MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-049M05
Chromosome	17 (Build37)
Map Location	18,496,507 - 18,496,998
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Riok2, Lix1, LOC383297, Lnpep, EG665140, LOC100041519, EG626942, 4930546H06Rik, Has1, Fpr1, Fpr-rs2, LOC665183, LOC670250, EG665187, LOC546683, Fprl1, LOC627060, Fpr-rs4, EG637021, EG665210, Vmn2r92, EG665227, EG627132
Downstream gene	LOC100041612, Vmn2r95, Vmn2r-ps114, EG433070, Vmn2r-ps115, Vmn2r-ps117, LOC100042183, EG627367, EG224552, LOC665344, LOC627466, LOC627476
Link	Open Mouse BAC browser

Click to get alignment info.

name	Riok2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67045 MGI:1914295
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lix1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66643 MGI:1913893
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC383297 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:383297
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Lnpep (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:240028 MGI:2387123
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG665140 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665140 MGI:3643010
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins pseudo : _no_value

name	LOC100041519 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041519
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	EG626942 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:626942 MGI:3645076
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 20 Proteins

name	4930546H06Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75202 MGI:1922452
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Has1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15116 MGI:106590
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Fpr1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14293 MGI:107443
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Fpr-rs2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14289 MGI:1278319
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC665183 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665183
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	LOC670250 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:670250
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	EG665187 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665187 MGI:3644434
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 148 ESTs, 6 Proteins pseudo : _no_value

name	LOC546683 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:546683
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 Proteins pseudo : _no_value

name	Fprl1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14294 MGI:1194495
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC627060 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:627060
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 Proteins pseudo : _no_value

name	Fpr-rs4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14291 MGI:1278317
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 10 Proteins

name	EG637021 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:637021 MGI:3643332
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 17 Proteins

name	EG665210 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665210 MGI:3645072
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 21 Proteins

name	Vmn2r92 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:627111
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 19 Proteins

name	EG665227 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665227 MGI:3648050
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 19 Proteins

name	EG627132 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:627132 MGI:3645591
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 18 Proteins

name	LOC100041612 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041612
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA

name	Vmn2r95 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:328759
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 18 Proteins

name	Vmn2r-ps114 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041645
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	EG433070 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:433070 MGI:3644514
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 14 Proteins

name	Vmn2r-ps115 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665292
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 Proteins pseudo : _no_value

name	Vmn2r-ps117 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665303
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 16 Proteins pseudo : _no_value

name	LOC100042183 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042183
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 17 ESTs

name	EG627367 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:627367 MGI:3645271
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 16 Proteins

name	EG224552 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:224552 MGI:3647977
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 18 Proteins

name	LOC665344 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665344
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 16 Proteins pseudo : _no_value

name	LOC627466 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:627466
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins pseudo : _no_value

name	LOC627476 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:627476
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 17 Proteins pseudo : _no_value

name	Riok2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:13385427 GeneID:67045 MGI:1914295
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIO kinase 2 (yeast) transcript_id : NM_025934.1

name	Lix1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118403301 GeneID:66643 MGI:1913893
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : limb expression 1 homolog (chicken) transcript_id : NM_025681.2

name	Lnpep (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802386 GeneID:240028 MGI:2387123
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : leucyl/cystinyl aminopeptidase transcript_id : NM_172827.2

name	EG626942 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149268496 GeneID:626942 MGI:3645076
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 20 Proteins product : predicted gene, EG626942 transcript_id : XM_891564.2

name	4930546H06Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802652 GeneID:75202 MGI:1922452
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930546H06 gene transcript_id : NM_029205.2

name	Has1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6680168 GeneID:15116 MGI:106590
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hyaluronan synthase1 transcript_id : NM_008215.1

name	Fpr1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71361679 GeneID:14293 MGI:107443
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : formyl peptide receptor 1 transcript_id : NM_013521.2

name	Fpr-rs2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:50345973 GeneID:14289 MGI:1278319
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : formyl peptide receptor, related sequence 2 transcript_id : NM_008039.2

name	LOC670250 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268571 GeneID:670250
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : similar to mitochondrial ribosomal protein L41 transcript_id : XM_001478218.1

name	Fprl1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124358929 GeneID:14294 MGI:1194495
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : formyl peptide receptor-like 1 transcript_id : NM_008042.2

name	EG637021 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149268498 GeneID:637021 MGI:3643332
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 17 Proteins product : predicted gene, EG637021 transcript_id : XM_975323.2

