Query= MSMg01no046_f06.b1 MSMg01no046_f06.b1 CHROMAT_FILE:
MSMg01no046_f06.b1 PHD_FILE: MSMg01no046_f06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:06:28 2005
(638 letters)
>mm_chr17_32939325_32940362
Length = 1038
Score = 1164 bits (602), Expect = 0.0
Identities = 626/634 (98%), Gaps = 1/634 (0%)
Strand = Plus / Minus
Query: 5 gaattctctgtttagctctgtacccca-tttttaattggagtacttatttttatttgggg 63
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 822 gaattctctgtttagctctgtaccccattttttaattggagtacttatttttatttgggg 763
Query: 64 tatttattttctttgactagatgccataggaaacatactgtgtctctgtttgccttctta 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 762 tatttattttctttgactagatgccataggaaacatactgtgtctctgtttgccttctta 703
Query: 124 gtggttgctgaagtgtcctggccctttcaaaaggaaaaccaaacctgaagtgggggttgg 183
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 gtggttgctgaagtttcctggccctttcaaaaggaaaaccaaacctgaagtgggggttgg 643
Query: 184 gggaatccagaacctgttttcttttcctttctttttttttcttcctgttttctgtaacat 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 gggaatccagaacctgttttcttttcctttctttttttttcttcctgttttctgtaacat 583
Query: 244 ctctctctaattcttcataccttttgtcctgtctcacttatcttttcctttttcacactg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 ctctctctaattcttcataccttttgtcctgtctcacttatcttttcctttttcacactg 523
Query: 304 aaacaatgtcttacctctggatataactagttcataatctcacaccccccacctccgctt 363
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 522 aaacaatgtcttacctctggataaaactagttcataatctcacaccccccacctccgctt 463
Query: 364 tgtctttaaaaactttgttttaaaaacatatcctcactggggagtggtggcgcatgcctt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 tgtctttaaaaactttgttttaaaaacatatcctcactggggagtggtggcgcatgcctt 403
Query: 424 taatcccagctcttgggaggcagaggcaggcggatttctgagttcaagttcagcctgttc 483
|||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct: 402 taatcccagcacttgggaggcagaggcaggcggatttctgagttcaaggtcagcctggtg 343
Query: 484 tacagagtgagttctaggacagccagggctacacagagaaaccctgtcttgaaaaaaacc 543
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 tacagagtgagttccaggacagccagggctacacagagaaaccctgtcttgaaaaaaacc 283
Query: 544 aaaaccaaacaaacaaacaaacataaaacccaaaatcaaaaaccaaaaaccatatcctca 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 aaaaccaaacaaacaaacaaacataaaacccaaaatcaaaaaccaaaaaccatatcctca 223
Query: 604 taccatcatccttttaacatcttcctcgaaagca 637
||||||||||||||||||||||||||||||||||
Sbjct: 222 taccatcatccttttaacatcttcctcgaaagca 189
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 638
Length of database: 1038
Length adjustment: 10
Effective length of query: 628
Effective length of database: 1028
Effective search space: 645584
Effective search space used: 645584
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no046_f06.g1 MSMg01no046_f06.g1 CHROMAT_FILE:
MSMg01no046_f06.g1 PHD_FILE: MSMg01no046_f06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:06:28 2005
(553 letters)
>mm_chr17_32777552_32778504
Length = 953
Score = 1031 bits (533), Expect = 0.0
Identities = 551/563 (97%), Gaps = 10/563 (1%)
Strand = Plus / Plus
Query: 1 aaaccttggaacccaaggaaagagtcaggtacataaaaacatgacatctcagctcttggg 60
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 191 aaaccttggaacccaaggaaagagtcagatacataaaaacatgacatctcagctcttggg 250
Query: 61 ggtttccaggagtatcaaagaca----------tttggtaaacaagatataaacaggttg 110
||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 251 ggtttccaggagtatcaaagacaataagcaccatttggtaaacaagatataaacaggttg 310
Query: 111 aaaggattgagcttgacagaggggtaggtagctattttcctaactaaattatgcacgttt 170
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 aaaggattgagcttgacagaggggtaggtagctattttcctaactaaattatgcacgttt 370
Query: 171 ccctcctgggtgcacttcaattgttcacccaataaaggaggtgggtgcaggcatagccta 230
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 ccctcctgggtgcacttcaattgttcacccaataaaggaggtgggtgcaggcatagccta 430
Query: 231 ggaggtgggtgaacgtttctccattaagtcccaggctagaccaaacagctccattgtttg 290
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 ggaggtgggtgaacatttctccattaagtcccaggctagaccaaacagctccattgtttg 490
Query: 291 ttcattggaggtgagggaaatgcgtggagactttatgaaatgccacagaaaaagacagac 350
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 ttcattggaggtgagggaaatgcgtggagactttatgaaatgccacagaaaaagacagac 550
Query: 351 agataatacaagtgagcaaaatcattttatgttgtatttgtccttatcaacagttcacct 410
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 agataatacaagtgagcaaaatcattttatgttgtatttgtccttatcaacagttcacct 610
Query: 411 taatattgtcttagttatgaacttgtcacctgacacttgctcagaacacaaggctctcag 470
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 taatattgtcttagttatgaacttgtcacctgacacttgctcagaacacaaggctctcag 670
Query: 471 agtgcttcattaggttgtctccataaccactattcattatgggatggtggtttgggactt 530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 agtgcttcattaggttgtctccataaccactattcattatgggatggtggtttgggactt 730
Query: 531 tgaattgttgttttgcccatctg 553
|||||||||||||||||||||||
Sbjct: 731 tgaattgttgttttgcccatctg 753
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 553
Length of database: 953
Length adjustment: 10
Effective length of query: 543
Effective length of database: 943
Effective search space: 512049
Effective search space used: 512049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
