BAC Information

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BAC

Clone NameB6Ng01-332H22
Chromosome17 (Build37)
Map Location 50,435,024 - 50,622,433
singlet/doubletdoublet
Overlap genenone
Upstream geneMocs1, Daam2, Kif6, EG668470, Rftn1, EG668475, EG628747, LOC100043818, Dazl
Downstream genePlcl2, EG654432, Tbc1d5, LOC100043451
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-332H22.bB6Ng01-332H22.g
ACCGA118579GA118580
length1,009939
definitionB6Ng01-332H22.b B6Ng01-332H22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(50,435,024 - 50,435,980)(50,621,495 - 50,622,433)
sequence
gaattctctctgtagaccaggctggcctcgaacttacagagacccacttg
cctctgcctgagggcccagcactctccgctcttttactgctttaatcggg
gctggagagatggctcagcagttaagagcactgactgctcttccgaaggt
tctgagttcaaatcccagcaaccacatggtggcttacaaccatccttaat
gacatctgactccctctcctggtgtgtctgaagacagctacagtgtactt
acatataaaataaataataaataaagtcttaaaaaaaaccatacacttta
aatagaaagctaataaatatgttccctcttaaataattcaaaggcctcag
gatgattttattagtaaactcccctcccagtttaaactggctggttttca
ggttccttctgttagcctcctgtaagtcagccgttgtggccacacagaga
aacattgtgatccccattttacctcctgctctcctggctccctcccagtt
tagttctcttattccatttcccctttatctctccatcacaatacaccata
ttccccctttcctgcacgatcacattctccaccatggacttactaagtac
ttaacctgtgtggttatctggattgtaggaaacttatcaaaaaattcgta
aagcatataaaagctaatatctatatataagagaaaatatgtgatttttt
ttttgaagtctgggttgcctcacacgggataagttttatagttccttcga
tttacctgcaaacttcgtttttcttaataggcgaattaatagtgcttcat
agacgtttgtgtttcctcttttgagaatactctgattaattctagatctc
attttttagtttgagttttgtttcttcgtgtttaggtagttccgttctta
tacatttctagatattaacctatgttgtaggctgctgatttgcctaaagg
atgctgccctttgctgtaagcaggttctcaccttatgaagtctcatattt
ttggtcttc

gaattcagatggttaatcttggcagcatgtgctgtcatcatttttttttt
cctcctagaaatcactttctcagattcaagtcatgcattttttgacagtc
tttgccaagataaaccctcatccgttgcatctttatcttctgtcagttag
attatttaattccttaaaggtaggaatggtcccttccactgtattttttt
gatgacttagtcactcatctttactgtttgtgctaattggctgaaaagac
taagtaaaaacctgccttttccaggatctgcattcacttttactgcagat
cagtcgtggtgagctagaagtcctcctgattgttctggaatcactgctgt
cggaggccaacaacacaaatagacttttcacactcacacagctctgttaa
ctataggcctgctgtggctgatggtcaggcaagtgctttacaataaattt
gcctaattaaagatgtcacctgaaatgcagagatggccagccctgtaggc
ttaagtggcctcctctcactgcctagtaacaggtcccatcttaaattcta
acctgagccacaaatacagaggcagatgtttgcagccaaccattgggctg
aacacagggtccccaatggaggagttagagaaaggactgaaggactgaaa
ctgaaggggcttgcatcccataggaagaacaatatcacctgaccagactc
ccgagagctcccaggaactaaaccaccaatcaaagagtacacatggatca
acccatggctccagccacagatgtagcagaggatgaccttgtgggacatc
aatgagtggagaggtccttggtcttgagaaggctctatgtcccagtgtag
gtgaatgccagtgtggtgaggcaggagtgggtgagtgggtagggaaacac
cctcagagaagcagggggcagggatgggaatagggggtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_50435024_50435980
seq2: B6Ng01-332H22.b_47_1004

seq1  GAATTCTCTCTGTAGACCAGGCTGGCCTCGAACTTACAGAGACCCACTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCTGTAGACCAGGCTGGCCTCGAACTTACAGAGACCCACTTG  50

seq1  CCTCTGCCTGAGGGCCCAGCACTCTCCGCTCTTTTACTGCTTTAATCGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGCCTGAGGGCCCAGCACTCTCCGCTCTTTTACTGCTTTAATCGGG  100

