattttatgtacttaataattaactttgtggctttttatttgtggg
gtgtgtgtatctgtatgtgtgtgtttatgtacatatgtgtatgtgtgtgt
acagtgtggctcagtagtcaagtgctatgtcaaatccattacaacatttc
tacttcaattacattttaattatatttactcaaggaaaattaacatatat
ttgaggcttggctttgaatgaataagaaaaaaaatctcactatttatgtt
gaagtggatgaaactttatgacttcaccaagcttttagtatttattctga
ggtattgatttatgggtattgggaacaggacattgattgcagttgttgtt
gttgggaaactacctagtgcttgttaaataagaccccaaataccagggat
tcagaatagtcacaagctgtaaccagggaagctgatgaggaacaatggtt
tctgggtcatagtagagcacaggctgataggttttgatcagaatgagttt
ttcccaggtgtctgaagcccccatagtgaggaacatcatgagaaagagag
cctgtctgcacactggccactcatgtttcttctcagcaaaggccagatgc
tttgagtcatatgttcctggaccacagaatatttccattagctaaatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_70729545_70730238
seq2: B6Ng01-329I12.g_66_763 (reverse)

seq1  AATTTAGCTAATGG-ATTATTCTGTTGGTCCAGGAACATATGACTCAAAG  49
      |||||||||||||| | ||||||| |||||||||||||||||||||||||
seq2  AATTTAGCTAATGGAAATATTCTG-TGGTCCAGGAACATATGACTCAAAG  49

seq1  CATCTGGCCTTTGCTGAGAAGAAACATGAGTGGCCAGTGTGCAGACAGGC  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGGCCTTTGCTGAGAAGAAACATGAGTGGCCAGTGTGCAGACAGGC  99

seq1  TCTC-TTCTCCTGATGTTCCTC-CTAT-GGGGCTTCAGACACCTGGG-AA  145
      |||| ||||| ||||||||||| |||| ||||||||||||||||||| ||
seq2  TCTCTTTCTCATGATGTTCCTCACTATGGGGGCTTCAGACACCTGGGAAA  149

seq1  AACTCATTCTGATCAAAACCTATCAGCCTGTGCTCTACTATGACCCAGAA  195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCATTCTGATCAAAACCTATCAGCCTGTGCTCTACTATGACCCAGAA  199

seq1  ACCATTGTTCCTCATCAGCTTCCCTGGTTACAGCTTGTGACTATTCTGAA  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTGTTCCTCATCAGCTTCCCTGGTTACAGCTTGTGACTATTCTGAA  249

seq1  TCCCTGGTATTTGGGGTCTTATTTAACAAGCACTAGGTAGTTTCCCAACA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGGTATTTGGGGTCTTATTTAACAAGCACTAGGTAGTTTCCCAACA  299

seq1  ACAACAACTGCAATCAATGTCCTGTTCCCAATACCCATAAATCAATACCT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACAACTGCAATCAATGTCCTGTTCCCAATACCCATAAATCAATACCT  349

seq1  CAGAATAAATACTAAAAGCTTGGTGAAGTCATAAAGTTTCATCCACTTCA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATAAATACTAAAAGCTTGGTGAAGTCATAAAGTTTCATCCACTTCA  399

seq1  ACATAAATAGTGAGATTTTTTTTCTTATTCATTCAAAGCCAAGCCTCAAA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAATAGTGAGATTTTTTTTCTTATTCATTCAAAGCCAAGCCTCAAA  449

seq1  TATATGTTAATTTTCCTTGAGTAAATATAATTAAAATGTAATTGAAGTAG  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGTTAATTTTCCTTGAGTAAATATAATTAAAATGTAATTGAAGTAG  499

seq1  AAATGTTGTAATGGATTTGACATAGCACTTGACTACTGAGCCACACTGTA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTTGTAATGGATTTGACATAGCACTTGACTACTGAGCCACACTGTA  549

seq1  CACACACATACACATATGTACATAAACACACACATACAGATACACACACC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACATACACATATGTACATAAACACACACATACAGATACACACACC  599

seq1  CCACAAATAAAAAGCCACAAAGTTAATTATTAAGTACATAAAATGCCCTT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAAATAAAAAGCCACAAAGTTAATTATTAAGTACATAAAATGCCCTT  649

seq1  GCTTTAACATAGTTAAGACACTCTAAAGTTACTCTAAAATATGGAATTC  694
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTAACATAGTTAAGACACTCTAAAGTTACTCTAAAATATGGAATTC  698