BAC Information

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BAC

Clone NameB6Ng01-333F05
Chromosome17 (Build37)
Map Location 94,250,868 - 94,252,027
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043746, LOC100043747, LOC100043748, LOC100043907, Adcyap1, LOC676157, LOC627503
Downstream geneLOC668885, LOC668886, Mettl4, 2700099C18Rik, LOC100043754, LOC668888, LOC100038868
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-333F05.bB6Ng01-333F05.g
ACCGA119168GA119169
length1,2261,140
definitionB6Ng01-333F05.b B6Ng01-333F05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcatttctgagccccattttttaatggggttatttgatt
ttatggagtctaccttcttgagttctttatatatattaaatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggcct
tttttgtcttattgacggtgtcttttgccttgcaaaagctttgcagtttc
atgagatcccatttgtcaattctcgatcttatagcgcaagccattgtttt
tctattcaggaatttttcccctgtgcccatatcttcaaggcttttcccca
ctttctcctctataagtttcagtgtctctgattttatgtgaagttccttg
atccacttagatttgaccttagtacaaggagataggaataaattgattag
cattcttctacatgataacaaccaggtgtgccagcaccatttgttgaaaa
tgctgtctttcttccactggatggttttagcctcccttgtcgaagatcaa
gtgaccataggtgtgtgggttcatttctgggtcttcaattctattccatt
ggtctacttgtctgtcactataccagtaccacgcagtttttaccacaatt
gctctttagtacagctttaggtcaggcatgatgattccaccagaggttct
tttatctttgagaagagtttttgctatcctaggttttttgttattccaga
tgaatttgcagattgctctttctaattcgttgaagaattgagttggaatt
ttgatggggattgcattgaatctgaagattgcttttggcaagatagccat
ttttacaatgttgatcctgccaatccatgagcatgggagatctttccatc
ttctgagatcttctttaatttctttcttcagatatttgaagtttttatta
tacagatctttcacttgcttagttagagtcacgccaagatattttatatt
atttgtgactattgagaagggtgtgtttccctaatttctttctcagcctg
ttattctttgtatacagaaaggcatttgagttgttgatttcattttatat
cagcttactcacggagctgtttatcagcttaggagttctctggtggaatt
ttagagtcacatattatatctatccattcatctgcaaacgtgcaatttga
acttcttctttcattgatctggatcctttgttgcatgcctggctagactc
agacaagttgaataagtatatggtga

gaattcataatatcaagacccaaacaaaaatagattgacagtcctactct
cagcctatactttgtaaaacatatatgcactccctcatagacaagaagcc
taagactccaaaccctgatttggtagtttggatatgcttggcccaggaag
tggttctattacgagaggtaggtgtggccttgttatggaagtgtgtcagt
gtggagtgggctttgagaccctcctcctagttgtctagaagttagtcttc
tcctgaacagctactacagctccatgtctgtctggacacttccatgctaa
tgtgtatataggagtctctttgtgtatatacatacatgagtgctatacct
tctgagactagaagcataaactaatgatatatgacatataagggaactga
gataattggctgaggtgcattgcaatctggtgatataaatttaccttctg
ataatttcttttacccatgagatagcaatggcccttcttaaagtcaggct
tgaggcaagatccaggaactttagacaagctgagttcataggtggaaggt
ctcatacattggagtttctgctgctttatggaaggaagacaaattgaaga
acagaatttgtaaagacattcaaataaaaggttttagggggttcattaaa
tacccaaaatacaatggagttaggggctgtagaggcagttcaggggcttt
taaaagtatactctgctcttctggaggatttgagttaggtttctagtacc
cacatcaagcaaatcaccagtgtctgtaacttcagtctattgcaggcact
gcactcgtgtgcacttacctgcacacacacacaattaaaaacaagaaagg
ggaaaatgtagcttgcaatagccaactagactcaaggtgcatctcgttca
agcacagtcagtatttgtgtggttatcgtatgaaagtgcaattccatcta
tgtgtaaggagctttctatgtgatgtaacacactgagtgtggactgctaa
tttcagaaagagatcaccaaaactgtctagcaaagagcatgcttatagtt
taatgcatataattttatttttatattctttgaaaaagttaatagttaca
catatatttagagattctcagtttatcatctatttttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_94250868_94252027
seq2: B6Ng01-333F05.g_68_1207

seq1  GAATTCATAATATCAAGACCCAAACAAAAATAGATTGACAGTCCTACTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAATATCAAGACCCAAACAAAAATAGATTGACAGTCCTACTCT  50

seq1  CAGCCTATACTTTGTAAAACATATATGCACTCCCTCATAGACAAGAAGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTATACTTTGTAAAACATATATGCACTCCCTCATAGACAAGAAGCC  100

seq1  TAAGACTCCAAACCCTGATTTGGTAGTTTGGATATGCTTGGCCCAGGAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGACTCCAAACCCTGATTTGGTAGTTTGGATATGCTTGGCCCAGGAAG  150

