BAC Information

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BAC

Clone NameB6Ng01-341O06
Chromosome17 (Build37)
Map Location 38,999,758 - 39,130,757
singlet/doubletdoublet
Overlap geneLOC100043297
Upstream geneOlfr127, Olfr128, Ppia-ps17_697.1, Olfr761, Olfr1552-ps1, LOC100043265, Olfr129, Olfr130, Olfr131, Olfr132, Olfr133, Olfr134, Olfr135, Olfr138, Olfr137, Olfr762-ps1, Olfr136, LOC626985
Downstream geneLOC100043300, EG668200, LOC672857, LOC627695
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-341O06.bB6Ng01-341O06.g
ACCGA125146GA125147
length9231,077
definitionB6Ng01-341O06.b B6Ng01-341O06.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(38,999,758 - 39,000,667)(39,129,667 - 39,130,757)
sequence
gaattccaccaccaaaatcaggtttagcaagtcaagtgaaacaaaccctt
cctggcttctgcatcagctcctgcttgtaattttctttttgttttactaa
tatcacattatatacatgtaccacctttttttaaaaaaaatagtattcag
ctgatggaaagtcagcctaattctctttcctcattattatgaacacaaaa
gaaataaacatggttcttcacatattgatacaaagaaatactggaaccct
tggaaaaataaacagaagactttgtattaaattacgttataaaatttgca
agcaaatggaatgaacttgagttaagtatcctgaatgaggtttttcaggc
acagacatacaaatacaaacgttctctctgatgtgttgtgataaattcat
atactatgtgtgtaaattagagaaatgtgaagaaagccagtttactacaa
atgttatgttgggagggtatttattagtaaaggttggatactagaatata
cataaaatgaatttggaaagtgccacatcagtgcagaaaactacaaaagg
aaaaatgcagcaaagaatatgggaagaaaaggggccattttagatgcaga
gtggataaaaatgatatggaaaaccttgccttcagtaaaagtaacaatta
gtaggtttagaacacacatgatctgaaataatacagcttgtaacagggat
taattatttaagaattgtttgggttcaagaagatggagaagagctgtggt
agacatggaaattaagcaaactgacaatatatggattgctaaataattcc
tatgaatatgtactatttttttaagtaaatatatacacatgggggagaga
gagagagagaaagagagagaagtaatagttgagtatattaattcggtgaa
tagaatgcccctgctgagacttc
gaattcttagtaagcaataaattctgattttgtacacagatgagttcacc
tgttctactggttcaatattcaaataaaatttggttttcttcttcactaa
tactctagaagcaaattcatctcagaaaatacagaaatacacagcagtgt
cattaactaacctcctggttataattctatgatgccattcttctaaatga
aggtattaaacgcattaaattatttcaatcaaagaattagatacagtact
attgattctattgaacaggaaaagctaagagaattaaagataatgctgaa
taaaagcctatgtagttgaagtgaataaaatattttttgagattttcaaa
caaatttaaataatgaaaacggtagtacttaagtggttattattgctttt
tgtaaacaatttaaatttggaagtgtaaatgaagacactgtatttgactc
attttctccaaattatatttccatccaaataccttccttttcttcaaatc
gttcgttgaacttaatgtaataaattatggcatattgcagatcactatga
acaacttatatatgcatttatttgtaaactttcaggcacaaaaatcattg
cattgggtgtcattatgatagttaaaccctggcaaagaaaactgaatttc
taactaaggaactgtatgtttagagcattcattgttttctttcttgttta
taaagatgcactgttatttgtagcaagccataaggaataattttctgctt
aaaatacagaaccatctgaaagacccaacaagcagctgaagtgtcagatg
cagatattcgcacccaaccaatggacagaagtagctgacctctcttgttt
aattagggaagattgagagaaactgaggaaaagagtgatactgcaggagg
atcaaaagtctcaattaatctggatccacgagagctctcaatatggccac
caaaatgcagtctacaccagctgatatgaagccccacacacatacagtag
aggactccaggtctgtgttcattcagagacctatctcaagagatgagctc
agggagtttagagtccagtgcggaggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_38999758_39000667
seq2: B6Ng01-341O06.b_48_970

seq1  GAATTCCACCACCAAAATCAGGTTTAGCAAGTCAAGTGAAACAAACCCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACCACCAAAATCAGGTTTAGCAAGTCAAGTGAAACAAACCCTT  50

seq1  CCTGGCTTCTGCATCAGCTCCTGCTTGTAATTTTCTTTTTGTTTTACTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCTTCTGCATCAGCTCCTGCTTGTAATTTTCTTTTTGTTTTACTAA  100

