BAC Information

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BAC

Clone NameB6Ng01-350L08
Chromosome17 (Build37)
Map Location 22,101,295 - 22,203,091
singlet/doubletdoublet
Overlap gene4930432O21Rik, LOC665820, LOC665825, LOC674332, LOC631010
Upstream genePpp2r1a, V1rf5, Zfp160, LOC627912, LOC435509, EG627924, 4933430A09, EG665654, EG665662, LOC665666, EG665669, V1rf1, V1rf2, V1rf4, V1rf3, A830058L05Rik, Zfp54, Zfp51, Zfp53, LOC100042508, Zfp52, BC049807, Zfp760, BC043476, 4930515G13Rik, 2610036F08Rik, LOC624960, 3110048L19Rik
Downstream geneEG665844, EG210853, LOC671007, EG240038, EG631624, 6330416L07Rik, Zfp758, 1300003B13Rik, EG210876, LOC100042656, EG628185, ENSMUSG00000046088, EG383218, EG433078, LOC100042679, A630033E08Rik, LOC671128, LOC665961, EG434701, LOC665976, LOC100042225
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-350L08.bB6Ng01-350L08.g
ACCGA131302GA131303
length7881,103
definitionB6Ng01-350L08.b B6Ng01-350L08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(22,202,304 - 22,203,091)(22,101,295 - 22,102,408)
sequence
gaattctaccttcagaaaaaaagtatccatgggcaaaactacagaccatt
gtcaagtcctcctctcctattgcactttaactctcagttctatatgcatc
aagtaatgaattagatttgagtttattttgttaagtattttccagaatgc
taataccatacacacaccagaacattaatcctgaaacaaaaccgaattac
tggcattactcatgtagtatcttcatcttaatttcagatgtgagtccatt
tctatgaatactatgaaaccatgaaggtttaaagaggtaacctatgaaca
atagatgagatacatgttgaagtaaagtttaagaacccccaaagtgtcct
ggaaattcattttgaagagctaaaagaaagaagagaaagtctttatgcca
agccaaaataatcttaaaatattgataatgaattcagactacaaatggat
ggaaccagaaaatatcctgtgtgatataacacagtcccaaaatgacatgc
ttgctatatactcagtgataagtgaatactagccatcaagtacagaatac
ccatgatatatttcacagactcaaagaagttaaacaagaaagaaggtcta
agcaagaatattttaatatatcttagaagggggaataaaatagtcatagg
agggagagagagggaagaaactgcttgagagaggggatggggaggagaat
ggagagtcagaattaggtgtgaggagagtctagagagagttccatgagaa
tgaatgtaattttgtacttgctggaggtggggaggttg
gggtactgtaagccatgctcctgggaggcagctgtaattggattaatcca
gagggtcctcaaagttctgcttcttaagtctgtgggacttcgtacacgaa
ggctctggtcaccgccctgactgccagcaggtagcagtgattcttccttc
ccctaaaatcttaaaatgtagagcatgtttcagcacctcctatacctgcc
aatagcgaccagtgaggcggttccgcagccacagccacgtcataaggaat
accatgatgggctcccgaatcctgaggacgcatcatttatttttgtacca
tgaaaagttctgaatgctttcttatgaatctttcccatatgcaggggccc
cctgcccagtcagtgctacttacctgtgaatctgagagccctggatggtg
aagagaggaaagagtagcaaaggatcctgtatgttagagggaatgaggaa
cgattgggaggggcttcaagtcccagtagaaaggggacatgagattggtt
tggccagattctatttccttccaaatagttctggatatttgcaccatgaa
taacatcagaatattcccattgtaagtagtagaagactatgtaagaatta
atatacagaggcaaatataatttaatttggttttgtatgtgaagaatgct
gtttcttttccattcatatcttcttattataattatgtttgtcagaacaa
tggatgcctcttagtttttcttgatattagagttttggagcattttgtat
ttcctttaggttctcttgtcttttatggttaatttctccatttcctaaaa
caatgccagctcaattttgataacatttgattaatatttctgcataatat
taaacctatctatattacctttccattgatatctgctgttgtctgtcttc
ttgtcaactgtcaatattttgctaataattttaatatattttgaaatcac
ccatgattttgattcttctctaatttttaaagtctaatggtttcacattc
catgaatgtgcttggaatatagaaaatattctctatttatatttcaaatg
gtctgtaggatttgtatcaatctaaatcatctttatattccttcacatga
tta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_22202304_22203091
seq2: B6Ng01-350L08.b_47_834 (reverse)