seq1  GCTGGAGAGATGGCTCAGCAGTTAAGAGCACTGACTGCTCTTCCGAAGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGAGAGATGGCTCAGCAGTTAAGAGCACTGACTGCTCTTCCGAAGGT  150

seq1  TCTGAGTTCAAATCCCAGCAACCACATGGTGGCTTACAACCATCCTTAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGTTCAAATCCCAGCAACCACATGGTGGCTTACAACCATCCTTAAT  200

seq1  GACATCTGACTCCCTCTCCTGGTGTGTCTGAAGACAGCTACAGTGTACTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATCTGACTCCCTCTCCTGGTGTGTCTGAAGACAGCTACAGTGTACTT  250

seq1  ACATATAAAATAAATAATAAATAAAGTCTTAAAAAAAACCATACACTTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATAAAATAAATAATAAATAAAGTCTTAAAAAAAACCATACACTTTA  300

seq1  AATAGAAAGCTAATAAATATGTTCCCTCTTAAATAATTCAAAGGCCTCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGAAAGCTAATAAATATGTTCCCTCTTAAATAATTCAAAGGCCTCAG  350

seq1  GATGATTTTATTAGTAAACTCCCCTCCCAGTTTAAACTGGCTGGTTTTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGATTTTATTAGTAAACTCCCCTCCCAGTTTAAACTGGCTGGTTTTCA  400

seq1  GGTTCCTTCTGTTAGCCTCCTGTAAGTCAGCCGTTGTGGCCACACAGAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCCTTCTGTTAGCCTCCTGTAAGTCAGCCGTTGTGGCCACACAGAGA  450

seq1  AACATTGTGATCCCCATTTTACCTCCTGCTCTCCTGGCTCCCTCCCAGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTGTGATCCCCATTTTACCTCCTGCTCTCCTGGCTCCCTCCCAGTT  500

seq1  TAGTTCTCTTATTCCATTTCCCCTTTATCTCTCCATCACAATACACCATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTCTCTTATTCCATTTCCCCTTTATCTCTCCATCACAATACACCATA  550

seq1  TTCCCCCTTTCCTGCACGATCACATTCTCCACCATGGACTTACTAAGTAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCCTTTCCTGCACGATCACATTCTCCACCATGGACTTACTAAGTAC  600

seq1  TTAACCTGTGTGGTTATCTGGATTGTAGGAAACTTATCAAAAAATTCGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACCTGTGTGGTTATCTGGATTGTAGGAAACTTATCAAAAAATTCGTA  650

seq1  AAGCATATAAAAGCTAATATCTATATATAAGAGAAAATATGTGATTTTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATATAAAAGCTAATATCTATATATAAGAGAAAATATGTGATTTTTT  700

seq1  TTTTGAAGTCTGGGTTGCCTCACACGGGATAAGTTTTATAGTTCCTTCGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAAGTCTGGGTTGCCTCACACGGGATAAGTTTTATAGTTCCTTCGA  750

seq1  TTTACCTGCAAACTTCGTTTTTCTTAATAGGCGAATTAATAGTGCTTCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCTGCAAACTTCGTTTTTCTTAATAGGCGAATTAATAGTGCTTCAT  800

seq1  AGACGTTTGTGTTTCCTCTTTTGAGAATACTCTGATTAATTCTAGATCTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACGTTTGTGTTTCCTCTTTTGAGAATACTCTGATTAATTCTAGATCTC  850

seq1  ATTTTTTAG-TTGAGTTTTGTTTCTTCGTGTTTAGGTAGTTCCGTTCTTT  899
      ||||||||| ||||||||||||||||||||||||||||||||||||| ||
seq2  ATTTTTTAGTTTGAGTTTTGTTTCTTCGTGTTTAGGTAGTTCCGTTC-TT  899

seq1  ATACA-TTCTAGATATTAACCTATGTTGTAGGCTGCTGATTTGCCTAAAG  948
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATTTCTAGATATTAACCTATGTTGTAGGCTGCTGATTTGCCTAAAG  949

seq1  GATGCTGCC  957
      |||||||||
seq2  GATGCTGCC  958


seq1: chr17_50621495_50622433
seq2: B6Ng01-332H22.g_71_1009 (reverse)

seq1  AACCCCCTA-TCCCATCCCTGCCCCCCTGCTTCTCTGAGGGTGTTTCCCT  49
      ||||||||| ||||||||||| ||||||||||||||||||||||||||||
seq2  AACCCCCTATTCCCATCCCTG-CCCCCTGCTTCTCTGAGGGTGTTTCCCT  49

