BAC Information

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BAC

Clone NameB6Ng01-330H18
Chromosome17 (Build37)
Map Location 72,272,907 - 72,273,984
singlet/doubletsinglet
Overlap geneAlk
Upstream geneLOC546695, LOC240156, Mylc2b, 2900073G15Rik, Myom1, Lpin2, Emilin2, LOC100043644, Smchd1, LOC100043879, Ndc80, LOC668740, Spdya, LOC623451, Wdr43, 4632412N22Rik, BC027072, Clip4
Downstream geneYpel5, Lbh
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-330H18.bB6Ng01-330H18.g
ACCGA117133GA117134
length1,1691,092
definitionB6Ng01-330H18.b B6Ng01-330H18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgttttttccaaaacttttatcatgaaggggtgttggattttg
tcaaatgctttctcagtatctaaagagatgatcatgtggtttttgtcttt
gagtttgtttatatagtggtctacattgatgaatttctgtattaaaccat
ccctgcatccctgggatgaagcctacttggtcatgatggatgtatcattt
tgatgtgttcttggattcagtttgcgaggattttattgagtatttttgca
tagatattcataagggaaattggtctgaagttctctttctttgttggatc
tttgtgtggtttaggtatcagagtaattgtggcttcatagaatgaattgg
gtagagtaccttctgtttctattttgtggaatagtttgaggagagttaga
attaggtcttctttgaaggtctgatagaactcttcactaaactcatctgg
tcctgaactttttattggttgggagactattgatgactgcttctatttct
ttaggggaaatggaactgtttagatcgttaatctgatcctgatttaactt
tggtacctggtatccgtctaggaagttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagtaggatctgatgatgttttggatt
tcctcaggtcctgttgttatgtctcccttttcatttctgattttgttaat
tagaatgctgtccctgggccctctagttagtctggctaagggtttatcta
tcttgttgattttctcaaagaaccagctcctggtttggttgattctttga
atagttctttttgtttccactgggttgatttcagccctgagtttgattat
ttccctgccatttactcctcttgggtgaatttgcttcccttagttctaga
gcgtctaggtgagctgtcaggctgctagtgtaagctctctccagcttctt
ttttggaggcactcggggctatgagttttcctcttaggactgccttcatt
gtgtcccataagtttgggtttgtggtgccttcattttcattaaactctaa
aaagtcttaatttctttctttattcatccttgaccaagaaatacatttga
agtagaggtgtgttcagtttccaccatgtaaatgttggcctttctactat
tcaattctgtatctgaagc
gaattctcagccagtcttgatttacttttgtgatgggagccaggccttaa
ggtctgatgggattccggcacatacacatctaaatggaaagaaaggttga
cttccaggtggattctcaatgtcacttcaaggtttaggaagtaaggtgca
tattgactgatggctagctttctgatcaaatctattaattcaaaggacta
acactttatggaaggttctgtttgtttgtttgcttgtctttctgagacag
ggtcttgttgataactcaaactggcacacaaaaaagcaattgttctgccc
agtgctaagagaataagcctgcttcaccatggcctacttacaaaaggtat
ttttgcagaatttgtttggccagttgtccctttacctgttccaaagccag
aattacacatttgggggagtgtgggggaaagactaaagatggctttggca
tcttcaagacacctggctttgggggaatcttcattgaccatggaaagcca
gaagagctggaggcccattctgtagacagcctgtatccacagcaaacaaa
agccctccccctggcagcaggacataacatctgcaccttgcttgagcatc
taaccttgatgctaaaacccttttaatttcagcctttgttagctacagga
ttgaacagttctgggatagtcccagagaagttggccatctacttctttgc
cagctggaatgtctgatgaggtagaaagaggtctataggctctagatttc
aggtgggccacagttcctcatttctgaactttgttcccgactagttgtaa
gacccgagttagatcaaagcaacttagtgaggaccaagaccccatatgag
atcacgtagctgacttatgtgggttcatagtaagtctatggcggtacagt
gaccaaacattcatttcaaagtcaaatacattaccaagtcttgagattat
ttctggcactgcttactagtgtgtgcattcctgacttcttctctaagttt
tattttacacacacaacactcacacacacatcacttctcacaattgtcaa
ttcagcgctgcactcacagctcactctcggacttattgtctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_72272907_72273984
seq2: B6Ng01-330H18.g_69_1160

seq1  GAATTCTCAGCCAGTCTTGATTTACTTTTGTGATGGGAGCCAGGCCTTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGCCAGTCTTGATTTACTTTTGTGATGGGAGCCAGGCCTTAA  50

seq1  GGTCTGATGGGATTCCGGCACATACACATCTAAATGGAAAGAAAGGTTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTGATGGGATTCCGGCACATACACATCTAAATGGAAAGAAAGGTTGA  100

seq1  CTTCCAGGTGGATTCTCAATGTCACTTCAAGGTTTAGGAAGTAAGGTGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCAGGTGGATTCTCAATGTCACTTCAAGGTTTAGGAAGTAAGGTGCA  150