name	EG665210 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149268502 GeneID:665210 MGI:3645072
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 21 Proteins product : predicted gene, EG665210 transcript_id : XM_975359.2

name	Vmn2r92 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268508 GeneID:627111
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 19 Proteins product : vomeronasal receptor Vmn2r92 transcript_id : XM_001476639.1

name	EG665227 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149268510 GeneID:665227 MGI:3648050
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 19 Proteins product : predicted gene, EG665227 transcript_id : XM_975475.2

name	EG627132 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149268512 GeneID:627132 MGI:3645591
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 18 Proteins product : predicted gene, EG627132 transcript_id : XM_891791.3

name	LOC100041612 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268514 GeneID:100041612
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA product : similar to pol protein transcript_id : XM_001476688.1

name	Vmn2r95 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268518 GeneID:328759
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 18 Proteins product : vomeronasal receptor Vmn2r95 transcript_id : XM_001476711.1

name	EG433070 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149268524 GeneID:433070 MGI:3644514
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 14 Proteins product : predicted gene, EG433070 transcript_id : XM_484597.5

name	LOC100042183 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268580 GeneID:100042183
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 17 ESTs product : hypothetical protein LOC100042183 transcript_id : XM_001478279.1

name	EG627367 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149268529 GeneID:627367 MGI:3645271
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 16 Proteins product : predicted gene, EG627367 transcript_id : XM_892023.3

name	EG224552 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149268531 GeneID:224552 MGI:3647977
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 18 Proteins product : predicted gene, EG224552 transcript_id : XM_139768.6

name	Riok2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385428 CCDS:CCDS28417.1 GeneID:67045 MGI:1914295
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 product : RIO kinase 2 protein_id : NP_080210.1

name	Lix1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:118403302 GeneID:66643 MGI:1913893
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : limb expression 1 protein_id : NP_079957.2

name	Lnpep (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370240 GeneID:240028 MGI:2387123
definition	GO_component : GO:0005624 - membrane fraction [Evidence IMP]; GO:0005792 - microsome [Evidence IDA]; GO:0048471 - perinuclear region [Evidence IDA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0004177 - aminopeptidase activity [Evidence IMP]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0030163 - protein catabolism [Evidence IMP] codon_start : 1 product : leucyl/cystinyl aminopeptidase protein_id : NP_766415.1

name	EG626942 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149268497 GeneID:626942 MGI:3645076
definition	codon_start : 1 product : similar to putative pheromone receptor protein_id : XP_896657.2

name	4930546H06Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037403 GeneID:75202 MGI:1922452
definition	codon_start : 1 product : hypothetical protein LOC75202 protein_id : NP_083481.1

name	Has1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680169 GeneID:15116 MGI:106590
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0050501 - hyaluronan synthase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0016757 - transferase activity, transferring glycosyl groups [Evidence IEA] codon_start : 1 product : hyaluronan synthase1 protein_id : NP_032241.1

name	Fpr1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305065 CCDS:CCDS28418.1 GeneID:14293 MGI:107443
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004982 - N-formyl peptide receptor activity [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0006935 - chemotaxis [Evidence TAS]; GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IDA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : lipoxin A4 receptor product : formyl peptide receptor 1 protein_id : NP_038549.1

name	Fpr-rs2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679853 CCDS:CCDS28419.1 GeneID:14289 MGI:1278319
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] GO_function : GO:0004943 - C3a anaphylatoxin receptor activity [Evidence IEA]; GO:0004982 - N-formyl peptide receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IDA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA] GO_process : GO:0006935 - chemotaxis [Evidence IEA]; GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA] codon_start : 1 note : lipoxin A4 receptor-like protein product : formyl peptide receptor, related sequence 2 protein_id : NP_032065.1

name	LOC670250 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268572 GeneID:670250
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478268.1

name	Fprl1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124358930 CCDS:CCDS28420.1 GeneID:14294 MGI:1194495
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004943 - C3a anaphylatoxin receptor activity [Evidence IEA]; GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004982 - N-formyl peptide receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IDA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0006935 - chemotaxis [Evidence TAS]; GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IDA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : formyl peptide receptor-like 1 protein_id : NP_032068.2

name	EG637021 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149268499 GeneID:637021 MGI:3643332
definition	codon_start : 1 product : similar to putative pheromone receptor protein_id : XP_980417.2

