MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-331H15
Chromosome	17 (Build37)
Map Location	73,785,502 - 73,923,764
singlet/doublet	doublet
Overlap gene	LOC100043666, Galnt14
Upstream gene	Alk, Ypel5, Lbh, Lycat, LOC668709, Capn13
Downstream gene	Ehd3, LOC240160, Xdh, Srd5a2, Memo1, EG668716, 2810410M20Rik, LOC668773, LOC668775, Spast, Slc30a6, Nlrc4, LOC100043883, LOC624159, Yipf4
Link	Open Mouse BAC browser

Click to get alignment info.

name	Alk (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11682 MGI:103305
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ypel5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:383295 MGI:1916937
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lbh (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77889 MGI:1925139
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lycat (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:225010 MGI:2684937
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668709 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668709
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Capn13 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:381122 MGI:2685789
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043666 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043666
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	Galnt14 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71685 MGI:1918935
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ehd3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:57440 MGI:1928900
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC240160 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:240160
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 8 Proteins pseudo : _no_value

name	Xdh (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22436 MGI:98973
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Srd5a2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:94224 MGI:2150380
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Memo1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76890 MGI:1924140
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG668716 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668716 MGI:3647780
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 29 ESTs, 4 Proteins pseudo : _no_value

name	2810410M20Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66310 MGI:1913560
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668773 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668773
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 307 ESTs, 4 Proteins pseudo : _no_value

name	LOC668775 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668775
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	Spast (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:50850 MGI:1858896
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc30a6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:210148 MGI:2386741
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nlrc4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:268973 MGI:3036243
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043883 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043883
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 125 ESTs, 5 Proteins pseudo : _no_value

name	LOC624159 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:624159
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 14 mRNAs, 1060 ESTs, 6 Proteins pseudo : _no_value

name	Yipf4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67864 MGI:1915114
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Alk (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110347474 GeneID:11682 MGI:103305
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : anaplastic lymphoma kinase transcript_id : NM_007439.2

name	Ypel5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142349613 GeneID:383295 MGI:1916937
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : yippee-like 5 (Drosophila) transcript_id : NM_027166.4

name	Lbh (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34328473 GeneID:77889 MGI:1925139
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : limb-bud and heart transcript_id : NM_029999.3

name	Lycat (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486721 GeneID:225010 MGI:2684937
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : lysocardiolipin acyltransferase transcript_id : NM_001081071.1

name	Capn13 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802275 GeneID:381122 MGI:2685789
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : calpain 13 transcript_id : NM_001033444.2

name	LOC100043666 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268806 GeneID:100043666
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : similar to Ubtf protein transcript_id : XM_001480646.1

name	Galnt14 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:58000404 GeneID:71685 MGI:1918935
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 transcript_id : NM_027864.1

name	Ehd3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802831 GeneID:57440 MGI:1928900
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : EH-domain containing 3 transcript_id : NM_020578.2

name	Xdh (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:77682554 GeneID:22436 MGI:98973
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : xanthine dehydrogenase transcript_id : NM_011723.2

name	Srd5a2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131162 GeneID:94224 MGI:2150380
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : steroid 5 alpha-reductase 2 transcript_id : NM_053188.2

name	Memo1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:19526993 GeneID:76890 MGI:1924140
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mediator of cell motility 1 transcript_id : NM_133771.1

name	2810410M20Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142348817 GeneID:66310 MGI:1913560
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2810410M20 gene transcript_id : NM_024428.3

name	Spast (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:39930368 GeneID:50850 MGI:1858896
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : spastin transcript_id : NM_016962.1

name	Slc30a6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142365275 GeneID:210148 MGI:2386741
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 30 (zinc transporter), member 6 transcript_id : NM_144798.3

name	Nlrc4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802564 GeneID:268973 MGI:3036243
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : NLR family, CARD domain containing 4 transcript_id : NM_001033367.2

name	Yipf4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803036 GeneID:67864 MGI:1915114
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Yip1 domain family, member 4 transcript_id : NM_026417.3

name	Alk (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110347475 GeneID:11682 MGI:103305
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004713 - protein-tyrosine kinase activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0004714 - transmembrane receptor protein tyrosine kinase activity [Evidence ISS] [Evidence IEA] GO_process : GO:0006468 - protein amino acid phosphorylation [Evidence IEA]; GO:0007169 - transmembrane receptor protein tyrosine kinase signaling pathway [Evidence IEA] codon_start : 1 product : anaplastic lymphoma kinase protein_id : NP_031465.2