seq1  TATCACATTATATACATGTACCACCTTTTTTTAAAAAAAATAGTATTCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCACATTATATACATGTACCACCTTTTTTTAAAAAAAATAGTATTCAG  150

seq1  CTGATGGAAAGTCAGCCTAATTCTCTTTCCTCATTATTATGAACACAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATGGAAAGTCAGCCTAATTCTCTTTCCTCATTATTATGAACACAAAA  200

seq1  GAAATAAACATGGTTCTTCACATATTGATACAAAGAAATACTGGAACCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAAACATGGTTCTTCACATATTGATACAAAGAAATACTGGAACCCT  250

seq1  TGGAAAAATAAACAGAAGACTTTGTATTAAATTACGTTATAAAATTTGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAAATAAACAGAAGACTTTGTATTAAATTACGTTATAAAATTTGCA  300

seq1  AGCAAATGGAATGAACTTGAGTTAAGTATCCTGAATGAGGTTTTTCAGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAATGGAATGAACTTGAGTTAAGTATCCTGAATGAGGTTTTTCAGGC  350

seq1  ACAGACATACAAATACAAACGTTCTCTCTGATGTGTTGTGATAAATTCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACATACAAATACAAACGTTCTCTCTGATGTGTTGTGATAAATTCAT  400

seq1  ATACTATGTGTGTAAATTAGAGAAATGTGAAGAAAGCCAGTTTACTACAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTATGTGTGTAAATTAGAGAAATGTGAAGAAAGCCAGTTTACTACAA  450

seq1  ATGTTATGTTGGGAGGGTATTTATTAGTAAAGGTTGGATACTAGAATATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTATGTTGGGAGGGTATTTATTAGTAAAGGTTGGATACTAGAATATA  500

seq1  CATAAAATGAATTTGGAAAGTGCCACATCAGTGCAGAAAACTACAAAAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAAATGAATTTGGAAAGTGCCACATCAGTGCAGAAAACTACAAAAGG  550

seq1  AAAAATGCAGCAAAGAA-ATGGGAAGAAAAGGGGCCA-TTTAGATGCAGA  598
      ||||||||||||||||| ||||||||||||||||||| ||||||||||||
seq2  AAAAATGCAGCAAAGAATATGGGAAGAAAAGGGGCCATTTTAGATGCAGA  600

seq1  GTGGATAAAAATGATATGGAAAACCTTGCCTTCAGTAAAAGTAACAATTA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGATAAAAATGATATGGAAAACCTTGCCTTCAGTAAAAGTAACAATTA  650

seq1  GTAGGTTTAGAACACACATGATCTGAAATAATACAGCTTGTAACAGGGAT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGTTTAGAACACACATGATCTGAAATAATACAGCTTGTAACAGGGAT  700

seq1  TAATTATTTAAGAATTGTTT-GGTTCAAGAAGATGGAGAAGAGCTGTGGT  747
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TAATTATTTAAGAATTGTTTGGGTTCAAGAAGATGGAGAAGAGCTGTGGT  750

seq1  AGACATGG-AATTAAGCAAACTGACAATATATGGATTGCTAAATAA-TCC  795
      |||||||| ||||||||||||||||||||||||||||||||||||| |||
seq2  AGACATGGAAATTAAGCAAACTGACAATATATGGATTGCTAAATAATTCC  800

seq1  TATGAATATGTACTA-TTTTTTAAGTAAATATATACACAT-GGGGAGAGA  843
      ||||||||||||||| |||||||||||||||||||||||| |||||||||
seq2  TATGAATATGTACTATTTTTTTAAGTAAATATATACACATGGGGGAGAGA  850

seq1  GAGAGAGAGAAAGAGAGAG-AGTAATAG-TGAGTATATTAAT--CGTGAA  889
      ||||||||||||||||||| |||||||| |||||||||||||   |||||
seq2  GAGAGAGAGAAAGAGAGAGAAGTAATAGTTGAGTATATTAATTCGGTGAA  900

seq1  TAG-ATG-CCCTGCAGAGACTTC  910
      ||| ||| |||||| ||||||||
seq2  TAGAATGCCCCTGCTGAGACTTC  923

seq1: chr17_39129667_39130757
seq2: B6Ng01-341O06.g_68_1144 (reverse)

seq1  CCCTCCGCACCTGAACTCTAAACTCCCTGGAGCCTCCAATCTCTTGAGGA  50
      ||||||||| ||| |||||||||||||| ||| |||  ||||||||||  
seq2  CCCTCCGCA-CTGGACTCTAAACTCCCT-GAG-CTC--ATCTCTTGAG--  43