seq1  ACCCACTCACCCACTCCTGCCTCACCACACTGGCATTCACCTACACTGGG  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACTCACCCACTCCTGCCTCACCACACTGGCATTCACCTACACTGGG  99

seq1  ACATAGAGCCTTCTCAAGACCAAGGACCTCTCCACTCATTGATGTCCCAC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGAGCCTTCTCAAGACCAAGGACCTCTCCACTCATTGATGTCCCAC  149

seq1  AAGGTCATCCTCTGCTACATCTGTGGCTGGAGCCATGGGTTGATCCATGT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTCATCCTCTGCTACATCTGTGGCTGGAGCCATGGGTTGATCCATGT  199

seq1  GTACTCTTTGATTGGTGGTTTAGTTCCTGGGAGCTCTCGGGAGTCTGGTC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTCTTTGATTGGTGGTTTAGTTCCTGGGAGCTCTCGGGAGTCTGGTC  249

seq1  AGGTGATATTGTTCTTCCTATGGGATGCAAGCCCCTTCAGTTTCAGTCCT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGATATTGTTCTTCCTATGGGATGCAAGCCCCTTCAGTTTCAGTCCT  299

seq1  TCAGTCCTTTCTCTAACTCCTCCATTGGGGACCCTGTGTTCAGCCCAATG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCCTTTCTCTAACTCCTCCATTGGGGACCCTGTGTTCAGCCCAATG  349

seq1  GTTGGCTGCAAACATCTGCCTCTGTATTTGTGGCTCAGGTTAGAATTTAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGCTGCAAACATCTGCCTCTGTATTTGTGGCTCAGGTTAGAATTTAA  399

seq1  GATGGGACCTGTTACTAGGCAGTGAGAGGAGGCCACTTAAGCCTACAGGG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGGACCTGTTACTAGGCAGTGAGAGGAGGCCACTTAAGCCTACAGGG  449

seq1  CTGGCCATCTCTGCATTTCAGGTGACATCTTTAATTAGGCAAATTTATTG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCCATCTCTGCATTTCAGGTGACATCTTTAATTAGGCAAATTTATTG  499

seq1  TAAAGCACTTGCCTGACCATCAGCCACAGCAGGCCTATAGTTAACAGAGC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCACTTGCCTGACCATCAGCCACAGCAGGCCTATAGTTAACAGAGC  549

seq1  TGTGTGAGTGTGAAAAGTCTATTTGTGTTGTTGGCCTCCGACAGCAGTGA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGAGTGTGAAAAGTCTATTTGTGTTGTTGGCCTCCGACAGCAGTGA  599

seq1  TTCCAGAACAATCAGGAGGACTTCTAGCTCACCACGACTGATCTGCAGTA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGAACAATCAGGAGGACTTCTAGCTCACCACGACTGATCTGCAGTA  649

seq1  AAAGTGAATGCAGATCCTGGAAAAGGCAGGTTTTTACTTAGTCTTTTCAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGAATGCAGATCCTGGAAAAGGCAGGTTTTTACTTAGTCTTTTCAG  699

seq1  CCAATTAGCACAAACAGTAAAGATGAGTGACTAAGTCATCAAAAAAATAC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATTAGCACAAACAGTAAAGATGAGTGACTAAGTCATCAAAAAAATAC  749

seq1  AGTGGAAGGGACCATTCCTACCTTTAAGGAATTAAATAATCTAACTGACA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGAAGGGACCATTCCTACCTTTAAGGAATTAAATAATCTAACTGACA  799

seq1  GAAGATAAAGATGCAACGGATGAGGGTTTATCTTGGCAAAGACTGTCAAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATAAAGATGCAACGGATGAGGGTTTATCTTGGCAAAGACTGTCAAA  849

seq1  AAATGCATGACTTGAATCTGAGAAAGTGATTTCTAGGAGGAAAAAAAAAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCATGACTTGAATCTGAGAAAGTGATTTCTAGGAGGAAAAAAAAAA  899

seq1  TGATGACAGCACATGCTGCCAAGATTGACCATCTGAATTC  939
      |||||||||||||||||||||||||| |||||||||||||
seq2  TGATGACAGCACATGCTGCCAAGATTAACCATCTGAATTC  939


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