name	Ypel5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:47059139 CCDS:CCDS28963.1 GeneID:383295 MGI:1916937
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : yippee-like 5 product : yippee protein homolog protein_id : NP_081442.1

name	Lbh (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34328474 CCDS:CCDS28964.1 GeneID:77889 MGI:1925139
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0016563 - transcriptional activator activity [Evidence IDA] GO_process : GO:0006357 - regulation of transcription from RNA polymerase II promoter [Evidence IDA] codon_start : 1 product : limb-bud and heart protein_id : NP_084275.3

name	Lycat (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486722 GeneID:225010 MGI:2684937
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IDA] GO_function : GO:0008415 - acyltransferase activity [Evidence IDA] [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0008152 - metabolism [Evidence IEA] codon_start : 1 note : acyl-CoA:lysocardiolipin acyltransferase 1 product : lysocardiolipin acyltransferase protein_id : NP_001074540.1

name	Capn13 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701961 GeneID:381122 MGI:2685789
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0004198 - calpain activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA] GO_process : GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 product : calpain 13 protein_id : NP_001028616.1

name	LOC100043666 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268807 GeneID:100043666
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480696.1

name	Galnt14 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58000405 CCDS:CCDS28965.1 GeneID:71685 MGI:1918935
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0030145 - manganese ion binding [Evidence IEA]; GO:0004653 - polypeptide N-acetylgalactosaminyltransferase activity [Evidence IEA]; GO:0005529 - sugar binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 exception : mismatches in translation product : UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 protein_id : NP_082140.1

name	Ehd3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:10181214 CCDS:CCDS28966.1 GeneID:57440 MGI:1928900
definition	GO_component : GO:0030139 - endocytic vesicle [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] codon_start : 1 exception : mismatches in translation note : EH-domain containing protein 2 product : EH-domain containing 3 protein_id : NP_065603.1

name	Xdh (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:77682555 CCDS:CCDS28967.1 GeneID:22436 MGI:98973
definition	GO_component : GO:0005777 - peroxisome [Evidence IEA] GO_function : GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0009055 - electron carrier activity [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0030151 - molybdenum ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0004854 - xanthine dehydrogenase activity [Evidence IDA]; GO:0004855 - xanthine oxidase activity [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA]; GO:0007595 - lactation [Evidence IMP]; GO:0030856 - regulation of epithelial cell differentiation [Evidence IMP] codon_start : 1 note : xanthine oxidase product : xanthine dehydrogenase protein_id : NP_035853.2

name	Srd5a2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:16716485 CCDS:CCDS28968.1 GeneID:94224 MGI:2150380
definition	EC_number : 1.3.99.5 GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0005792 - microsome [Evidence IEA] GO_function : GO:0003865 - 3-oxo-5-alpha-steroid 4-dehydrogenase activity [Evidence IMP]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0006702 - androgen biosynthesis [Evidence IMP]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0030539 - male genitalia development [Evidence IMP]; GO:0007548 - sex differentiation [Evidence IEA]; GO:0006694 - steroid biosynthesis [Evidence IMP] codon_start : 1 note : steroid 5 alpha reductase type2 product : steroid 5 alpha-reductase 2 protein_id : NP_444418.1

name	Memo1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19526994 CCDS:CCDS28969.1 GeneID:76890 MGI:1924140
definition	codon_start : 1 product : C21orf19-like protein protein_id : NP_598532.1

name	2810410M20Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34328329 CCDS:CCDS28970.1 GeneID:66310 MGI:1913560
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] codon_start : 1 exception : mismatches in translation function : probably involved in chromatin remodelling product : dosage compensation-related protein DPY30 protein_id : NP_077746.2

name	Spast (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:39930369 GeneID:50850 MGI:1858896
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] codon_start : 1 exception : mismatches in translation product : spastic paraplegia 4 homolog protein_id : NP_058658.1