seq1  TGGTTCTATTACGAGAGGTAGGTGTGGCCTTGTTATGGAAGTGTGTCAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTCTATTACGAGAGGTAGGTGTGGCCTTGTTATGGAAGTGTGTCAGT  200

seq1  GTGGAGTGGGCTTTGAGACCCTCCTCCTAGTTGTCTAGAAGTTAGTCTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAGTGGGCTTTGAGACCCTCCTCCTAGTTGTCTAGAAGTTAGTCTTC  250

seq1  TCCTGAACAGCTACTACAGCTCCATGTCTGTCTGGACACTTCCATGCTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGAACAGCTACTACAGCTCCATGTCTGTCTGGACACTTCCATGCTAA  300

seq1  TGTGTATATAGGAGTCTCTTTGTGTATATACATACATGAGTGCTATACCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTATATAGGAGTCTCTTTGTGTATATACATACATGAGTGCTATACCT  350

seq1  TCTGAGACTAGAAGCATAAACTAATGATATATGACATATAAGGGAACTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGACTAGAAGCATAAACTAATGATATATGACATATAAGGGAACTGA  400

seq1  GATAATTGGCTGAGGTGCATTGCAATCTGGTGATATAAATTTACCTTCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAATTGGCTGAGGTGCATTGCAATCTGGTGATATAAATTTACCTTCTG  450

seq1  ATAATTTCTTTTACCCATGAGATAGCAATGGCCCTTCTTAAAGTCAGGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTTCTTTTACCCATGAGATAGCAATGGCCCTTCTTAAAGTCAGGCT  500

seq1  TGAGGCAAGATCCAGGAACTTTAGACAAGCTGAGTTCATAGGTGGAAGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCAAGATCCAGGAACTTTAGACAAGCTGAGTTCATAGGTGGAAGGT  550

seq1  CTCATACATTGGAGTTTCTGCTGCTTTATGGAAGGAAGACAAATTGAAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATACATTGGAGTTTCTGCTGCTTTATGGAAGGAAGACAAATTGAAGA  600

seq1  ACAGAATTTGTAAAGACATTCAAATAAAAGGTTTTAGGGGGTTCATTAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAATTTGTAAAGACATTCAAATAAAAGGTTTTAGGGGGTTCATTAAA  650

seq1  TACCCAAAATACAATGGAGTTAGGGGCTGTAGAGGCAGTTCAGGGGCTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCAAAATACAATGGAGTTAGGGGCTGTAGAGGCAGTTCAGGGGCTTT  700

seq1  TAAAAGTATACTCTGCTCTTCTGGAGGATTTGAGTTAGGTTTCTAGTACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGTATACTCTGCTCTTCTGGAGGATTTGAGTTAGGTTTCTAGTACC  750

seq1  CACATCAAGCAAATCACCAGTGTCTGTAACTTCAGTCTATTGCAGGCACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATCAAGCAAATCACCAGTGTCTGTAACTTCAGTCTATTGCAGGCACT  800

seq1  GCACTCGTGTGCACTTACCTGCACACACACACAATTAAAAACAAGAAAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTCGTGTGCACTTACCTGCACACACACACAATTAAAAACAAGAAAGG  850

seq1  GGAAAATGTAGCTTGCAATAGCCAACTAGACTCAAGGTGCATCTCGTTCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAATGTAGCTTGCAATAGCCAACTAGACTCAAGGTGCATCTCGTTCA  900

seq1  AGCACAGTCAGTATTTGTGTGGTTATCGTATGAAAGTGCAATTCCATCTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACAGTCAGTATTTGTGTGGTTATCGTATGAAAGTGCAATTCCATCTA  950

seq1  TGTGTAAGGAGCTTTCTATGTGAATGTAACACACTGAGTGTGGACTGCTA  1000
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TGTGTAAGGAGCTTTCTATGTG-ATGTAACACACTGAGTGTGGACTGCTA  999

seq1  ATTTCAGAAAAGAGATCACCAAAAACTGTCTAGCAAAGGAGCAATGCTTA  1050
      ||||||| |||||||||||| |||||||||||||||| |||| |||||||
seq2  ATTTCAG-AAAGAGATCACC-AAAACTGTCTAGCAAA-GAGC-ATGCTTA  1045

seq1  TAAGTTTTAATGCATATAAATTTTAATTTTTATA-TCTTTGAAAAAAGTT  1099
      ||   ||||||||||||||  ||| ||||||||| |||||| ||||||||
seq2  TA--GTTTAATGCATATAA--TTTTATTTTTATATTCTTTG-AAAAAGTT  1090

seq1  AAAATGTTTACACAATTAATATTTAGAGAATTCTTTAAGTTTTATCATCC  1149
        |||  |||||||    |||||||||| ||||  | || ||||||||| 
seq2  --AATAGTTACACA---TATATTTAGAG-ATTC--TCAG-TTTATCATC-  1130

seq1  TTATTTTTTTT  1160
       ||||||||||
seq2  -TATTTTTTTT  1140


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