BAC Information

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BAC

Clone NameB6Ng01-342P16
Chromosome17 (Build37)
Map Location 63,947,991 - 64,030,214
singlet/doubletdoublet
Overlap geneLOC638867
Upstream geneEfna5, Fbxl17, Ppia-ps17_1026.1
Downstream geneLOC668677, A930002H24Rik, Fert2, LOC669778, Pja2, LOC100043582, Man2a1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-342P16.bB6Ng01-342P16.g
ACCGA125891GA125892
length464990
definitionB6Ng01-342P16.b B6Ng01-342P16.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(63,947,991 - 63,948,453)(64,029,233 - 64,030,214)
sequence
cattaaggttccagaatggcttaaaatggagttagagaaagtagccatat
tcagtggaatttactctttaaatgtaaaacagcagcagcagcagcagcag
cagcagcagcagcaacaacaacaacaacaacaacaacaacaacacaccct
tttttggtccatagagaaaagaaacctttctttctcagccagaagaattt
tgataatgacaaaagtatgtccagctggtcacatgtgaaaacctaccatg
tgctcagtgtggtaagtgacctcagtatcattaggtgtccgattaggcaa
ggccctgggaggacctgacaatccatgagatagggcctatgtgtttatac
actgcttaaggagacataattttaaatatgtatatttaaataggtatata
tatatatatatatatatatatatatatatatatatacatatatatatgta
tatatatatatata
gaattcatagtgatttcatttagaggtccaacttcttgtcaaggcttaga
caagctcgtttttcctccattactctattttctacagagtaattgggctg
taaatatggtgggccaaggctctgagtatttgccgagatataaagtgcta
tcagctactttcttgctctggaaaccagtgatgcactgtgtctcttgcat
cttattggctaacacagcaacaggctcagaaggaacaagaacaggtctca
cctttgaaaagggaaggatgtgaagaatctgtggccatctctaactggct
ggaccagattcagaacagaaaaagaaaaaaactgatgaagaacactggac
ttttcaaaagtgaaaacggcaatgtccatgtaggtaagagatgaagggag
aggggccactgcaagataaacgcagaactgaaagggccctgattctgtgg
gtctgaggaagccaaaagatttaaagttacaaggttatataactttaata
gtttatcaaatatagtattttttatatacttacatacttaatatattacc
tatgtacttatgtttaataatatattaaatataacatgtaatattatata
cttatatttaatagtatatttgatatagtgtatataatatacttatatgt
aatgatattgctaaatatagtgtatttaataagctattaaataaactgtt
aaatataccatatttaatcatttattaactagtatagcacaaccatgcta
ggcaatgcaaaaagaaaactgtagtaggctaatattttcagagtgaagaa
agggaccaaactgatgaaatagtaaatattcccacctggttttcaaaatt
gaatttctgaagtccatttcatccaaagtgagaatcaggttatttagagc
aagcaaaattgcagtgttccttgatcctcaggtttatgtgaccatctcct
cctcagagttttagccaatctctctcccttcctctcccct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_63947991_63948453
seq2: B6Ng01-342P16.b_48_506

seq1  GAATTCCATTAAGGTTCCAGAATGGCTTAAAATGGAGTTAGAGAAAGTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATTAAGGTTCCAGAATGGCTTAAAATGGAGTTAGAGAAAGTAG  50

seq1  CCATATTCAGTGGAATTTACTCTTTAAATGTAAAACAGCAGCAGCAGCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATATTCAGTGGAATTTACTCTTTAAATGTAAAACAGCAGCAGCAGCAG  100

seq1  CAGCAGCAGCAGCAGCAGCAACAACAACAACAACAACAACAACAACAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGCAGCAGCAGCAGCAACAACAACAACAACAACAACAACAACAACA  150

seq1  CACCCTTTTTTGGTCCATAGAGAAAAGAAACCTTTCTTTCTCAGCCAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCTTTTTTGGTCCATAGAGAAAAGAAACCTTTCTTTCTCAGCCAGAA  200

seq1  GAATTTTGATAATGACAAAAGTATGTCCAGCTGGTCACATGTGAAAACCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTTGATAATGACAAAAGTATGTCCAGCTGGTCACATGTGAAAACCT  250

seq1  ACCATGTGCTCAGTGTGGTAAGTGACCTCAGTATCATTAGGTGTCCGATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGTGCTCAGTGTGGTAAGTGACCTCAGTATCATTAGGTGTCCGATT  300

seq1  AGGCAAGGCCCTGGGAGGACCTGACAATCCATGAGATAGGGCCTATGTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAAGGCCCTGGGAGGACCTGACAATCCATGAGATAGGGCCTATGTGT  350

seq1  TTATACACTGCTTAAGGAGACATAATTTTAAATATGTATATTTAAATAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATACACTGCTTAAGGAGACATAATTTTAAATATGTATATTTAAATAGG  400

seq1  TATATATATATATATATATATATATATATATATATATATATACATGCATG  450
      ||||||||||||||||||||||||||||||||||||||||||    ||| 
seq2  TATATATATATATATATATATATATATATATATATATATATA----CATA  446

