Query= MSMg01no053_l05.b1 MSMg01no053_l05.b1 CHROMAT_FILE:
MSMg01no053_l05.b1 PHD_FILE: MSMg01no053_l05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:54:41 2005
(174 letters)
>mm_chr14_13023185_13023758
Length = 574
Score = 306 bits (158), Expect = 6e-88
Identities = 167/170 (98%)
Strand = Plus / Minus
Query: 5 gaattctctactcctctgctgtggctctctctcctaatgctgatgctgccctacactaac 64
|||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 374 gaattctctactccactgctgtggctctctcgcctaatgctgatgctgccctacactaac 315
Query: 65 cctgaggtatttgcttcttcaacaaggattttactttgtatatgggcaaagggacgaaca 124
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 314 cctgaggtatttgcttcttcaacaaggattttactttgtagatgggcaaagggacgaaca 255
Query: 125 tttttattaccttttagtcttagactgaatatcttagtatagaccaggcg 174
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 tttttattaccttttagtcttagactgaatatcttagtatagaccaggcg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 174
Length of database: 574
Length adjustment: 8
Effective length of query: 166
Effective length of database: 566
Effective search space: 93956
Effective search space used: 93956
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no053_l05.g1 MSMg01no053_l05.g1 CHROMAT_FILE:
MSMg01no053_l05.g1 PHD_FILE: MSMg01no053_l05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:54:41 2005
(221 letters)
>mm_chr17_93909874_93910490
Length = 617
Score = 369 bits (191), Expect = e-107
Identities = 212/223 (95%), Gaps = 8/223 (3%)
Strand = Plus / Minus
Query: 1 tcaaggtttcatagctaagtg--aaaaaaaaagtaattcagaggatcaaatctaataaac 58
||||||||||||||||||||| |||| |||||||||||||||||||||||||||
Sbjct: 417 tcaaggtttcatagctaagtggtaaaa------taattcagaggatcaaatctaataaac 364
Query: 59 aagagagtttaatgattattgcatttattgtgcaccaatttaattcactgttgcacacat 118
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 aagagagtttaatgattattgcatttattgtgcaccaatttaattcactgttgcacacaa 304
Query: 119 agtaaagctcttagctccacacttggcaaaataattacctcattaaaagaacatgtaagt 178
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 303 agtaaagctcttagctccacacttggcaaaataattacctcattaaaagaacatgtaaat 244
Query: 179 gtagctaatgagtcttcatggactcaggtttgcccaaggaaaa 221
|||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 243 gtagctaaggagtcttcatggactcaggtttgcccaaggaaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 221
Length of database: 617
Length adjustment: 9
Effective length of query: 212
Effective length of database: 608
Effective search space: 128896
Effective search space used: 128896
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