name	EG665210 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149268503 GeneID:665210 MGI:3645072
definition	codon_start : 1 product : similar to putative pheromone receptor protein_id : XP_980453.2

name	Vmn2r92 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268509 GeneID:627111
definition	codon_start : 1 product : similar to putative pheromone receptor protein_id : XP_001476689.1

name	EG665227 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149268511 GeneID:665227 MGI:3648050
definition	codon_start : 1 product : similar to putative pheromone receptor protein_id : XP_980569.2

name	EG627132 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149268513 GeneID:627132 MGI:3645591
definition	codon_start : 1 product : similar to putative pheromone receptor protein_id : XP_896884.3

name	LOC100041612 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268515 GeneID:100041612
definition	codon_start : 1 product : similar to pol protein protein_id : XP_001476738.1

name	Vmn2r95 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268519 GeneID:328759
definition	codon_start : 1 product : similar to putative pheromone receptor protein_id : XP_001476761.1

name	EG433070 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149268525 GeneID:433070 MGI:3644514
definition	codon_start : 1 product : similar to putative pheromone receptor protein_id : XP_484597.5

name	LOC100042183 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268581 GeneID:100042183
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478329.1

name	EG627367 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149268530 GeneID:627367 MGI:3645271
definition	codon_start : 1 product : similar to putative pheromone receptor protein_id : XP_897116.3

name	EG224552 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149268532 GeneID:224552 MGI:3647977
definition	codon_start : 1 product : similar to putative pheromone receptor protein_id : XP_139768.6

name	LOC383297 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:383297
definition	number : 1 pseudo : _no_value

name	EG665140 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665140
definition	number : 1 pseudo : _no_value

name	EG665140 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665140
definition	number : 2 pseudo : _no_value

name	LOC100041519 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041519
definition	number : 4 pseudo : _no_value

name	LOC100041519 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041519
definition	number : 3 pseudo : _no_value

name	LOC100041519 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041519
definition	number : 2 pseudo : _no_value

name	LOC100041519 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041519
definition	number : 1 pseudo : _no_value

name	LOC665183 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665183
definition	number : 2 pseudo : _no_value

name	LOC665183 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665183
definition	number : 1 pseudo : _no_value

name	LOC546683 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:546683
definition	number : 1 pseudo : _no_value

name	LOC627060 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:627060
definition	number : 1 pseudo : _no_value

name	Vmn2r-ps114 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041645
definition	number : 1 pseudo : _no_value

name	Vmn2r-ps114 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041645
definition	number : 2 pseudo : _no_value

name	Vmn2r-ps115 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665292
definition	number : 1 pseudo : _no_value

name	Vmn2r-ps115 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665292
definition	number : 2 pseudo : _no_value

name	Vmn2r-ps115 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665292
definition	number : 3 pseudo : _no_value

name	Vmn2r-ps115 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665292
definition	number : 4 pseudo : _no_value

name	Vmn2r-ps115 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665292
definition	number : 5 pseudo : _no_value

name	Vmn2r-ps115 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665292
definition	number : 6 pseudo : _no_value

name	Vmn2r-ps115 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665292
definition	number : 7 pseudo : _no_value

name	Vmn2r-ps115 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665292
definition	number : 8 pseudo : _no_value

name	Vmn2r-ps117 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665303
definition	number : 1 pseudo : _no_value

name	Vmn2r-ps117 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665303
definition	number : 2 pseudo : _no_value

name	Vmn2r-ps117 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665303
definition	number : 3 pseudo : _no_value

name	Vmn2r-ps117 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665303
definition	number : 4 pseudo : _no_value

name	Vmn2r-ps117 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665303
definition	number : 5 pseudo : _no_value

name	Vmn2r-ps117 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665303
definition	number : 6 pseudo : _no_value

name	Vmn2r-ps117 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665303
definition	number : 7 pseudo : _no_value

name	LOC665344 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665344
definition	number : 1 pseudo : _no_value

name	LOC665344 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665344
definition	number : 2 pseudo : _no_value

name	LOC665344 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665344
definition	number : 3 pseudo : _no_value

name	LOC665344 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665344
definition	number : 4 pseudo : _no_value

name	LOC665344 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665344
definition	number : 5 pseudo : _no_value

name	LOC665344 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665344
definition	number : 6 pseudo : _no_value

name	LOC665344 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665344
definition	number : 7 pseudo : _no_value