seq1  TGTGTATGTATAT  463
      | | |||||||||
seq2  TATATATGTATAT  459

seq1: chr17_64029233_64030214
seq2: B6Ng01-342P16.g_67_1056 (reverse)

seq1  ----------AGGGGAGAGAGATTTGGCTAAAACTCTGAGGAGGAGATGG  40
                | |||||||||| |||||||||||||||||||||||||||
seq2  AGGGGAGAGGAAGGGAGAGAGA-TTGGCTAAAACTCTGAGGAGGAGATGG  49

seq1  TCACATAAACCTGAGGATCAAGGAACACTGCAAATTTTGCTTGCTCTAAA  90
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TCACATAAACCTGAGGATCAAGGAACACTGC-AATTTTGCTTGCTCTAAA  98

seq1  TAACCTGATTCTCACTTTTGGATGAAATGGACTTCAGAAATTCAATTTTG  140
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TAACCTGATTCTCAC-TTTGGATGAAATGGACTTCAGAAATTCAATTTTG  147

seq1  AAAACCAGGTGGGAATATTTACTATTTCATCAGTTTGGT-CCTTTCTTCA  189
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  AAAACCAGGTGGGAATATTTACTATTTCATCAGTTTGGTCCCTTTCTTCA  197

seq1  CTCTGAAAATATTAGCCTACTACAGTTTTCTTTTTGCATTGCCTAGCATG  239
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAAAATATTAGCCTACTACAGTTTTCTTTTTGCATTGCCTAGCATG  247

seq1  GTTGTGCTATACTAGTTAATAAATGATTAAATATGGTATATTTAACAGTT  289
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTGCTATACTAGTTAATAAATGATTAAATATGGTATATTTAACAGTT  297

seq1  TATTTAATAGCTTATTAAATACACTATATTTAGCAATATCATTACATATA  339
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTAATAGCTTATTAAATACACTATATTTAGCAATATCATTACATATA  347

seq1  AGTATATTATATACACTATATCAAATATACTATTAAATATAAGTATATAA  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATATTATATACACTATATCAAATATACTATTAAATATAAGTATATAA  397

seq1  TATTACATGTTATATTTAATATATTATTAAACATAAGTACATAGGTAATA  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTACATGTTATATTTAATATATTATTAAACATAAGTACATAGGTAATA  447

seq1  TATTAAGTATGTAAGTATATAAAAAATACTATATTTGATAAACTATTAAA  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAGTATGTAAGTATATAAAAAATACTATATTTGATAAACTATTAAA  497

seq1  GTTATATAACCTTGTAACTTTAAATCTTTTGGCTTCCTCAGACCCACAGA  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATATAACCTTGTAACTTTAAATCTTTTGGCTTCCTCAGACCCACAGA  547

seq1  ATCAGGGCCCTTTCAGTTCTGCGTTTATCTTGCAGTGGCCCCTCTCCCTT  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGGGCCCTTTCAGTTCTGCGTTTATCTTGCAGTGGCCCCTCTCCCTT  597

seq1  CATCTCTTACCTACATGGACATTGCCGTTTTCACTTTTGAAAAGTCCAGT  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCTTACCTACATGGACATTGCCGTTTTCACTTTTGAAAAGTCCAGT  647

seq1  GTTCTTCATCAGTTTTTTTCTTTTTCTGTTCTGAATCTGGTCCAGCCAGT  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTCATCAGTTTTTTTCTTTTTCTGTTCTGAATCTGGTCCAGCCAGT  697

seq1  TAGAGATGGCCACAGATTCTTCACATCCTTCCCTTTTCAAAGGTGAGACC  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGATGGCCACAGATTCTTCACATCCTTCCCTTTTCAAAGGTGAGACC  747

seq1  TGTTCTTGTTCCTTCTGAGCCTGTTGCTGTGTTAGCCAATAAGATGCAAG  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTTGTTCCTTCTGAGCCTGTTGCTGTGTTAGCCAATAAGATGCAAG  797

seq1  AGACACAGTGCATCACTGGTTTCCAGAGCAAGAAAGTAGCTGATAGCACT  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACAGTGCATCACTGGTTTCCAGAGCAAGAAAGTAGCTGATAGCACT  847

seq1  TTATATCTCGGCAAATACTCAGAGCCTTGGCCCACCATATTTACAGCCCA  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATCTCGGCAAATACTCAGAGCCTTGGCCCACCATATTTACAGCCCA  897

seq1  ATTACTCTGTAGAAAATAGAGTAATGGAGGAAAAACGAGCTTGTCTAAGC  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTCTGTAGAAAATAGAGTAATGGAGGAAAAACGAGCTTGTCTAAGC  947

seq1  CTTGACAAGAAGTTGGACCTCTAAATGAAATCACTATGAATTC  982
      |||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGACAAGAAGTTGGACCTCTAAATGAAATCACTATGAATTC  990