seq1  TATTGACTGATGGCTAGCTTTCTGATCAAATCTATTAATTCAAAGGACTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGACTGATGGCTAGCTTTCTGATCAAATCTATTAATTCAAAGGACTA  200

seq1  ACACTTTATGGAAGGTTCTGTTTGTTTGTTTGCTTGTCTTTCTGAGACAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTTATGGAAGGTTCTGTTTGTTTGTTTGCTTGTCTTTCTGAGACAG  250

seq1  GGTCTTGTTGATAACTCAAACTGGCACACAAAAAAGCAATTGTTCTGCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTTGTTGATAACTCAAACTGGCACACAAAAAAGCAATTGTTCTGCCC  300

seq1  AGTGCTAAGAGAATAAGCCTGCTTCACCATGGCCTACTTACAAAAGGTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTAAGAGAATAAGCCTGCTTCACCATGGCCTACTTACAAAAGGTAT  350

seq1  TTTTGCAGAATTTGTTTGGCCAGTTGTCCCTTTACCTGTTCCAAAGCCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCAGAATTTGTTTGGCCAGTTGTCCCTTTACCTGTTCCAAAGCCAG  400

seq1  AATTACACATTTGGGGGAGTGTGGGGGAAAGACTAAAGATGGCTTTGGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACACATTTGGGGGAGTGTGGGGGAAAGACTAAAGATGGCTTTGGCA  450

seq1  TCTTCAAGACACCTGGCTTTGGGGGAATCTTCATTGACCATGGAAAGCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCAAGACACCTGGCTTTGGGGGAATCTTCATTGACCATGGAAAGCCA  500

seq1  GAAGAGCTGGAGGCCCATTCTGTAGACAGCCTGTATCCACAGCAAACAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGCTGGAGGCCCATTCTGTAGACAGCCTGTATCCACAGCAAACAAA  550

seq1  AGCCCTCCCCCTGGCAGCAGGACATAACATCTGCACCTTGCTTGAGCATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCTCCCCCTGGCAGCAGGACATAACATCTGCACCTTGCTTGAGCATC  600

seq1  TAACCTTGATGCTAAAACCCTTTTAATTTCAGCCTTTGTTAGCTACAGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCTTGATGCTAAAACCCTTTTAATTTCAGCCTTTGTTAGCTACAGGA  650

seq1  TTGAACAGTTCTGGGATAGTCCCAGAGAAGTTGGCCATCTACTTCTTTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAACAGTTCTGGGATAGTCCCAGAGAAGTTGGCCATCTACTTCTTTGC  700

seq1  CAGCTGGAATGTCTGATGAGGTAGAAAGAGGTCTATAGGCTCTAGA-TTC  749
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CAGCTGGAATGTCTGATGAGGTAGAAAGAGGTCTATAGGCTCTAGATTTC  750

seq1  AGGTGGGCCACAGTTCCTCA-TTCTGAACTTTGTTCCCGACTAGTTGTAA  798
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  AGGTGGGCCACAGTTCCTCATTTCTGAACTTTGTTCCCGACTAGTTGTAA  800

seq1  GACCCGAGTTAGATCAAAGCAACTTAGGTGAGGACCAAGACCCCATATGA  848
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GACCCGAGTTAGATCAAAGCAACTTA-GTGAGGACCAAGACCCCATATGA  849

seq1  GATCACGTAGCTGAC-TATGTGGG-TCATAGTAAGTCTATGGCGGTACAG  896
      ||||||||||||||| |||||||| |||||||||||||||||||||||||
seq2  GATCACGTAGCTGACTTATGTGGGTTCATAGTAAGTCTATGGCGGTACAG  899

seq1  TGACCAAACATTCA-TTCAAAGTCAAATACA-TACCAAGTC-TGAGA-TA  942
      |||||||||||||| |||||||||||||||| ||||||||| ||||| ||
seq2  TGACCAAACATTCATTTCAAAGTCAAATACATTACCAAGTCTTGAGATTA  949

seq1  TTTCTGGCACTGCTTACTAGTG-GTGCA-TCCTGACTTC-TCTCTAGTCT  989
      |||||||||||||||||||||| ||||| |||||||||| ||||||   |
seq2  TTTCTGGCACTGCTTACTAGTGTGTGCATTCCTGACTTCTTCTCTAAGTT  999

seq1  TAATTTTACACACAC-ACACTCACACACACA-CACTCCCCACAA-TGCCA  1036
      | ||||||||||||| ||||||||||||||| |||| | ||||| || ||
seq2  TTATTTTACACACACAACACTCACACACACATCACTTCTCACAATTGTCA  1049

seq1  A-TCAGCGCTGCACTCACAGCTCACTCTCGGGACTATTGTCTG  1078
      | |||||||||||||||||||||||||||||   |||||||||
seq2  ATTCAGCGCTGCACTCACAGCTCACTCTCGGACTTATTGTCTG  1092