BAC Information

Click to search

BAC

Clone NameB6Ng01-335B18
Chromosome17 (Build37)
Map Location 38,782,919 - 38,783,461
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr117, Olfr118, Olfr119, Scocp, Olfr120, Olfr1558-ps1, Olfr121, Olfr122, Olfr123, Olfr124, Olfr125, LOC672822, Olfr126, Olfr127, Olfr128, Ppia-ps17_697.1, Olfr761, Olfr1552-ps1, LOC100043265, Olfr129, Olfr130, Olfr131, Olfr132, Olfr133, Olfr134, Olfr135, Olfr138, Olfr137, Olfr762-ps1, Olfr136, LOC626985
Downstream geneLOC100043297, LOC100043300, EG668200
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-335B18.bB6Ng01-335B18.g
ACCGA120439GA120440
length1,2131,008
definitionB6Ng01-335B18.b B6Ng01-335B18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttacaagagcagcaagctacataaccataccatgtatgcaatgg
aacctgatcagacccatacatgctacattattggcagtttagttcccttg
ggttctaatatgcaatggatataatatcctcttagctctttcttgtggtg
cccttgacctatctggctcttaccaatgttcctcattattttgttgatgc
tccagattctaataaaaactcacctaactgtatcttcttagggtctatgc
atttctttcatcccttgctgtctgaatcatctctgatgactgtttggtct
agacactaaactgtgagtataccataataaattcagcaatcattcctttt
ttccagttatgtatagtctttcgcatatccagctttaggacctgcacgtg
gtgaaaaattcagcctcgctgtcatgtcatgcgtatcaagatgggcctgt
aattagtagaccacaataacaatttgtgtgccaagcatatcttgtggaca
tgaggagatgtagaagttgcaggtctgagatctactgtctgggtttcttg
tccaaatatctcaactagatgtcttgcctagttagttacaggagatgacc
atttcagattccatagcccattttgttatgaatgcttgctaaggtccctc
tcattgatttctggatgtttctgttatgctctgtttctagcttttcccag
agatagcacccacattccagttgtcttcacaagtaatctctccctccatc
atccataaccgcagatttttcatattgtcatccccactctctatattctt
gcagtccactctccccatgcacacatgatgtctattctgttttcaattct
aagtgagaattaatgttccctatttcagcactacatgtacttagccattt
ttgtatctggagatagcagtatgcttatcctttaccttatattatccact
tatatgggggtacatactatgtctgaaatcataggttgggattacttcaa
aggatcatctttctcttacttcccattcattgctttagaaattacatgat
ggtttattgttttttattactgaggtaatgctcctttgttatccatcttg
gtgaatatatggtcctagaccttgtccatgtttccactgtcaatgaccta
agcctgtctatgacaggtctcatcaggtggtcctgggttgatgtattagg
tgggctacgaggc
gaattctctcaaaacatgaatatgtttttcacaaagtacttgttccagaa
ggcagggattgtgaatactccagaatttcacatatttttctagattattc
aatctatcctgagtttcatagttttccacattatttagaaatcatatttc
aaagtctacaaagaattgtgttggtgttttgacaggaatgcctttgagtg
tgtagattgctattggtaggatggatattttcactattttacttacccat
gagcataggaattcttttcattttctaatatgttattcagttgctttttt
caaagtcttgaagtctttgtcatattgacctttctcttgctttcttagag
tgacaccaagacatttttatattatttctccaaattcttttactcatggt
gtttacagtgtgtataataaaaggctacataattcttttgtgataaactt
gaagctaaccactctgtggaaggtgtttaacttttgtagacattctatag
aagtaattaagtagtaagattttatacattatcaaatcatttgccacctg
caatatttttgtttatttcttttcaatttgtattcctttaatatccttaa
ttgtcttatttccctatcttgaacttctaggactatattatagagatagt
aagaaagtggatagtcctgttttgtctgtgaaattaggataattgctaca
aattcctatccatttaatttgatattaactattgacttgttgtatattaa
atttattatgtttagctatggcccttatttccctgatatctttggtatag
agtggaatgaagaattctgtttatgtatatattctgatagcctctgtctt
tttattgtggatttgagtccattaatgttaacagacattaattttgaaag
attattaatttcatttactttgatgctgtttgtgaatgtgtgtatttgtg
tgtgtctgtgcaagggttcaagtttctatttgtttcagttagtgtaaaat
tatttatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_38782919_38783461
seq2: B6Ng01-335B18.g_65_607

seq1  GAATTCTCTCAAAACATGAATATGTTTTTCACAAAGTACTTGTTCCAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCAAAACATGAATATGTTTTTCACAAAGTACTTGTTCCAGAA  50

seq1  GGCAGGGATTGTGAATACTCCAGAATTTCACATATTTTTCTAGATTATTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGGATTGTGAATACTCCAGAATTTCACATATTTTTCTAGATTATTC  100

seq1  AATCTATCCTGAGTTTCATAGTTTTCCACATTATTTAGAAATCATATTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTATCCTGAGTTTCATAGTTTTCCACATTATTTAGAAATCATATTTC  150

seq1  AAAGTCTACAAAGAATTGTGTTGGTGTTTTGACAGGAATGCCTTTGAGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCTACAAAGAATTGTGTTGGTGTTTTGACAGGAATGCCTTTGAGTG  200

seq1  TGTAGATTGCTATTGGTAGGATGGATATTTTCACTATTTTACTTACCCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGATTGCTATTGGTAGGATGGATATTTTCACTATTTTACTTACCCAT  250

seq1  GAGCATAGGAATTCTTTTCATTTTCTAATATGTTATTCAGTTGCTTTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCATAGGAATTCTTTTCATTTTCTAATATGTTATTCAGTTGCTTTTTT  300

seq1  CAAAGTCTTGAAGTCTTTGTCATATTGACCTTTCTCTTGCTTTCTTAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTCTTGAAGTCTTTGTCATATTGACCTTTCTCTTGCTTTCTTAGAG  350

seq1  TGACACCAAGACATTTTTATATTATTTCTCCAAATTCTTTTACTCATGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACACCAAGACATTTTTATATTATTTCTCCAAATTCTTTTACTCATGGT  400

seq1  GTTTACAGTGTGTATAATAAAAGGCTACATAATTCTTTTGTGATAAACTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTACAGTGTGTATAATAAAAGGCTACATAATTCTTTTGTGATAAACTT  450

seq1  GAAGCTAACCACTCTGTGGAAGGTGTTTAACTTTTGTAGACATTCTATAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCTAACCACTCTGTGGAAGGTGTTTAACTTTTGTAGACATTCTATAG  500

seq1  AAGTAATTAAGTAGTAAGATTTTATACATTATCAAATCATTTG  543
      |||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAATTAAGTAGTAAGATTTTATACATTATCAAATCATTTG  543