Query= MSMg01no055_m18.b1 MSMg01no055_m18.b1 CHROMAT_FILE:
MSMg01no055_m18.b1 PHD_FILE: MSMg01no055_m18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:57:18 2005
(464 letters)
>mm_chr17_91327007_91327868
Length = 862
Score = 708 bits (366), Expect = 0.0
Identities = 382/388 (98%), Gaps = 3/388 (0%)
Strand = Plus / Minus
Query: 77 gcaggtacctgataagccagcctatgtgaagagatgtcaaaaataaatctttttttttct 136
||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 862 gcaggtacctgataagccagcctatgtgaagagatgtcaaaaaaaaatc-ttttttttct 804
Query: 137 ccttttgcctgccactagataggtgctgcccacttttgtggtgggtcatccaacttctag 196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 ccttttgcctgccactagataggtgctgcccacttttgtggtgggtcatccaacttctag 744
Query: 197 taattggagctagaaaaataattccaggagagtctagaagctcatctttttcttgattcc 256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 taattggagctagaaaaataattccaggagagtctagaagctcatctttttcttgattcc 684
Query: 257 acatcgggtaaaagttgacaatttactatcaatttactatcgcttctctctcctttttct 316
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 acatccggtaaaagttgacaatttactatcaatttactatcgcttctctctcctttttct 624
Query: 317 ccttttttttttcaaatttaaatatgtcattgttagtcttataccctacctagaacagcc 376
|| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 623 cc--ttttttttcaaatttaaatatgtcattgttagtcttataccctacgtagaacagcc 566
Query: 377 tagtaactctgcttgatcttggtcagcatgaacatgtataagtatgtgacccagagaatt 436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tagtaactctgcttgatcttggtcagcatgaacatgtataagtatgtgacccagagaatt 506
Query: 437 ctatgaaattagaggacagtaccttgta 464
||||||||||||||||||||||||||||
Sbjct: 505 ctatgaaattagaggacagtaccttgta 478
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 464
Length of database: 862
Length adjustment: 10
Effective length of query: 454
Effective length of database: 852
Effective search space: 386808
Effective search space used: 386808
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no055_m18.g1 MSMg01no055_m18.g1 CHROMAT_FILE:
MSMg01no055_m18.g1 PHD_FILE: MSMg01no055_m18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:57:18 2005
(324 letters)
>mm_chr17_91197440_91198163
Length = 724
Score = 580 bits (300), Expect = e-170
Identities = 318/324 (98%)
Strand = Plus / Plus
Query: 1 tgtttcttgtgcattttcttgggctcttttccttctgtttgctttgcccacttcagatgt 60
|||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||
Sbjct: 201 tgtttcttgtgcattttcttggactcttttccttctgtttgctttgcccaattcagatgt 260
Query: 61 attagtttttgttttgccttattttattgtatttctatcccgtatttgttttctaatgag 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attagttttcgttttgccttattttattgtatttctatcccgtatttgttttctaatgag 320
Query: 121 agagaagaagggagtgaatctggaggaacagggggagtagagggaaagggaactttaatc 180
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agagaggaagggagtgaatctggaggaacagggggagtagagggaaagggaactttaatc 380
Query: 181 aagatatattgagtgagcatgaaaaatccatttttagtaagaggaaaaaaacagcaaaaa 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 381 aagatatattgagtgagcatgaaaaatccatttttagtaagaggaaaaaaacagtaaaaa 440
Query: 241 ttaaatgtgtcttgaaattaacctttgacacatatttcttaccatataaaaccaatctat 300
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttaaatgtgtcatgaaattaacctttgacacatatttcttaccatataaaaccaatctat 500
Query: 301 agcaactgaagtaaaaacaagaaa 324
||||||||||||||||||||||||
Sbjct: 501 agcaactgaagtaaaaacaagaaa 524
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 324
Length of database: 724
Length adjustment: 9
Effective length of query: 315
Effective length of database: 715
Effective search space: 225225
Effective search space used: 225225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