name	Slc30a6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31559966 GeneID:210148 MGI:2386741
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008324 - cation transporter activity [Evidence IEA]; GO:0005385 - zinc ion transporter activity [Evidence IDA] GO_process : GO:0006812 - cation transport [Evidence IEA]; GO:0006895 - Golgi to endosome transport [Evidence IDA]; GO:0006829 - zinc ion transport [Evidence IDA] codon_start : 1 note : zinc transporter-like 3; zinc transporter 6; solute carrier family 30 (zinc transporter), member 4 product : solute carrier family 30 (zinc transporter), member 6 protein_id : NP_659047.2

name	Nlrc4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:77736546 GeneID:268973 MGI:3036243
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence ISS]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS]; GO:0042803 - protein homodimerization activity [Evidence ISS]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006919 - caspase activation [Evidence ISS]; GO:0042742 - defense response to bacterium [Evidence ISS]; GO:0016045 - detection of bacterium [Evidence ISS]; GO:0006954 - inflammatory response [Evidence IMP]; GO:0050702 - interleukin-1 beta secretion [Evidence ISS]; GO:0043065 - positive regulation of apoptosis [Evidence ISS]; GO:0042981 - regulation of apoptosis [Evidence IMP]; GO:0043281 - regulation of caspase activity [Evidence IMP] codon_start : 1 product : caspase recruitment domain family, member 12 protein_id : NP_001028539.1

name	Yipf4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28076889 CCDS:CCDS28971.1 GeneID:67864 MGI:1915114
definition	GO_component : GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : Yip1 domain family, member 4 protein_id : NP_080693.2

name	LOC668709 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668709
definition	number : 2 pseudo : _no_value

name	LOC668709 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668709
definition	number : 1 pseudo : _no_value

name	LOC668775 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668775
definition	number : 2 pseudo : _no_value

name	LOC668775 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668775
definition	number : 1 pseudo : _no_value

name	LOC240160 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149268907 GeneID:240160
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 8 Proteins product : similar to glycoprotein, synaptic 2 pseudo : _no_value transcript_id : XR_035036.1

name	EG668716 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149268908 GeneID:668716 MGI:3647780
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 29 ESTs, 4 Proteins product : predicted gene, EG668716 pseudo : _no_value transcript_id : XR_002270.2

name	LOC668773 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149268909 GeneID:668773
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 307 ESTs, 4 Proteins product : similar to vacuolar ATPase subunit F pseudo : _no_value transcript_id : XR_035038.1

name	LOC100043883 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149268910 GeneID:100043883
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 125 ESTs, 5 Proteins product : similar to transcription elongation factor B (SIII), polypeptide 2 pseudo : _no_value transcript_id : XR_035039.1

name	LOC624159 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149268911 GeneID:624159
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 14 mRNAs, 1060 ESTs, 6 Proteins product : similar to ribosomal protein S6 pseudo : _no_value transcript_id : XR_035040.1

clone name	MSMg01-429L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-379M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-320H05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-116P21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-483N24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-432M01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377N02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-469O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-144N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-274N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-328P02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-322H03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-341K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-170F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-166E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-458H14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-400B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-275C13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-406G18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-235B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351D14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-442G03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-422B04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-505I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-095A01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-113O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502O04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-271M15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-510J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-046H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-233A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-115K08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-169O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-180E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-094D24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-165M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-392B10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-202H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-510L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-448K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-467J13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-537B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-466K16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-072C05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-392M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-311A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-386N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-232J10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-122E21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-170F16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-510K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-272M18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-361N06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-172I12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-376L06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-334I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-369P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-276M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-479J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-269A09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118G18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-544N06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-118O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-443N02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423N10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102D24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-168M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-068N11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-330N11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-289L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-145K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-532K09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-357J15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-113O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-300F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380L08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-115L16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-350A15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-148O24
singlet/doublet	singlet
plural/unique	plural

