BAC Information

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BAC

Clone NameB6Ng01-336J19
Chromosome17 (Build37)
Map Location 39,231,841 - 39,233,025
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr132, Olfr133, Olfr134, Olfr135, Olfr138, Olfr137, Olfr762-ps1, Olfr136, LOC626985, LOC100043297
Downstream geneLOC100043300, EG668200, LOC672857, LOC627695
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-336J19.bB6Ng01-336J19.g
ACCGA121483GA121484
length1,2101,182
definitionB6Ng01-336J19.b B6Ng01-336J19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaacagaatgacccacaatccctcaattattttctagacccaca
ttcctattctatttctacacaccctcaccagcatttgttgtcacctgagg
ttttgatcttattcattctgattggtataaggcatttctgtgatcactaa
gaaatttgaacatttccttaggtgctcagtagccatttgagattactctg
ttgtgaactctcagtttagttctatacacatttttttaaattgggttgct
cattttttggtgactagcttagtaatttctttatatattttggatattag
ccctctatcagatgtgggtttcgtgaagattttttccatatctgtaagtt
acttatttgtcttattgactatgtcctttgccttatagaagtgtcccagt
ttcatcaggttccatttagcaattcttcatcttagagcataagccattgg
agttttgtttaggaaatttcaccctgtgctgatgcataggagttcaagac
tttttcccaatttctcttctattagattcagtttaactggttttatgttg
aggctcttgatccacttggacttgaactttgtgcaagtgacaaatattgg
tctatttttcatttttctacatacagacaggtagttaaaccagcatcatt
tattgatgatggtttctttctttcttttttttttttcattgagtattctt
ggcatctttgtccaacataaactctctgtaagtgtgtggttttatttctg
ggtcttcaatcttattacattaatcatcttgtctgtctctgtaccaatac
aatgcagtttttatcattatttctctgtagaaaagctagagaatggggat
ggtgattccctcagctgttcttttattgttaagaacagtttttgctatcc
tgggtttattttcctttccagaagaatttgagaattgctctttccaagtc
ttgtgttggaattttgataggattgcattgatatttaggtagtctttgat
aagatgggcatttttactgtgttaatctgcatcatgaaactggagatctc
tgcatttttctgagatcttcattttttttcatgaaagaacttggagtaat
tgtcatacctgtcctctcattctttggctagaattaccgttaatattcaa
attattggccatcggagagtggttcggacttccttttccagaggatgact
catctgttag
aattcaaattaataaataatttaattaaaaaattaattatttttgaagaa
tgtcaatgtaatctttattatcaggaaatattgtattactaaaaataaaa
tacaaaacataccatcaacaaagttcatattgtatgaacatttatttagc
aattaaattaacaaaatcatctgtaggcaacagtgcatggaagggtatat
ttatctcttgagattgaatagactttatatgataaaatttttctattggt
cctcacaatcagctttatttaaaataacattaatgtacacagaaggaatt
ttctgtcattgtatatcacattccatattgggaacattccgacagaagac
atctttcatatctgaacttaaatcttcatgcttttgaagtgatagttact
tcactaccattaatatattctttgattactggtatgtgcaatatatttgt
agcacatctccatttttaagagtccatttgccacttgtcaatggtaggaa
gtaacaagccagtttgaagagtgtaaacttacacacttataactatagcc
tccttaagtgctccaagactcccgaataatgttgtcaccttgagcatttg
gattttactactctcaagtagtgtggaatttcacaaagttgataggaaga
tctaagatcattatccattttaacttacccttccttcagtgagcattgct
gctagcagaatacttatggaaaacaacatgactgggacagaattcatgtc
tgaaagtaatcaaagaagatgtcttagttgaagcaaacagtgcatgggac
acaaagagtaaccaaaatactatttgaacttatgccctccaacacaagta
agtgtagcaagtactttcacagtcttataagtgaagagatgccatgtatt
gccacagtagtatgattgcgcaaaatttgtctccaattgagtgttatata
aggtaacataacctttatataagtgttatataaaggactttcctgaactc
ttagtggtatttgcaaagacagatcaatccttgtttctcctgcaccatgt
tgtaacaatgtgttcaaatataaatatgcaagaaataaattgcaatattt
gaccacttgttttccaaaggttacctattattgtatttgcctactctctt
atattgcttttcggtattccacatgaagcatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_39231841_39233025
seq2: B6Ng01-336J19.g_66_1247 (reverse)

seq1  GATGCTTCATGTGGAATACAGAAAAGCAAATAATAGAGAGTA-GCAAATA  49
      ||||||||||||||||||| ||||||| ||||  |||||||| |||||||
seq2  GATGCTTCATGTGGAATACCGAAAAGC-AATATAAGAGAGTAGGCAAATA  49

seq1  C-ATAATA-GTACCCTTT-GAAAACAAGT-GTCAAATATTTGCAATTTAT  95
      | |||||| ||| ||||| |||||||||| |||||||| |||||||||||
seq2  CAATAATAGGTAACCTTTGGAAAACAAGTGGTCAAATA-TTGCAATTTAT  98

