BAC Information

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BAC

Clone NameB6Ng01-334I22
Chromosome17 (Build37)
Map Location 3,809,850 - 3,810,963
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC383196, LOC100040029, LOC432993, D030013I16Rik, LOC100040128, 1700024P12Rik, LOC435499, LOC224487, Rbm16, LOC665812, LOC621579, LOC624144, Tiam2, LOC630810, Tfb1m, Cldn20, 1700102H20Rik, Nox3
Downstream gene4930470H14Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-334I22.bB6Ng01-334I22.g
ACCGA120033GA120034
length1,1301,197
definitionB6Ng01-334I22.b B6Ng01-334I22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgtccaccattgaaatatgatctctcgtgagcccgtaactaact
aattagtctagactaggtgccagtgagtcccagggatgctcctgtctccc
cagccccaccacggggactacaggtattgcctccaatcccagcattttag
agtatgtattatcattgtgtgagggtgcatgggtgggtgggtgctcagct
gagcaggagcacttggagacaagaggtcaacttcaggtttccttccctag
tgttgtcccattgagttatcagacaaggtctctcgctgaacctgaagccc
actctttctgctacactggctggccagggagcctcaggcatccacctggg
attataggtatgagctgccacaccaggactttatgtgaatactgggaatc
tgaactaagaattgaacttactgtgtaggcactgagccactgagccaagt
ctgcagaaccccacccccatgatgtttgcatggtttctcagaatcactca
ggacttcacactgagagcaagacttcacagattggatgttcttcaatccc
tggtttatctcttatgagaaagaacatagccatgaatagtctttagatat
aagcagacttcctctactaaatcacgttgggcctcgtgaatgtctgaata
ctaccttacctttacagaaagtaatagtctatagctgatctgaattcttt
catggaaactgcattgcttggaatacccagtaaccaagaccactggaata
tgactcatgtctctctcctggctccaattcacatattgaaattcatctcg
ggagaatttgatgacataaatatccaatcaatattaatagcaatagtaat
gaaacaaccaatttttgcatgtatttgggccacttaagtctggagattcc
tcccctgccctttccttcactccctcctcttgtgtacaaccatgattaac
ctcagttcttcagtctttagatacctgacagtttcaaagtcccctatagt
attttttctgcctcctggtttcctcacagaccaaccagtttgcctcacta
taattttaatttctgtccactccccaacatagtcccagtgtgaatggaca
attatcctaagggacttaaacctcctgaaa
gaattcttacccgaggaataccgaatggcagagaagcacctgaaaaaatg
tcaacatctgtaatcatcagggaaatgcaaatcaaaacaccctgagattc
cacctcacaccagtcagaatggctagaatcaaaaattcaggtgacagcag
atgctggcgaggatgtggagaaagagaaacactcctccattgttggtggg
attgcaagcttgtacaaccactctggaaatcagtctggcagttcctcaga
aaattggacatagtactaccggaggatctcgcaatacctctcctgggcat
atatccagaagaggtcccaaccggtaagaaggacacatgttcctctatgt
taatagcagccttatttataatagccagaagctggaaagaacccagatgc
ccctcaacagaggaatggatacagaaaatgtggtacatttacacaatgga
gtactattcagctattaaaaagaatgaatttatgaaattcctaggcaaat
ggttggacctggagggcatcatcctgagtgaggtatcccaatcacaatgg
aactcacataatatgtacccactgataagtggatattagcccagaaactt
aggatacccaagatataagatacaatttgctaaatgcatgaaactgaaga
agaacgaagaccaaagtgtggacactttgccccttcttagaattgggaac
aaaacacccatggaaggagttacagagacaaagtttggagctgtgacgaa
aggatggaccatccagagactaccatatccggggatccatcctataatca
gcttccaaatgctgacaccattgaacacactagcaagattttgctgaaag
gacccagatagatctctctcttgtgagactatgctggggcctagcaaaca
cagaagtggatgatcacagtcagctattggatggatcacaggcccccaat
ggaggagctagagaaagtacccagagctaaagggatctgcaaccctatag
gtggaacacattatgactaaccagtaccccggagctcttgactgtagctg
catattgttatcaaaagaatggcttagtagtcatcactgggaaagagaga
ggttcatgacatgcaacggttatatgccccagttacatggaacgcaagct
aaattgggaatggtgtggataaggcgatacgtgccaattacctccgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_3809850_3810963
seq2: B6Ng01-334I22.b_49_1178 (reverse)

seq1  TTTC---AGGGTTAAGT--CTTTAGATAA-TGTCCAT--CCACTGGGACT  42
      ||||   ||| ||||||  |||  ||||| |||||||   ||||||||||
seq2  TTTCAGGAGGTTTAAGTCCCTTAGGATAATTGTCCATTCACACTGGGACT  50

seq1  ATGTGGGG----TGACAGATA-TAAATTTATAGTGA-GCAAACTGGTTTG  86
      |||| |||     |||||| | |||| ||||||||| ||||||||||| |
seq2  ATGTTGGGGAGTGGACAGAAATTAAAATTATAGTGAGGCAAACTGGTTGG  100