name	LOC665344 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665344
definition	number : 8 pseudo : _no_value

name	LOC627466 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:627466
definition	number : 1 pseudo : _no_value

name	LOC627476 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:627476
definition	number : 1 pseudo : _no_value

name	LOC627476 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:627476
definition	number : 2 pseudo : _no_value

name	LOC627476 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:627476
definition	number : 3 pseudo : _no_value

name	LOC627476 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:627476
definition	number : 4 pseudo : _no_value

name	LOC627476 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:627476
definition	number : 5 pseudo : _no_value

name	LOC627476 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:627476
definition	number : 6 pseudo : _no_value

name	LOC627476 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:627476
definition	number : 7 pseudo : _no_value

name	EG665187 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149268568 GeneID:665187 MGI:3644434
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 148 ESTs, 6 Proteins product : predicted gene, EG665187 pseudo : _no_value transcript_id : XR_001702.2

name	Fpr-rs4 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149268573 GeneID:14291 MGI:1278317
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 10 Proteins product : formyl peptide receptor, related sequence 4 transcript_id : XR_035345.1

clone name	MSMg01-494F06
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-515F20
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-449I17
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-306J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-122L12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-066J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-137M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-424K06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-459P18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-362B13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-064N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-145I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-146J04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136F01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-492A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-291A03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-277L13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-115N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-387B11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-450A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-443H09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-458J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-203O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116C23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-105O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-355L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422N20
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-532J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416D04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-304C10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-494K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-307A13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-356J01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-145F02
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-159K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-159J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531A15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-271I19
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-385P05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-049M05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421G08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-507F07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-049G13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-355H17
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-127G07
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-327B21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-173M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-080G16
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-311J01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-298A23
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-187B06
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-217N13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-050F14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-154G16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374E24
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-260E15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-436B23
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-504O08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-148M06
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-093A08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-491O19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-309A24
singlet/doublet	singlet
plural/unique	plural