seq1  TTCTTTGCATATTTATATTTTGAACACATTGTAACAAACAT-GTGCAGGA  144
      ||| ||||||||||||| |||||||||||||| || ||||| ||||||| 
seq2  TTC-TTGCATATTTATA-TTTGAACACATTGTTAC-AACATGGTGCAGG-  144

seq1  AGAAACAAGGATTTGATCTGTCTTTGCAAATACCACTAAGAGTTCAGGAA  194
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  AGAAACAAGGA-TTGATCTGTCTTTGCAAATACCACTAAGAGTTCAGGAA  193

seq1  AGTCCTTTATATAACACCTTATATAAAGGTTATGTTACCTTATATAACAC  244
      |||||||||||||||| |||||||||||||||||||||||||||||||| 
seq2  AGTCCTTTATATAACA-CTTATATAAAGGTTATGTTACCTTATATAACA-  241

seq1  CTCAATTGGAGACAAATTTTGCGCAATCATACTACTGTGGCAATACATGG  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAATTGGAGACAAATTTTGCGCAATCATACTACTGTGGCAATACATGG  291

seq1  CATCTCTTCACTTATAAGACTGTGAAAGTACTTGCTACACTTACTTGTGT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCTTCACTTATAAGACTGTGAAAGTACTTGCTACACTTACTTGTGT  341

seq1  TGGAGGGCATAAGTTCAAATAGTATTTTGGTTACTCTTTGTGTCCCATGC  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGGCATAAGTTCAAATAGTATTTTGGTTACTCTTTGTGTCCCATGC  391

seq1  ACTGTTTGCTTCAACTAAGACATCTTCTTTGATTACTTTCAGACATGAAT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTTGCTTCAACTAAGACATCTTCTTTGATTACTTTCAGACATGAAT  441

seq1  TCTGTCCCAGTCATGTTGTTTTCCATAAGTATTCTGCTAGCAGCAATGCT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCCCAGTCATGTTGTTTTCCATAAGTATTCTGCTAGCAGCAATGCT  491

seq1  CACTGAAGGAAGGGTAAGTTAAAATGGATAATGATCTTAGATCTTCCTAT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGAAGGAAGGGTAAGTTAAAATGGATAATGATCTTAGATCTTCCTAT  541

seq1  CAACTTTGTGAAATTCCACACTACTTGAGAGTAGTAAAATCCAAATGCTC  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTTGTGAAATTCCACACTACTTGAGAGTAGTAAAATCCAAATGCTC  591

seq1  AAGGTGACAACATTATTCGGGAGTCTTGGAGCACTTAAGGAGGCTATAGT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTGACAACATTATTCGGGAGTCTTGGAGCACTTAAGGAGGCTATAGT  641

seq1  TATAAGTGTGTAAGTTTACACTCTTCAAACTGGCTTGTTACTTCCTACCA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGTGTGTAAGTTTACACTCTTCAAACTGGCTTGTTACTTCCTACCA  691

seq1  TTGACAAGTGGCAAATGGACTCTTAAAAATGGAGATGTGCTACAAATATA  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACAAGTGGCAAATGGACTCTTAAAAATGGAGATGTGCTACAAATATA  741

seq1  TTGCACATACCAGTAATCAAAGAATATATTAATGGTAGTGAAGTAACTAT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCACATACCAGTAATCAAAGAATATATTAATGGTAGTGAAGTAACTAT  791

seq1  CACTTCAAAAGCATGAAGATTTAAGTTCAGATATGAAAGATGTCTTCTGT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCAAAAGCATGAAGATTTAAGTTCAGATATGAAAGATGTCTTCTGT  841

seq1  CGGAATGTTCCCAATATGGAATGTGATATACAATGACAGAAAATTCCTTC  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAATGTTCCCAATATGGAATGTGATATACAATGACAGAAAATTCCTTC  891

seq1  TGTGTACATTAATGTTATTTTAAATAAAGCTGATTGTGAGGACCAATAGA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTACATTAATGTTATTTTAAATAAAGCTGATTGTGAGGACCAATAGA  941

seq1  AAAATTTTATCATATAAAGTCTATTCAATCTCAAGAGATAAATATACCCT  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTTTATCATATAAAGTCTATTCAATCTCAAGAGATAAATATACCCT  991

seq1  TCCATGCACTGTTGCCTACAGATGATTTTGTTAATTTAATTGCTAAATAA  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATGCACTGTTGCCTACAGATGATTTTGTTAATTTAATTGCTAAATAA  1041

seq1  ATGTTCATACAATATGAACTTTGTTGATGGTATGTTTTGTATTTTATTTT  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCATACAATATGAACTTTGTTGATGGTATGTTTTGTATTTTATTTT  1091

seq1  TAGTAATACAATATTTCCTGATAATAAAGATTACATTGACATTCTTCAAA  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAATACAATATTTCCTGATAATAAAGATTACATTGACATTCTTCAAA  1141

seq1  AATAATTAATTTTTTAATTAAATTATTTATTAATTTGAATT  1185
      |||||||||||||||||||||||||||||||||||||||||
seq2  AATAATTAATTTTTTAATTAAATTATTTATTAATTTGAATT  1182