seq1  TCTGTGAGG-AACCAGGAGGCAG-AAAAATACTATAGGGGACTTTTGAAA  134
      ||||||||| ||||||||||||| |||||||||||||||||| |||||||
seq2  TCTGTGAGGAAACCAGGAGGCAGAAAAAATACTATAGGGGAC-TTTGAAA  149

seq1  CTGTCAGGTATCTAAAGACTGAGAACCTGAGGTTAATCATGGTTGTACAC  184
      ||||||||||||||||||||||  | ||||||||||||||||||||||||
seq2  CTGTCAGGTATCTAAAGACTGAAGAACTGAGGTTAATCATGGTTGTACAC  199

seq1  AAGAGGAGGGAGTGAAGGAAAGGGCAGGGGAGGAATCTCCAGACTTAAGT  234
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGAGGGAGTGAAGGAAAGGGCAGGGGAGGAATCTCCAGACTTAAGT  249

seq1  GG-CCAAATACATGCAAAAATTGGTTGTTTCATTACTATTGCTATTAATA  283
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCAAATACATGCAAAAATTGGTTGTTTCATTACTATTGCTATTAATA  299

seq1  TTGATTGGATATTTATGTCATCAAATTCTCCCGAGATGAATTTCAATATG  333
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTGGATATTTATGTCATCAAATTCTCCCGAGATGAATTTCAATATG  349

seq1  TGAATTGGAGCCAGGAGAGAGACATGAGTCATATTCCAGTGGTCTTGGTT  383
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTGGAGCCAGGAGAGAGACATGAGTCATATTCCAGTGGTCTTGGTT  399

seq1  ACTGGGTATTCCAAGCAATGCAGTTTCCATGAAAGAATTCAGATCAGCTA  433
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGGTATTCCAAGCAATGCAGTTTCCATGAAAGAATTCAGATCAGCTA  449

seq1  TAGACTATTACTTTCTGTAAAGGTAAGGTAGTATTCAGACATTCACGAGG  483
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACTATTACTTTCTGTAAAGGTAAGGTAGTATTCAGACATTCACGAGG  499

seq1  CCCAACGTGATTTAGTAGAGGAAGTCTGCTTATATCTAAAGACTATTCAT  533
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAACGTGATTTAGTAGAGGAAGTCTGCTTATATCTAAAGACTATTCAT  549

seq1  GGCTATGTTCTTTCTCATAAGAGATAAACCAGGGATTGAAGAACATCCAA  583
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTATGTTCTTTCTCATAAGAGATAAACCAGGGATTGAAGAACATCCAA  599

seq1  TCTGTGAAGTCTTGCTCTCAGTGTGAAGTCCTGAGTGATTCTGAGAAACC  633
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGAAGTCTTGCTCTCAGTGTGAAGTCCTGAGTGATTCTGAGAAACC  649

seq1  ATGCAAACATCATGGGGGTGGGGTTCTGCAGACTTGGCTCAGTGGCTCAG  683
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAAACATCATGGGGGTGGGGTTCTGCAGACTTGGCTCAGTGGCTCAG  699

seq1  TGCCTACACAGTAAGTTCAATTCTTAGTTCAGATTCCCAGTATTCACATA  733
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTACACAGTAAGTTCAATTCTTAGTTCAGATTCCCAGTATTCACATA  749

seq1  AAGTCCTGGTGTGGCAGCTCATACCTATAATCCCAGGTGGATGCCTGAGG  783
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCCTGGTGTGGCAGCTCATACCTATAATCCCAGGTGGATGCCTGAGG  799

seq1  CTCCCTGGCCAGCCAGTGTAGCAGAAAGAGTGGGCTTCAGGTTCAGCGAG  833
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTGGCCAGCCAGTGTAGCAGAAAGAGTGGGCTTCAGGTTCAGCGAG  849

seq1  AGACCTTGTCTGATAACTCAATGGGACAACACTAGGGAAGGAAACCTGAA  883
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCTTGTCTGATAACTCAATGGGACAACACTAGGGAAGGAAACCTGAA  899

seq1  GTTGACCTCTTGTCTCCAAGTGCTCCTGCTCAGCTGAGCACCCACCCACC  933
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGACCTCTTGTCTCCAAGTGCTCCTGCTCAGCTGAGCACCCACCCACC  949

seq1  CATGCACCCTCACACAATGATAATACATACTCTAAAATGCTGGGATTGGA  983
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCACCCTCACACAATGATAATACATACTCTAAAATGCTGGGATTGGA  999

seq1  GGCAATACCTGTAGTCCCCGTGGTGGGGCTGGGGAGACAGGAGCATCCCT  1033
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAATACCTGTAGTCCCCGTGGTGGGGCTGGGGAGACAGGAGCATCCCT  1049

seq1  GGGACTCACTGGCACCTAGTCTAGACTAATTAGTTAGTTACGGGCTCACG  1083
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACTCACTGGCACCTAGTCTAGACTAATTAGTTAGTTACGGGCTCACG  1099

seq1  AGAGATCATATTTCAATGGTGGACAGAATTC  1114
      |||||||||||||||||||||||||||||||
seq2  AGAGATCATATTTCAATGGTGGACAGAATTC  1130