clone name	B6Ng01-105F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173K14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-298D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269F24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-241P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255B12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-220K16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-323H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302I11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-288J08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213F23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-053J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181P17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-313J09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-287K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293H05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-197L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291J14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294L15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-185E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233C10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-292O15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-127C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079J17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-259E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207I11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-165C08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-300C05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174K22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-052G18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149M18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-315H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297B07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-083B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-327K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175I07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-088G14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230J10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059E12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-222P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031G14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-309I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139J12
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-331H15.b	B6Ng01-331H15.g
ACC	GA117832	GA117833
length	1,054	1,079
definition	B6Ng01-331H15.b	B6Ng01-331H15.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(73,922,725 - 73,923,764)	(73,785,502 - 73,786,587)
sequence	ggaattcagggctatgctctctcctgtcactaagagattattctttccat agcatctcatgcacattttacaaggtgagaagagactcagaggggcctct tcacttagagttgtttcctgtctgcctgcccagggggcctttcaccatac cctctttgtagccactggcttagagaggtcacagctccagaacacaacag agagcaggtagagagctttgttagaagcagaaagaggctttgtgaagggg gttgttttgtttccttgccaactgctcctttggtcctggtagcccctctg cttgcttctgaggtctgagaaagcaattgggtcttaattattttccccct ctaaacctccatgctctggcccacacatgctagagagtcacagagaaatg catgactgtccttgcacccattccaacacagactggcctctgagtggcaa gagtcaaaggcagttcaactggcaaggtatagagtgttggtgtaagggta gagagtattgactctttgtctttgttagttggtttgggtccccatttgta gaaaaagaatttgcatacaaaggacttttataattgttgaggcttattat gttggtaattttgagcattactatatgaagtcattgggactcggttgcca aagcagagctgcacaacctggaaatcctgtatgcagcatgtatcccgtgg agacattcaacttgtcctcgttagtcactatcagtattgcatggaactgg agtctttggtgtccacatgaaacacagcaaaggctacaaaactggatgat ggcctggttttctactaacgcttgaccaatctgtgaatttaactctccct ataaaatgccatgaaatgtcccccttaagcagtcagttgtctgtgttccc ctatagccaggagtcccctcctcctccctcctactgggcctaaactctct tagagtctgagtctcattgaatttctttttgatattgcttatttgaattc cccagcccttatcttgttactcctcttctgagcaaactttaaataccagt tatt	gaattcaaagagacaccaggggcccgggatagtgactaaagactccttcc atgtaaaaatttacattgaaagccacagagatccatccatctactcaggg gaaaaaaatgaaggatgagtaagccaactaataaaattcttgcagaatgg gacaattgaagagactttgaataagccatcaggaagaatgatgtgccaca atgaagggagagaataaacgaaatcaaaaggcaaaggggaaatactgccc aaagtctgctcaaaatcctgaaggagaaaccatttaagccaccaatagaa agctgttgcttaagtcatgttgttgatgtgctagaagcccataacactac acagaagctcatgactaccctacagtccagtgtggagcaagaaggcataa actcatgaagaagcttcccagtcaagaatggctagcgaccattcaatata tggtcatcataaccacttattataatctgttaattgaataaatgttcttt cttacttccttataacttctaggcccttagttagcggatcctcgtaggaa ctggtaatacagatgccctgcatttgtgggagtcagcactgagctatagg caacaggagagcatataagggttcaagtgtaggggaagaaaattctattc tacttgatagggaagttgccaaaacttctaacacagcaccattctttggg gatttaaaagattagaagatgcctgctgggcagaaatgaggtaggaagca ttttacataggataaacaatacaggatgtgagacaatggtgtcaaaaaga atgcattttggaaatgacaagcaaatttggcatttgtaggtcatgaagta tgaagggagtgtcaactagggcaaaaagccagaggatagaaatgggcttc agatagaatgcttaggctgagaaagtgggccttcatctcataggagagag aaaggcgcagcaaggaagacatggagcttttaaattatcttcatccaacc atcctatttcttgattcctccccccaatgacttatctactctagtttttt cagcatagatggacatagttctttatttt