clone name	B6Ng01-208P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-349O02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-264C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240H15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-055N03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-053N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144E06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028M13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-185E24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212I18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023C06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-077E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-070I16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-035B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075G06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-160O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-277I11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-016J14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015D02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272C05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149L09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-287I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062P05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-009N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147D13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227N03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151K10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-157L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182P15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-191J13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148K21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-203A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231F22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112J07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-273J20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150H08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235O10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-186M24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-132I11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-069P11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-101M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178F07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-195I11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-298D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-283O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293K15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-072B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018J05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-012F05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256H09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046F22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287D06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-190C04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-267I22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-226G22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231H12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-145H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063O15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-287I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100A23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146L08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-323B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156N08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-287O17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-139F24
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-049M05.T7 (MSMg01no049_m05.b1)	MSMg01-049M05.TJ (MSMg01no049_m05.g1)
ACC	AG279093	AG279094
length	1,200	1,294
length of high quality (start - end)	500 (42 - 541)	406 (76 - 481)
definition	CHROMAT_FILE: MSMg01no049_m05.b1 PHD_FILE: MSMg01no049_m05.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 12:12:06 2005	CHROMAT_FILE: MSMg01no049_m05.g1 PHD_FILE: MSMg01no049_m05.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 12:12:07 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	NNTTTGCAATGGGCGCTAXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT CTCTAGATATAGGACACCCCTTTTTGCTGAGCACATCTTCCTCCACACTA TAAAAATTTTCCTTGAAGATATTAATAATAATATATTCACACCGATATGC AATTCAGCACATTGAGTATATTTTTCCAAAGTCCCGCTTAGTATCATACC CACCCTCTCTGACTATATCTCTCATCCTCAACTTTTTGTTTTGTCAGGAG GATCATAGGACAAACCAATAACTAGCAGGTGATCTTTTTAAAATGACCTC TCTTTAGATAATATTTATGAAGAAGCTCCAATAGGCAAGGAATAAAATTA AATCATTTTTAGAAAGATTTTTGCTGTTATTGTACTTTTCCTGTTATTCT TAAACATTATATAACAATAGCTAGGTATTTTCCCACCTCTTTCAGCAGTT GTCTGCAGATCCAGGACGATGTATTGTCTTGGAGTGATGGTATATACACA AATGAGCGACTTCTCAATTCATAATGATGATCATATAACAATTCCTAACA TTATATTGGTGTTTACTAGGATTTGCCTTCTATTACTTTATCATATATAT CTTACTTTTTATCTTCATCATTTTTCTTATTCCTCAATAACTTCATCATT TTCTCATTTCTTTTAATCTCCCTTCTTTCATATTTTAATTCTCTTTAATT TTTTTTATTTCTCCAATCATCTATCTTTACCCTTCTTATTTCTTTATCTT ATCTTCTATTTTATTTTCTTTATCACATTCTAATAAAATTATTTTTTTTT CATCATCATCTATTCTTTAAGTTTTCTCTCTTCATTACCTATTACTTTTT CTCTCATCCCCCTATTCCTTCCATTTCTTACATTCATTCATTCAACTATT TTTATTCATATTTCAATTTTATTATTTTTGACTATTTTTTAATTTCTCAA TTATTACATTCTCTCTATATCCTACTATTTCATATCTCTAACACTAAATT TTCCCCCCCCCTTTAATTTTATACCTTATTCTATTTCAATCATCTATCCA TAAAACAATCCATATATATTTACCTCATATTACTCTTATTAAATCTCATA ATTATTTCTCCCTTCATCCACTATTTACATTTAATTACATATATTCCCTT TTATTACTTATATTTAACACCCATTCCTATATACCTTATACTTAAACATT	NNTTTTATCACGGAGNCTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXTTATAGAGTGAAAACACTTGTCTTATGCC TAATTTTGATCAACACCCTTTAAGTTTCTCTCCCTTTAATTTGATATGTG CTATTGGCTAATTTATATTGACTTTACTTATATTAGGTAAATAAATTGTG TCCCTAATGACTCCAAGACATTTATGATAAAGTGGATTTGATTTTCTAAA AACATTTTTCAGTATGAAAAATGAGATGGCTATTTTCTCAAACTAATTTA TATGTTGGATTACATTGGGAGATTTTTTTTTTTTACAATTTGTATATCCA TAATAAGGAAACCTACTTGATTATAGTAGATGGTCTTTTTGATATGTTCT TAGATTGTGTTTGTCAGATCGTTTGAGTATTTTGGGACAATTTTCCTAAC CACAATTGATGTGAAAGTCTCTTATTTCCCTGAGTCTTTGTTTATTAATA TATCAGTGTCCTTGTATTTTCACAATATTATATTGCCACAATTCCTTTCC TCTCTCTTTTATCATTCATGCGTGTTATATGAAATTACAATCTTCTTTAA ACTTAAATTTTATTTTTTTATTTTTTCAAATTTTAATCTTACTGCTTCTA TCTATTAATTCATTTATTTTATAGTTCTTTATATTTCTCTTTTTTCCTTT TTAATTTTATATATTTTATTTTTTTTCTCTCTATTAACTTTTCTTTTTTC CAAATTCTCTAATTTTATTATCAACCCATTATCTATCTTTTACTCTTTTA TCCATCTTATTTTACTTAAACTTTAATCTATATTTCTTCTTCCTTCTTAT CATCATTATCACTATCATATATCTATATTTATTTATACTCTTTATTAATT CTAATTTTTTTTCTTTTTAATCTTTTTTCATATTTCCTATCTTCTTCTTT TAATATTAAATTCATTTATCTATATCATCTTTCTTTAACTATTATTTCTA TCTCAATTTTTTTCTTACTTTTTTTCATTTCATTTTTATCTATTACTCAT CTTATTTATCATCTCATTTAATCTATTCCATTCTCTATATCTATACTATT CTCTAATTTTTTTTCTATTTATAATTTTACTTCATTATCTATATTACTTT AATTAACTCCTTTTATACATTTCTTCCTTATTATTATCCTCCAATACCTC TTATAATCTTCTATCTATTAACCTAAATGTTATTTATAAATTCATCTACT TACAACTATATACTCTTTATAACTCTCCTTCTTACTAATACTTA
quality values	Open. Hide. 0 0 3 6 6 7 3 7 8 7 8 10 13 10 10 8 8 8 8 8 8 12 15 10 8 8 10 12 14 14 14 33 29 24 25 22 22 22 28 33 33 33 37 33 32 24 23 26 28 41 37 33 33 33 33 33 33 47 47 53 33 33 33 37 37 37 21 21 10 9 9 9 10 13 17 15 21 24 32 37 43 48 47 47 50 50 50 53 53 42 43 43 47 47 53 50 47 47 47 47 47 47 68 68 68 68 59 59 54 32 34 23 23 19 25 25 43 48 57 57 47 50 50 47 47 53 53 53 53 53 53 53 53 50 50 50 50 41 41 21 20 10 10 10 15 21 37 41 41 50 50 50 50 53 53 50 50 47 57 57 57 57 57 57 43 43 43 47 47 53 53 53 68 68 68 68 68 68 68 68 68 68 68 68 68 68 50 51 51 51 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 57 57 59 59 57 57 57 57 57 68 57 57 57 57 57 57 57 68 68 68 59 59 59 59 59 57 57 57 57 57 57 59 59 59 68 68 68 68 68 68 68 59 44 44 35 35 44 44 57 57 52 52 44 44 52 52 43 43 43 68 68 62 62 62 68 68 68 68 68 62 62 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 68 68 43 62 52 52 52 62 62 68 68 62 62 62 62 62 62 62 62 62 62 62 62 62 68 68 68 68 62 62 68 62 62 62 62 68 68 59 59 59 41 39 24 24 19 33 33 33 43 41 47 43 59 59 68 68 59 59 35 35 43 44 44 44 44 43 43 52 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 44 52 52 43 43 35 35 50 50 57 57 57 27 27 11 11 11 27 27 52 54 57 59 57 57 57 57 57 59 59 57 57 59 57 57 57 57 48 48 48 48 59 59 59 42 35 35 42 42 59 59 46 30 23 12 12 19 27 42 57 57 59 59 41 41 20 20 23 34 34 54 59 34 41 20 20 19 32 21 32 32 42 43 59 43 42 24 24 20 20 18 26 15 15 10 12 9 9 10 23 32 57 48 48 36 36 25 25 25 34 34 34 30 24 14 14 23 13 14 9 10 10 11 6 6 6 6 8 8 9 8 8 8 9 10 10 10 10 7 7 8 8 8 11 11 11 8 10 8 9 6 8 6 6 8 8 8 8 6 6 8 8 10 8 8 8 8 8 8 16 11 10 10 10 8 8 7 7 8 8 8 8 8 9 9 9 11 11 11 10 10 8 8 8 6 7 8 9 13 8 8 8 8 9 9 13 10 8 8 8 8 8 6 6 8 8 10 10 13 13 