seq1  CAACCTCCCCACCTCCAGCAAGTGCAGATTTCCATTCATTCTCCTGGTAC  50
      ||||||||||||||||||||||| || | || ||||||||||| ||| ||
seq2  CAACCTCCCCACCTCCAGCAAGTACAAAATTACATTCATTCTCATGGAAC  50

seq1  TCTCTCTAGACTCTCCTCACACCTAATTCTGACTCTCCATTCTCCTCCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTAGACTCTCCTCACACCTAATTCTGACTCTCCATTCTCCTCCCC  100

seq1  ATCCCCTCTCTCAAGCAGTTTCTTCCCTCTCTCTCCCTCCTATGACTATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCCTCTCTCAAGCAGTTTCTTCCCTCTCTCTCCCTCCTATGACTATT  150

seq1  TTATTCCCCCTTCTAAGATATATTAAAATATTCTTGCTTAGACCTTCTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCCCCCTTCTAAGATATATTAAAATATTCTTGCTTAGACCTTCTTT  200

seq1  CTTGTTTAACTTCTTTGAGTCTGTGAAATATATCATGGGTATTCTGTACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTTAACTTCTTTGAGTCTGTGAAATATATCATGGGTATTCTGTACT  250

seq1  TGATGGCTAGTATTCACTTATCACTGAGTATATAGCAAGCATGTCATTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGGCTAGTATTCACTTATCACTGAGTATATAGCAAGCATGTCATTTT  300

seq1  GGGACTGTGTTATATCACACAGGATATTTTCTGGTTCCATCCATTTGTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACTGTGTTATATCACACAGGATATTTTCTGGTTCCATCCATTTGTAG  350

seq1  TCTGAATTCATTATCAATATTTTAAGATTATTTTGGCTTGGCATAAAGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAATTCATTATCAATATTTTAAGATTATTTTGGCTTGGCATAAAGAC  400

seq1  TTTCTCTTCTTTCTTTTAGCTCTTCAAAATGAATTTCCAGGACACTTTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTTCTTTCTTTTAGCTCTTCAAAATGAATTTCCAGGACACTTTGG  450

seq1  GGGTTCTTAAACTTTACTTCAACATGTATCTCATCTATTGTTCATAGGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTCTTAAACTTTACTTCAACATGTATCTCATCTATTGTTCATAGGTT  500

seq1  ACCTCTTTAAACCTTCATGGTTTCATAGTATTCATAGAAATGGACTCACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCTTTAAACCTTCATGGTTTCATAGTATTCATAGAAATGGACTCACA  550

seq1  TCTGAAATTAAGATGAAGATACTACATGAGTAATGCCAGTAATTCGGTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAATTAAGATGAAGATACTACATGAGTAATGCCAGTAATTCGGTTT  600

seq1  TGTTTCAGGATTAATGTTCTGGTGTGTGTATGGTATTAGCATTCTGGAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCAGGATTAATGTTCTGGTGTGTGTATGGTATTAGCATTCTGGAAA  650

seq1  ATACTTAACAAAATAAACTCAAATCTAATTCATTACTTGATGCATATAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTAACAAAATAAACTCAAATCTAATTCATTACTTGATGCATATAGA  700

seq1  ACTGAGAGTTAAAGTGCAATAGGAGAGGAGGACTTGACAATGGTCTGTAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGAGTTAAAGTGCAATAGGAGAGGAGGACTTGACAATGGTCTGTAG  750

seq1  TTTTGCCCATGGATACTTTTTTTCTGAAGGTAGAATTC  788
      ||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCCCATGGATACTTTTTTTCTGAAGGTAGAATTC  788

seq1: chr17_22101295_22102408
seq2: B6Ng01-350L08.g_75_1177

seq1  GGGTACTGTAAGCCATGCTCCTGGGAGGCAGCTGTAATTGGATTAATCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTACTGTAAGCCATGCTCCTGGGAGGCAGCTGTAATTGGATTAATCCA  50

seq1  GAGGGTCCTCAAAGTTCTGCTTCTTAAGTCTGTGGGACTTCGTACACGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGTCCTCAAAGTTCTGCTTCTTAAGTCTGTGGGACTTCGTACACGAA  100

seq1  GGCTCTGGTCACCGCCCTGACTGCCAGCAGGTAGCAGTGATTCTTCCTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCTGGTCACCGCCCTGACTGCCAGCAGGTAGCAGTGATTCTTCCTTC  150

seq1  CCCTAAAATCTTAAAATGTAGAGCATGTTTCAGCACCTCCTATACCTGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAAAATCTTAAAATGTAGAGCATGTTTCAGCACCTCCTATACCTGCC  200