quality values	Open. Hide. 13 12 14 17 28 52 37 20 20 15 41 48 43 43 47 62 62 62 62 62 62 62 62 62 62 62 44 44 51 47 47 39 32 24 16 8 7 8 8 10 20 24 34 62 62 62 62 46 36 62 59 62 59 59 62 62 62 62 59 62 62 59 51 59 59 62 62 62 62 62 62 62 62 62 62 62 59 54 59 62 62 56 62 56 54 59 62 62 62 59 59 59 62 62 54 62 62 62 62 62 62 62 62 59 62 62 62 59 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 62 54 54 48 62 59 59 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 59 46 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 47 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 51 62 62 62 62 62 42 62 47 54 62 62 62 62 62 62 62 62 56 62 62 54 54 62 62 62 62 62 62 56 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 56 56 62 62 56 56 62 62 37 47 62 47 62 56 56 62 62 62 62 62 49 42 47 22 33 42 62 54 47 48 62 54 52 52 52 30 45 43 62 52 48 47 35 62 52 62 62 52 62 62 52 47 52 54 54 42 54 54 21 58 47 47 48 47 42 35 42 30 28 52 54 47 54 42 28 36 28 52 25 31 42 52 52 35 42 52 37 37 28 41 50 46 52 52 35 52 52 54 52 52 52 39 33 54 29 54 52 50 54 54 41 30 49 50 49 51 51 46 52 58 52 53 53 39 58 51 37 53 45 46 52 58 42 52 34 26 39 51 50 49 50 49 37 42 42 42 20 30 24 32 50 38 23 48 26 39 30 7 50 16 43 24 37 53 32 49 44 25 37 39 49 30 31 50 6 20 26 50 27 21 21 13 15 40 8 46 32 39 35 32 30 40 58 12 19 35 50 12 24 40 47 46 28 50 40 25 32 29 52 25 20 31 52 18 29 39 37 39 51 24 33 41 41 21 17 17 8 32 13 37 30 41 46 33 37 34 33 37 53 27 37 40 33 23 31 18 29 23 27 27 49 40 37 24 16 23 31 27 34 29 38 27 18 20 39 34 21 37 14 28 53 29 40 53 53 31 24 10 6 12 15 23 45 25 19 6 11 22 20 13 6 8 9 28 13 27 28 20 7 23 31 51 40 28 23 31 31 18 9 10 13 10 10 9 19 11 32 28 11 22 17 22 18 31 31 16 18 26 8 15 10 13 22 15 8 22 32 17 23 36 6 17 13 11 21 32 11 13 28 32 25 14 37 32 31 10 16 9 10 10 5 12 37 12 13 9 19 16 6 27 41 10 13 10 16 41 21 26 37 37 32 30 21 20 13 16 9 10 13 32 13 7 14 10 26 38 30 7 13 6 29 25 24 44 32 31 21 18 28 13 15 20 9 12 26 15 5 6 7 15 19 15 21 15 7 26 14 6 9 21 21 9 14 31 15 17 31 9 9 4 16 37 30 33 32 14 11 9 16 16 25 5 5 11 21 27 28	Open. Hide. 62 35 40 42 62 54 32 56 62 38 56 43 19 44 38 35 29 27 43 59 62 62 59 62 62 62 62 59 59 59 62 62 62 62 59 59 59 59 62 62 62 59 59 62 62 54 54 62 62 59 59 62 59 59 62 62 62 62 62 62 62 62 62 62 59 62 62 59 59 62 62 62 62 59 62 62 62 59 59 59 59 62 62 62 59 62 62 59 59 62 62 59 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 59 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 58 58 54 58 54 58 58 58 58 58 54 58 58 58 58 46 46 46 58 58 58 49 58 58 58 54 58 33 58 58 54 54 58 58 58 58 58 54 58 58 54 58 54 58 58 58 58 58 58 58 58 58 52 58 58 58 58 54 58 58 58 58 52 54 58 58 54 58 53 54 58 58 58 50 58 58 53 58 58 58 58 54 51 58 58 41 49 58 51 30 58 48 58 51 51 52 58 54 58 54 58 46 49 58 53 46 58 58 53 58 53 54 48 58 49 58 58 58 46 58 54 43 44 39 58 53 54 51 41 58 52 53 50 49 51 54 58 41 47 49 37 58 54 58 58 46 54 58 51 54 49 24 28 18 14 24 31 49 37 50 51 50 50 52 53 53 53 51 52 41 54 40 44 54 50 58 58 50 58 14 17 54 39 19 54 41 37 54 54 54 32 33 28 38 53 34 54 54 37 38 23 49 39 51 50 54 47 41 39 54 54 38 39 42 54 44 18 22 53 51 13 28 28 47 26 42 51 54 37 47 19 19 54 54 34 40 53 37 53 41 44 49 41 35 37 54 40 45 21 31 6 25 47 32 29 49 32 28 53 32 45 39 31 33 17 34 33 28 38 35 32 53 40 40 37 53 51 52 52 31 51 18 28 38 32 31 37 51 51 45 40 32 40 47 22 18 31 31 25 23 43 31 32 32 41 33 29 51 34 31 33 29 31 32 48 37 41 31 42 35 46 33 36 32 32 42 31 21 31 42 32 36 36 46 27 25 46 28 22 19 31 37 35 38 29 33 31 31 21 18 41 27 31 41 48 47 46 30 31 21 39 25 18 41 19 32 20 17 36 31 33 39 26 20 14 44 20 28 48 33 36 32 19 38 23 32 34 32 30 27 38 31 28 33 29 23 32 25 32 29 35 23 32 44 32 31 15 13 41 10 25 12 30 34 32 32 33 19 15 27 24 32 19 23 10 31 8 25 13 32 19 28 39 17 9 17 11 10 30 32 21 19 11 7 26 12 16 20 14 30 12 9 22 14 22 8 10 24 8 34 30 8 25 30 15 3 6 12 11 7 6 16 7 7 16 3 15 14 8 17 18 19 24 13 21 5 6 17 28 21 18 13 8 28 15 13 6 20 11 7 5 28 21 14 27 19 6 9 8 3 1 1 12 12 16 6 17 20 5 7 13 11 8 8 6 11 13 17 17 17 21 10 12 9 12 10 16 25 16 22 8 15 5 24 11 10 12 3 5 10 7 14 17 28 17 13 8 17 16 17