seq1  TTAGGTCTCTGAATGAACACAGACCTGGAAGTCCTCTACTGTATGTGTGT  100
       ||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  ATAGGTCTCTGAATGAACACAGACCTGG-AGTCCTCTACTGTATGTGTGT  92

seq1  TGGGGGCTTCATATCAGCTGGTGTAGACTGCATTTTTGGTGGGCCATTAT  150
        |||||||||||||||||||||||||||||| ||||||| ||||||   
seq2  --GGGGCTTCATATCAGCTGGTGTAGACTGCA-TTTTGGT-GGCCAT--A  136

seq1  TTGAGAGCTCTCGTGGATCCAGATTAATTGAGACTTTTGATCCTCCTGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGAGCTCTCGTGGATCCAGATTAATTGAGACTTTTGATCCTCCTGCA  186

seq1  GTATCACTCTTTTCCTCAGTTTCTCTCAATCTTCCCTAATTAAACAAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCACTCTTTTCCTCAGTTTCTCTCAATCTTCCCTAATTAAACAAGAG  236

seq1  AGGTCAGCTACTTCTGTCCATTGGTTGGGTGCGAATATCTGCATCTGACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCAGCTACTTCTGTCCATTGGTTGGGTGCGAATATCTGCATCTGACA  286

seq1  CTTCAGCTGCTTGTTGGGTCTTTCAGATGGTTCTGTATTTTAAGCAGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGCTGCTTGTTGGGTCTTTCAGATGGTTCTGTATTTTAAGCAGAAA  336

seq1  ATTATTCCTTATGGCTTGCTACAAATAACAGTGCATCTTTATAAACAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTCCTTATGGCTTGCTACAAATAACAGTGCATCTTTATAAACAAGA  386

seq1  AAGAAAACAATGAATGCTCTAAACATACAGTTCCTTAGTTAGAAATTCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAACAATGAATGCTCTAAACATACAGTTCCTTAGTTAGAAATTCAG  436

seq1  TTTTCTTTGCCAGGGTTTAACTATCATAATGACACCCAATGCAATGATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTGCCAGGGTTTAACTATCATAATGACACCCAATGCAATGATTT  486

seq1  TTGTGCCTGAAAGTTTACAAATAAATGCATATATAAGTTGTTCATAGTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGCCTGAAAGTTTACAAATAAATGCATATATAAGTTGTTCATAGTGA  536

seq1  TCTGCAATATGCCATAATTTATTACATTAAGTTCAACGAACGATTTGAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCAATATGCCATAATTTATTACATTAAGTTCAACGAACGATTTGAAG  586

seq1  AAAAGGAAGGTATTTGGATGGAAATATAATTTGGAGAAAATGAGTCAAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGAAGGTATTTGGATGGAAATATAATTTGGAGAAAATGAGTCAAAT  636

seq1  ACAGTGTCTTCATTTACACTTCCAAATTTAAATTGTTTACAAAAAGCAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGTCTTCATTTACACTTCCAAATTTAAATTGTTTACAAAAAGCAAT  686

seq1  AATAACCACTTAAGTACTACCGTTTTCATTATTTAAATTTGTTTGAAAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACCACTTAAGTACTACCGTTTTCATTATTTAAATTTGTTTGAAAAT  736

seq1  CTCAAAAAATATTTTATTCACTTCAACTACATAGGCTTTTATTCAGCATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAAAAATATTTTATTCACTTCAACTACATAGGCTTTTATTCAGCATT  786

seq1  ATCTTTAATTCTCTTAGCTTTTCCTGTTCAATAGAATCAATAGTACTGTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTAATTCTCTTAGCTTTTCCTGTTCAATAGAATCAATAGTACTGTA  836

seq1  TCTAATTCTTTGATTGAAATAATTTAATGCGTTTAATACCTTCATTTAGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAATTCTTTGATTGAAATAATTTAATGCGTTTAATACCTTCATTTAGA  886

seq1  AGAATGGCATCATAGAATTATAACCAGGAGGTTAGTTAATGACACTGCTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGGCATCATAGAATTATAACCAGGAGGTTAGTTAATGACACTGCTG  936

seq1  TGTATTTCTGTATTTTCTGAGATGAATTTGCTTCTAGAGTATTAGTGAAG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTTCTGTATTTTCTGAGATGAATTTGCTTCTAGAGTATTAGTGAAG  986

seq1  AAGAAAACCAAATTTTATTTGAATATTGAACCAGTAGAACAGGTGAACTC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAACCAAATTTTATTTGAATATTGAACCAGTAGAACAGGTGAACTC  1036

seq1  ATCTGTGTACAAAATCAGAATTTATTGCTTACTAAGAATTC  1091
      |||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTGTACAAAATCAGAATTTATTGCTTACTAAGAATTC  1077