seq1  AATAGCGACCAGTGAGGCGGTTCCGCAGCCACAGCCACGTCATAAGGAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGCGACCAGTGAGGCGGTTCCGCAGCCACAGCCACGTCATAAGGAAT  250

seq1  ACCATGATGGGCTCCCGAATCCTGAGGACGCATCATTTATTTTTGTACCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGATGGGCTCCCGAATCCTGAGGACGCATCATTTATTTTTGTACCA  300

seq1  TGAAAAGTTCTGAATGCTTTCTTATGAATCTTTCCCATATGCAGGGGCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAGTTCTGAATGCTTTCTTATGAATCTTTCCCATATGCAGGGGCCC  350

seq1  CCTGCCCAGTCAGTGCTACTTACCTGTGAATCTGAGAGCCCTGGATGGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCCCAGTCAGTGCTACTTACCTGTGAATCTGAGAGCCCTGGATGGTG  400

seq1  AAGAGAGGAAAGAGTAGCAAAGGATCCTGTATGTTAGAGGGAATGAGGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAGGAAAGAGTAGCAAAGGATCCTGTATGTTAGAGGGAATGAGGAA  450

seq1  CGATTGGGAGGGGCTTCAAGTCCCAGTAGAAAGGGGACATGAGATTGGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATTGGGAGGGGCTTCAAGTCCCAGTAGAAAGGGGACATGAGATTGGTT  500

seq1  TGGCCAGATTCTATTTCCTTCCAAATAGTTCTGGATATTTGCACCATGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCAGATTCTATTTCCTTCCAAATAGTTCTGGATATTTGCACCATGAA  550

seq1  TAACATCAGAATATTCCCATTGTAAGTAGTAGAAGACTATGTAAGAATTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATCAGAATATTCCCATTGTAAGTAGTAGAAGACTATGTAAGAATTA  600

seq1  ATATACAGAGGCAAATATAATTTAATTTGGTTTTGTATGTGAAGAATGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACAGAGGCAAATATAATTTAATTTGGTTTTGTATGTGAAGAATGCT  650

seq1  GTTTCTTTTCCATTCATATCTTCTTATTATAATTATGTTTGTCAGAACAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTTTTCCATTCATATCTTCTTATTATAATTATGTTTGTCAGAACAA  700

seq1  TGGATGCCTCTTAGTTTTTCTTGATATTAGAGTTTTGGAGCATTTTGTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATGCCTCTTAGTTTTTCTTGATATTAGAGTTTTGGAGCATTTTGTAT  750

seq1  TTCCTTTAGGTTCTCTTGTCTTTTATGGTTAATTTCTCCATTTCCTAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTAGGTTCTCTTGTCTTTTATGGTTAATTTCTCCATTTCCTAAAA  800

seq1  CAATGCCAGCTCAATTTTGATAACATTTGATTAATATTTCTGCATAATAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGCCAGCTCAATTTTGATAACATTTGATTAATATTTCTGCATAATAT  850

seq1  TAAACCTATCTATATTACCTTTCCATTGATATCTGCTGTTGTCTGTCTTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCTATCTATATTACCTTTCCATTGATATCTGCTGTTGTCTGTCTTC  900

seq1  TTGTCAACTGTCAATATTTTGCT-ATAATTTTAATATATTTTGAAATCAC  949
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TTGTCAACTGTCAATATTTTGCTAATAATTTTAATATATTTTGAAATCAC  950

seq1  CCATGATTTTGATTCTTCTCTAATTTTTTAAAGTCTTAATGGTTTCACAT  999
      ||||||||||||||||||||||| ||||||||||| ||||||||||||||
seq2  CCATGATTTTGATTCTTCTCTAA-TTTTTAAAGTC-TAATGGTTTCACAT  998

seq1  TTCATGAATGTGCTTGGAATAATAGAAATAATTCTCTATTTATATTTCAA  1049
      | |||||||||||||||||| |||||||  ||||||||||||||||||||
seq2  TCCATGAATGTGCTTGGAAT-ATAGAAAATATTCTCTATTTATATTTCAA  1047

seq1  AATGTCTGTAGGATTTTGGTATTTCAAATCTTAAAATCATCCTTTTATAT  1099
      |  |||||||||||||  ||||    |||||  ||||||||  |||||||
seq2  ATGGTCTGTAGGATTT--GTAT---CAATCT--AAATCATC--TTTATAT  1088

seq1  TTCTTCACATGATTA  1114
      | |||||||||||||
seq2  TCCTTCACATGATTA  1103