BAC Information

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BAC

Clone NameB6Ng01-330O11
Chromosome17 (Build37)
Map Location 32,753,093 - 32,753,716
singlet/doubletsinglet
Overlap genenone
Upstream geneCbs, LOC623242, U2af1, Cryaa, Snf1lk, Hsf2bp, Rrp1b, LOC435518, Notch3, Pdxk-ps, Abhd9, Brd4, LOC100043434, LOC100043433, Akap8, Akap8l, Wiz, A430107D22Rik, Pglyrp2, 4732474A20Rik, EG208285, Cyp4f16, LOC667178
Downstream geneLOC677156, EG631304, Cyp4f15, LOC623809, 9030612M13Rik, Zfp811, 6030490I01Rik, LOC631266, BC066107, Cyp4f14, Cyp4f13, 6030422M01Rik, Zfp472, C920016K16Rik, 1700065O13Rik, 4921501E09Rik, Zfp563, Morc2b, LOC100038859, LOC100038860, LOC100043474, Zfp422-rs1, Olfr63, LOC100043468, Zfp81, Zfp101, 1700029I08Rik, LOC100042953, Adamts10, Myo1f
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-330O11.bB6Ng01-330O11.g
ACCGA117421GA117422
length6241,112
definitionB6Ng01-330O11.b B6Ng01-330O11.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaaatatagtcaaatatagtcagtcaagttgacaaccaggaata
gccagtacagagaggtactatgtacatgagccaagatgttgctgcattag
tgaagtggatggtccaaatcagggtcagggagaagagtcccaggattcaa
ggagacaggtggctgtaaggtaactcagccagggataattagtaaggtct
gatattgagtcatgccggcattactgagccaccaatcaggcagctgtttg
agtactccttcaattgtatcggggttagttatggctaaaatttggcccaa
agttaatttatctgtatctttaaccagtaatgttgtaggtgcaatgatac
acaggcaaggtagccatcctgatgtcactgggtctactttcttggacaaa
aaaatccattggcagtttccatggccctagagtttgggttaagactcctt
tggctattcctttatgttcatcaacatatagatggaatggcttagcccca
aagcaggggctgatagcaaggtgtgttctatttttttaaagaccctttgg
tgttcctgagtctaaacaaaatccttggcttcatatcaaggtttagctat
ttcagcaaaccccacaatctataa
gaattccataaaatttcatgtaggatccatcaaatcaaaggtcaatatga
gctgttatgtctaaagatcttgagtcagagctgaccactgggcagccctt
cctgaacatatgaactcaccgtgatttttgtggctgacactgaagaatgt
tactaatcagccaaagagttgtgattataatactcatgctctgttatcta
aatgttctgaagttcccctgttgagcacacatctaccacccaacttactt
tactcaggaccaatcagcttaaaggaccaagcagctgacaatactttgcc
tagtaagccaacagctgccctccttgcactttaaacttttgaaactgttt
ttttttgtttgtttttttgttttttgtttttttataaaaagcctacctga
gagcagatgtagtgggtattctggttgtcaacttgactctatctggaatg
aactacaatccagaattggaggctcacctgtgatccgaatctggagtcta
ggagatacaagtttctgacctggatcttggcgtggagagcttgagtcata
gtggctatgaattccagaagattaagacagggagatctccgagttcaaga
tcatctgggattaaaggcgtggtggtacacacctttaatctgggccacac
cttctgctggagacctacataaggacattggaagaaggaagattcactct
cttcttcacctgcttgccttgtgggactgagcaactgctagatccttaaa
cttccattcacagctgctactgaccattgttgggagttggactacaaact
gtaagtcatcaacaaattcccttactatatagagactacctgtaagctct
gtgactctagagaaccctgattaatacagaagtctagaactgcatttggg
gtcctcagtctttttttgtggtcctggacacccagttattaagtagtatt
aaggtatgtgttcataatctattttttcctattgaaatcagtattagttt
gggtttgagtggcaattccagaccccacaaacacttaacaaatgtcaaga
acccctgaaagtgcaggatttggcatgttatatagttagtaggaatgctg
gatgagactacg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_32753093_32753716
seq2: B6Ng01-330O11.b_49_672

seq1  GAATTCCAAATATAGTCAAATATAGTCAGTCAAGTTGACAACCAGGAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAATATAGTCAAATATAGTCAGTCAAGTTGACAACCAGGAATA  50

seq1  GCCAGTACAGAGAGGTACTATGTACATGAGCCAAGATGTTGCTGCATTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGTACAGAGAGGTACTATGTACATGAGCCAAGATGTTGCTGCATTAG  100

seq1  TGAAGTGGATGGTCCAAATCAGGGTCAGGGAGAAGAGTCCCAGGATTCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTGGATGGTCCAAATCAGGGTCAGGGAGAAGAGTCCCAGGATTCAA  150

seq1  GGAGACAGGTGGCTGTAAGGTAACTCAGCCAGGGATAATTAGTAAGGTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGACAGGTGGCTGTAAGGTAACTCAGCCAGGGATAATTAGTAAGGTCT  200

seq1  GATATTGAGTCATGCCGGCATTACTGAGCCACCAATCAGGCAGCTGTTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTGAGTCATGCCGGCATTACTGAGCCACCAATCAGGCAGCTGTTTG  250

seq1  AGTACTCCTTCAATTGTATCGGGGTTAGTTATGGCTAAAATTTGGCCCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACTCCTTCAATTGTATCGGGGTTAGTTATGGCTAAAATTTGGCCCAA  300

seq1  AGTTAATTTATCTGTATCTTTAACCAGTAATGTTGTAGGTGCAATGATAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAATTTATCTGTATCTTTAACCAGTAATGTTGTAGGTGCAATGATAC  350

seq1  ACAGGCAAGGTAGCCATCCTGATGTCACTGGGTCTACTTTCTTGGACAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGCAAGGTAGCCATCCTGATGTCACTGGGTCTACTTTCTTGGACAAA  400

seq1  AAAATCCATTGGCAGTTTCCATGGCCCTAGAGTTTGGGTTAAGACTCCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCCATTGGCAGTTTCCATGGCCCTAGAGTTTGGGTTAAGACTCCTT  450

seq1  TGGCTATTCCTTTATGTTCATCAACATATAGATGGAATGGCTTAGCCCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTATTCCTTTATGTTCATCAACATATAGATGGAATGGCTTAGCCCCA  500

seq1  AAGCAGGGGCTGATAGCAAGGTGTGTTCTATTTTTTTAAAGACCCTTTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGGGGCTGATAGCAAGGTGTGTTCTATTTTTTTAAAGACCCTTTGG  550

seq1  TGTTCCTGAGTCTAAACAAAATCCTTGGCTTCATATCAAGGTTTAGCTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCTGAGTCTAAACAAAATCCTTGGCTTCATATCAAGGTTTAGCTAT  600

seq1  TTCAGCAAACCCCACAATCTATAA  624
      ||||||||||||||||||||||||
seq2  TTCAGCAAACCCCACAATCTATAA  624