Alignment Information

BAC End 1

BAC End 2

seq1: chr17_73922725_73923764
seq2: B6Ng01-331H15.b_48_1101 (reverse)

seq1  AATAACTTGGTATTTAAATTTTTGCTCAG-AGAGGAGTAACAGGATAAGG  49
      |||||| |||||||||||  ||||||||| |||||||||||| |||||||
seq2  AATAAC-TGGTATTTAAA-GTTTGCTCAGAAGAGGAGTAACAAGATAAGG  48

seq1  GCTGGGGAATTCAAAT-AGCAATATCAAAAAGAATTTCAATGAGACTCCG  98
      |||||||||||||||| ||||||||||||||||| ||||||||||||| |
seq2  GCTGGGGAATTCAAATAAGCAATATCAAAAAGAAATTCAATGAGACTCAG  98

seq1  ACTCTAAGAGAGTTTAGG-CCAGTAGGAGGGAGGAGGAGGGGACT-CTGG  146
      |||||||||||||||||| |||||||||||||||||||||||||| ||||
seq2  ACTCTAAGAGAGTTTAGGCCCAGTAGGAGGGAGGAGGAGGGGACTCCTGG  148

seq1  CTATAGGGG-ACACAGAC-ACTG-CTGCTT-AGGGGGACA-TTCATGGCA  191
      ||||||||| |||||||| |||| |||||| ||||||||| |||||||||
seq2  CTATAGGGGAACACAGACAACTGACTGCTTAAGGGGGACATTTCATGGCA  198

seq1  TTTTATAGGGAGAGTTAAATTCACAGATTGGTC-AGCGTTAGTAG-AAAC  239
      ||||||||||||||||||||||||||||||||| ||||||||||| ||||
seq2  TTTTATAGGGAGAGTTAAATTCACAGATTGGTCAAGCGTTAGTAGAAAAC  248

seq1  CAGGCCATCATCCAG-TTTGTAGCCTTTGCTGTG-TTCATGTGGACACC-  286
      ||||||||||||||| |||||||||||||||||| |||||||||||||| 
seq2  CAGGCCATCATCCAGTTTTGTAGCCTTTGCTGTGTTTCATGTGGACACCA  298

seq1  AAGACTCCAGTTCCATGCAATACTGATAGTGACTAACGAGGACAAGTTGA  336
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTCCAGTTCCATGCAATACTGATAGTGACTAACGAGGACAAGTTGA  348

seq1  ATGTCTCCACGGGATACATGCTGCATACAGGATTTCCAGGTTGTGCAGCT  386
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTCCACGGGATACATGCTGCATACAGGATTTCCAGGTTGTGCAGCT  398

seq1  CTGCTTTGGCAACCGAGTCCCAATGACTTCATATAGTAATGCTCAAAATT  436
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTTGGCAACCGAGTCCCAATGACTTCATATAGTAATGCTCAAAATT  448