12 8 8 8 8 8 8 8 8 8 8 9 8 8 8 8 8 8 8 8 8 8 8 10 10 11 11 9 9 10 13 10 10 12 12 11 11 11 8 8 6 6 6 6 8 8 9 9 9 10 10 9 9 10 8 8 6 6 8 8 6 8 8 13 16 16 10 10 8 8 8 8 8 8 6 6 8 8 7 7 11 10 10 10 10 10 10 10 10 10 8 9 9 8 8 8 8 8 8 8 15 12 8 9 9 12 11 10 9 9 8 8 10 8 8 8 8 8 8 8 8 10 10 10 10 13 12 10 11 11 8 8 8 8 8 8 6 6 8 10 10 8 8 6 6 8 8 8 8 10 8 8 8 8 8 8 8 8 9 8 8 6 6 8 8 8 8 8 10 11 13 11 11 11 9 9 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 9 10 13 9 9 9 9 10 12 8 8 8 8 6 6 8 8 8 6 6 8 8 8 8 8 8 8 10 12 10 10 8 8 8 8 9 9 7 7 8 8 8 8 10 10 11 12 12 11 11 8 12 10 8 10 8 8 10 10 8 8 7 7 8 8 8 8 8 11 11 9 9 9 12 10 12 12 11 10 8 6 6 8 8 9 9 9 13 8 8 8 8 13 8 6 6 8 8 8 10 10 8 8 8 10 11 11 11 9 9 10 12 12 12 16 11 8 8 8 8 11 15 11 8 8 8 8 11 11 12 8 8 8 8 7 8 12 13 23 29 20 16 14 10 8 6 8 10 10 8 10 10 8 8 10 8 8 6 6 8 6 6 8 6 6 10 8 9 9 8 8 10 8 8 8 8 8 8 8 10 10 12 14 26 13 10 12 12 8 8 6 6 8 8 9 9 13 13 17 11 10 10 10 9 10 9 11 8 10 10 8 8 8 8 8 12 8 8 8 10 10 10 8 10 10 10 10 10 8 8 8 8 8 8 8 8 7 7 8 10 10 10 8 8 8 8 8 8 6 6 8 8 8 8 10 10 10 10 10 8 8 8 8 8 8 8 8 8 8 8 8 10 15 11 15 10 8 10 8 8 8 8 8 10 8 8 8 8 8 8 8 10 8 6 6 8 12 7 7 6 6 8 8 10 10 11 13 8 8 8 10 8 8 8 8 8 8 11 15 8 6 6 8 8 8 8 10 10 6 6 8 8 6	Open. Hide. 0 0 3 7 6 8 8 6 6 6 6 6 6 6 3 0 3 6 6 6 8 8 8 15 8 8 8 7 8 9 14 27 21 21 10 10 10 21 21 29 22 22 29 36 38 36 50 50 37 42 53 53 50 50 50 57 53 59 59 59 59 59 42 41 27 27 9 9 9 9 9 14 14 24 24 17 22 22 33 33 36 37 44 59 59 57 57 50 50 50 50 50 47 47 53 53 50 50 50 53 53 68 68 68 68 57 41 34 18 11 11 11 11 23 26 43 50 53 48 48 48 50 50 50 51 51 51 68 68 68 68 57 57 47 41 38 40 42 48 50 57 59 68 68 68 57 68 68 68 50 50 50 51 50 68 68 68 68 68 68 68 68 68 68 51 51 51 50 50 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 59 59 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 59 59 59 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 59 59 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 59 59 68 68 68 68 68 68 68 68 57 57 42 36 33 44 44 48 57 57 59 48 59 59 68 68 68 68 68 59 59 59 41 32 18 12 12 32 32 24 27 12 12 15 27 32 57 41 41 25 25 25 26 34 37 39 39 30 30 30 40 39 35 35 35 59 59 59 57 48 48 48 48 48 41 41 40 41 34 27 22 9 9 9 16 15 12 12 15 15 19 28 30 43 37 37 28 28 37 41 59 47 39 33 33 25 28 30 37 42 28 23 12 9 9 12 12 28 28 35 39 39 40 37 28 23 19 18 13 9 9 9 16 16 23 23 30 30 27 15 15 12 15 10 11 17 17 19 19 31 33 43 43 43 27 27 12 11 11 11 11 17 11 18 12 18 18 18 12 11 11 11 11 18 16 15 10 8 8 8 11 17 9 9 9 9 9 10 10 10 10 8 8 8 8 8 8 9 17 15 8 8 8 8 10 13 19 22 24 21 20 22 18 24 15 13 13 10 10 10 12 17 21 14 14 13 13 13 13 8 8 8 8 10 12 16 20 19 14 22 8 8 8 8 8 10 13 10 11 11 10 8 8 8 8 8 8 10 10 9 9 9 9 15 16 19 12 12 8 8 8 8 8 8 10 11 12 11 11 12 10 9 9 9 9 12 13 9 9 10 10 10 10 12 12 17 9 8 8 8 8 8 8 9 9 10 8 19 12 9 9 10 13 10 8 8 8 8 8 8 10 10 9 9 9 9 10 10 10 9 8 8 8 8 8 8 8 6 6 8 8 10 12 8 8 8 8 8 8 8 8 8 6 6 10 8 6 6 8 8 8 8 8 8 10 8 8 8 8 10 10 10 10 11 19 19 14 14 14 10 10 8 8 8 8 10 8 8 8 8 10 8 9 11 11 11 11 11 11 11 17 18 13 15 11 11 13 8 8 6 6 8 6 6 6 8 8 8 8 12 12 8 8 8 8 8 8 9 9 10 10 8 8 7 7 8 8 8 8 8 8 8 8 8 8 6 7 10 8 8 8 8 8 8 11 9 9 9 11 10 10 8 8 8 8 8 8 8 8 10 10 10 8 8 11 12 10 8 6 7 8 8 8 8 8 8 11 10 10 10 8 8 6 6 8 8 8 8 8 8 8 10 8 8 8 6 6 8 8 8 9 9 9 6 6 6 6 10 8 8 8 8 8 8 8 8 8 7 6 8 8 6 6 8 8 9 9 10 9 9 8 8 8 6 8 7 6 8 8 8 8 10 8 8 6 6 8 8 8 10 10 8 8 8 8 8 8 8 8 8 8 10 6 6 8 8 9 9 9 10 10 8 9 8 8 8 8 8 8 8 8 10 10 10 10 8 10 10 8 8 8 8 8 15 12 8 8 6 7 7 6 8 8 8 7 7 9 9 10 10 8 8 8 7 9 13 9 9 8 8 8 8 8 8 8 8 8 8 8 8 8 8 6 6 8 11 10 8 8 10 9 9 9 11 9 8 8 8 8 8 8 10 10 9 9 9 9 8 8 8 8 8 8 8 10 10 10 10 8 8 10 10 9 8 8 6 6 8 7 8 10 8 10 10 13 14 15 11 11 10 12 10 8 9 8 9 10 10 8 8 6 6 8 8 10 11 10 10 8 8 8 8 8 8 8 6 6 8 8 8 8 8 6 6 8 8 10 8 8 6 7 8 8 8 8 8 8 8 8 8 6 6 8 8 8 8 8 8 8 8 8 8 6 6 6 6 8 8 8 8 10 10 10 10 10 10 10 9 8 8 8 8 8 8 8 8 8 8 10 19 19 18 18 11 8 8 6 6 8 10 8 6 6 8 8 10 9 9 10 9 8 8 8 8 8 8 8 8 8 8 8 6 7 10 10 10 9 9 9 8 10 10 9 9 9 9 9 8 10 10 10 13 10 10 9 10 8 8 6 6 8 8 8 8 8 9 9 10 9 10 10 9 9 12 8 8 8 8 6 6 8 8 10 10 11 10 8 8 8 8 8 8 8 12 10 6 6 8 10 8 6 8 8 10 8 8 8 13 11 13 9 10 9 9 9 8 8 7 7 8 8 7 7 10 8 8 10 8 8 6 8 8 8 10 9 8 8 7 6 8 8 8 6 6 8 8 9 10 12 12 14 13 9 9 9 6 12 6 6 8 8 8 9 10 10 10 10 10 8 8 15 8 8 8 6 6 8 6 6 8 6 6 8 6