seq1  ACCAACATAATAAGCCTCAACAATTATAAAAGTCCTTTGTATGCAAATTC  486
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAACATAATAAGCCTCAACAATTATAAAAGTCCTTTGTATGCAAATTC  498

seq1  TTTTTCTACAAATGGGGACCCAAACCAACTAACAAAGACAAAGAGTCAAT  536
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTACAAATGGGGACCCAAACCAACTAACAAAGACAAAGAGTCAAT  548

seq1  ACTCTCTACCCTTACACCAACACTCTATACCTTGCCAGTTGAACTGCCTT  586
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTCTACCCTTACACCAACACTCTATACCTTGCCAGTTGAACTGCCTT  598

seq1  TGACTCTTGCCACTCAGAGGCCAGTCTGTGTTGGAATGGGTGCAAGGACA  636
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCTTGCCACTCAGAGGCCAGTCTGTGTTGGAATGGGTGCAAGGACA  648

seq1  GTCATGCATTTCTCTGTGACTCTCTAGCATGTGTGGGCCAGAGCATGGAG  686
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATGCATTTCTCTGTGACTCTCTAGCATGTGTGGGCCAGAGCATGGAG  698

seq1  GTTTAGAGGGGGAAAATAATTAAGACCCAATTGCTTTCTCAGACCTCAGA  736
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAGAGGGGGAAAATAATTAAGACCCAATTGCTTTCTCAGACCTCAGA  748

seq1  AGCAAGCAGAGGGGCTACCAGGACCAAAGGAGCAGTTGGCAAGGAAACAA  786
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGCAGAGGGGCTACCAGGACCAAAGGAGCAGTTGGCAAGGAAACAA  798

seq1  AACAACCCCCTTCACAAAGCCTCTTTCTGCTTCTAACAAAGCTCTCTACC  836
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACCCCCTTCACAAAGCCTCTTTCTGCTTCTAACAAAGCTCTCTACC  848

seq1  TGCTCTCTGTTGTGTTCTGGAGCTGTGACCTCTCTAAGCCAGTGGCTACA  886
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTCTGTTGTGTTCTGGAGCTGTGACCTCTCTAAGCCAGTGGCTACA  898

seq1  AAGAGGGTATGGTGAAAGGCCCCCTGGGCAGGCAGACAGGAAACAACTCT  936
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGGTATGGTGAAAGGCCCCCTGGGCAGGCAGACAGGAAACAACTCT  948

seq1  AAGTGAAGAGGCCCCTCTGAGTCTCTTCTCACCTTGTAAAATGTGCATGA  986
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGAAGAGGCCCCTCTGAGTCTCTTCTCACCTTGTAAAATGTGCATGA  998

seq1  GATGCTATGGAAAGAAT-TTCTCTTAGTGACAGGAGAGAGCATAG-CCTG  1034
      |||||||||||||||||  |||||||||||||||||||||||||| ||||
seq2  GATGCTATGGAAAGAATAATCTCTTAGTGACAGGAGAGAGCATAGCCCTG  1048

seq1  AATTCC  1040
      ||||||
seq2  AATTCC  1054

seq1: chr17_73785502_73786587
seq2: B6Ng01-331H15.g_67_1145

seq1  GAATTCAAAGAGACACCAGGGGCCCGGGATAGTGACTAAAGACTCCTTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAGAGACACCAGGGGCCCGGGATAGTGACTAAAGACTCCTTCC  50

seq1  ATGTAAAAATTTACATTGAAAGCCACAGAGATCCATCCATCTACTCAGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAAAAATTTACATTGAAAGCCACAGAGATCCATCCATCTACTCAGGG  100

seq1  GAAAAAAATGAAGGATGAGTAAGCCAACTAATAAAATTCTTGCAGAATGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAAATGAAGGATGAGTAAGCCAACTAATAAAATTCTTGCAGAATGG  150

seq1  GACAATTGAAGAGACTTTGAATAAGCCATCAGGAAGAATGATGTGCCACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAATTGAAGAGACTTTGAATAAGCCATCAGGAAGAATGATGTGCCACA  200

seq1  ATGAAGGGAGAGAATAAACGAAATCAAAAGGCAAAGGGGAAATACTGCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGGGAGAGAATAAACGAAATCAAAAGGCAAAGGGGAAATACTGCCC  250