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no049_m05.b1 MSMg01no049_m05.b1 CHROMAT_FILE:
MSMg01no049_m05.b1 PHD_FILE: MSMg01no049_m05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:12:06 2005
         (500 letters)



>mm_chr17_18496303_18497202
          Length = 900

 Score =  903 bits (467), Expect = 0.0
 Identities = 487/495 (98%), Gaps = 5/495 (1%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctctagatataggacaccccttt--ttgctgagcacatcttcctccacactataa 62
           ||||||||||||||||||||||||  ||  ||||||||||||||||||||||||||||||
Sbjct: 205 gaattctctagatataggacaccc--ttaattgctgagcacatcttcctccacactataa 262

                                                                       
Query: 63  aaattttccttgaagatattaataataatatattcacaccgatatgcaattcagcacatt 122
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 263 aaattttccttgaagatattaataataatatattcacactgatatgcaattcagcacatt 322

                                                                       
Query: 123 gagtatatttttccaaagtcccgcttagtatcatacccaccctctctgactatatctctc 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 gagtatatttttccaaagtcccgcttagtatcatacccaccctctctgactatatctctc 382

                                                                       
Query: 183 atcctcaactttttgttttgtcaggaggatcataggacaaaccaataactagcaggtgat 242
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 atcctcaactttttgttttgtcaggaggatcataggacaaaccaataactagcaggtgat 442

                                                                       
Query: 243 ctttttaaaatgacctctctttagataatatttatgaagaagctccaataggcaaggaat 302
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ctttttaaaatgacctctctttagataatatttatgaagaagctccaataggcaaggaat 502

                                                                       
Query: 303 aaaattaaatcatttttagaaagatttttgctgttattgtacttttcctgttattcttaa 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 aaaattaaatcatttttagaaagatttttgctgttattgtacttttcctgttattcttaa 562

                                                                       
Query: 363 acattatataacaatagctaggtattttcccacctctttcagcagttgtctgcagatcca 422
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 acat-atataacaatagctaggtattttcccacctctttcagcagttgtctgcagatcca 621

                                                                       
Query: 423 ggacgatgtattgtcttggagtgatggtatatacacaaatgagcgacttctcaattcata 482
           ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 622 ggaagatgtattgtcttggagtgatggtatatacacaaatgagtgacttctcaattcata 681

                          
Query: 483 atgatgatcatataa 497
           |||||||||||||||
Sbjct: 682 atgatgatcatataa 696


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 500
Length of database: 900
Length adjustment: 10
Effective length of query: 490
Effective length of database: 890
Effective search space:   436100
Effective search space used:   436100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information