seq1  AAAGTCTGCTCAAAATCCTGAAGGAGAAACCATTTAAGCCACCAATAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCTGCTCAAAATCCTGAAGGAGAAACCATTTAAGCCACCAATAGAA  300

seq1  AGCTGTTGCTTAAGTCATGTTGTTGATGTGCTAGAAGCCCATAACACTAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTTGCTTAAGTCATGTTGTTGATGTGCTAGAAGCCCATAACACTAC  350

seq1  ACAGAAGCTCATGACTACCCTACAGTCCAGTGTGGAGCAAGAAGGCATAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAGCTCATGACTACCCTACAGTCCAGTGTGGAGCAAGAAGGCATAA  400

seq1  ACTCATGAAGAAGCTTCCCAGTCAAGAATGGCTAGCGACCATTCAATATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATGAAGAAGCTTCCCAGTCAAGAATGGCTAGCGACCATTCAATATA  450

seq1  TGGTCATCATAACCACTTATTATAATCTGTTAATTGAATAAATGTTCTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCATCATAACCACTTATTATAATCTGTTAATTGAATAAATGTTCTTT  500

seq1  CTTACTTCCTTATAACTTCTAGGCCCTTAGTTAGCGGATCCTCGTAGGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACTTCCTTATAACTTCTAGGCCCTTAGTTAGCGGATCCTCGTAGGAA  550

seq1  CTGGTAATACAGATGCCCTGCATTTGTGGGAGTCAGCACTGAGCTATAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTAATACAGATGCCCTGCATTTGTGGGAGTCAGCACTGAGCTATAGG  600

seq1  CAACAGGAGAGCATATAAGGGTTCAAGTGTAGGGGAAGAAAATTCTATTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGGAGAGCATATAAGGGTTCAAGTGTAGGGGAAGAAAATTCTATTC  650

seq1  TACTTGATAGGGAAGTTGCCAAAACTTCTAACACAGCACCATTCTTTGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTGATAGGGAAGTTGCCAAAACTTCTAACACAGCACCATTCTTTGGG  700

seq1  GATTTAAAAGATTAGAAGATGCCTGCTGGGCAGAAATGAGGTAGGAAGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTAAAAGATTAGAAGATGCCTGCTGGGCAGAAATGAGGTAGGAAGCA  750

seq1  TTTTACATAGGATAAACAA-ACAGGATGTGAGACAATGGTGTCAAAAAGA  799
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TTTTACATAGGATAAACAATACAGGATGTGAGACAATGGTGTCAAAAAGA  800

seq1  ATGCATTTTGGAAATGACAAGCAAATTTGGCATTTGTAGGTCATGAAGTA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATTTTGGAAATGACAAGCAAATTTGGCATTTGTAGGTCATGAAGTA  850

seq1  TGAAGGGAGTGTCAACTAGGGCAAAAAGCCAGAGGATAGAAAT-GGCTTC  898
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TGAAGGGAGTGTCAACTAGGGCAAAAAGCCAGAGGATAGAAATGGGCTTC  900

seq1  AGATAGAATGCTTAGGCTGAGAAAGT-GGCCTTCATCTCATAGGAGAGAG  947
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  AGATAGAATGCTTAGGCTGAGAAAGTGGGCCTTCATCTCATAGGAGAGAG  950

seq1  AAAGGCGCAGCAAGGAAGACATGGAGCTTTAAAATTATCTTTCATTCCAA  997
      |||||||||||||||||||||||||||||| |||||||| |||| |||||
seq2  AAAGGCGCAGCAAGGAAGACATGGAGCTTTTAAATTATC-TTCA-TCCAA  998

seq1  CCATCCTATTTCTTGATTCCTCCCCCCAATTGGTTTATCTTACTCTTAGT  1047
      ||||||||||||||||||||||||||||| ||  ||||| ||||| ||| 
seq2  CCATCCTATTTCTTGATTCCTCCCCCCAA-TGACTTATC-TACTC-TAG-  1044

seq1  TTTTTTCAGCATAAGATGAACATTAAGTTCTTTTATTTT  1086
      |||||||||||| ||||| ||||  ||||| ||||||||
seq2  TTTTTTCAGCAT-AGATGGACAT--AGTTC-TTTATTTT  1079

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information