Query= MSMg01no057_a15.b1 MSMg01no057_a15.b1 CHROMAT_FILE:
MSMg01no057_a15.b1 PHD_FILE: MSMg01no057_a15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:58:51 2005
(529 letters)
>mm_chr17_32894194_32895123
Length = 930
Score = 942 bits (487), Expect = 0.0
Identities = 517/529 (97%), Gaps = 5/529 (0%)
Strand = Plus / Plus
Query: 4 gaattctccctttacc---ttcttcacccagtcttgggtgtgtcttaatctttttctagt 60
|||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattctcccttga--gaattcttcacccagtcttgggtgtgtcttaatctttttctagt 261
Query: 61 aacctttgtgtttaaatctatagacaaaagaggaaagaagtagggaggaagagaggagga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 aacctttgtgtttaaatctatagacaaaagaggaaagaagtagggaggaagagaggagga 321
Query: 121 ggggacggcggaggagaaatttcttcttaagaaacacatagtgtagtatatcctttatcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 ggggacggcggaggagaaatttcttcttaagaaacacatagtgtagtatatcctttatcc 381
Query: 181 cagcactttgtttgtttacacaaggacccttttcattctcagaacttgacgacttttgag 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 382 cagcactttgtttgtttacacaaggacccttttcattctcagaacttgacgactcttgag 441
Query: 241 tggctggcctcttatccatatccttcctgctgttttctgaattaacccaatcaggaatag 300
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 442 tggctggcctcttatccatatccttcctgctgttttcagaattaacccaatcaggaatag 501
Query: 301 actatgaggttgaccatcagccaatgagaaacagctaagatccctcttgcattagaaatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 actatgaggttgaccatcagccaatgagaaacagctaagatccctcttgcattagaaatc 561
Query: 361 aaagacagaccacttgttggccatgtgtgcagtttgctagcccagtttgagtacatccac 420
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 aaagacagaggacttgttggccatgtgtgcagtttgctagcccagtttgagtacatccac 621
Query: 421 tttgcaaaaagaaattaccttgctttgttcctgtgtttctttgtacaatacagaaaatat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 tttgcaaaaagaaattaccttgctttgttcctgtgtttctttgtacaatacagaaaatat 681
Query: 481 tctttttccatagccaccaatgactggctcacatatttgatttttgggc 529
|||||||||| |||||||||||||||| |||||||||||||||||||||
Sbjct: 682 tctttttccacagccaccaatgactggttcacatatttgatttttgggc 730
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 529
Length of database: 930
Length adjustment: 10
Effective length of query: 519
Effective length of database: 920
Effective search space: 477480
Effective search space used: 477480
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no057_a15.g1 MSMg01no057_a15.g1 CHROMAT_FILE:
MSMg01no057_a15.g1 PHD_FILE: MSMg01no057_a15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:58:51 2005
(524 letters)
>mm_chr17_33028147_33029070
Length = 924
Score = 944 bits (488), Expect = 0.0
Identities = 512/520 (98%)
Strand = Plus / Minus
Query: 1 tcttgctctgaccctattcttaggaggaagaattaggaacggctcactgtgaattgttac 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 tcttgctctgaccccattcttaggaggaagaattaggaacggctcactgtgaattgttac 661
Query: 61 aagcaagaggacaaacttcgcttgcatgcacacagtcacccagacagggctagaacgcag 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 aagcaagagaacaaacttcgcttgcatgcacacagtcacccagacagggctagaacgcag 601
Query: 121 gggtctagagtgaaatcggcttgctaatttgcctaataaaacttgcatgccctgtcacta 180
||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 600 gggtctagagtgaaatctgcttgctaatttgcctaataaaacttgtatgccctgtcacta 541
Query: 181 gctctccaggacctgagccaagggctcgctggcctatccggagaaaggttaggctcgctg 240
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 gcgctccaggacctgagccaagggctcgctggcctatccggagaaaggttaggctcgctg 481
Query: 241 gcctatcatggtaaaggttattactttagtgcctgaagtgtccaatgagaagtacgcttc 300
|||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 480 gcctatcagggtaaaggttattactttagtgtctgaagtgtccaatgagaagtacgcttc 421
Query: 301 ttgcatgaggggctttgtctgaccgaggtctgtttccttaaaccccctccccagcccccc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 ttgcatgaggggctttgtctgaccgaggtctgtttccttaaaccccctccccagcccccc 361
Query: 361 aaattaggcatgtttgtgttatttggaagtatgtcctagatgctaggcctagatatcaga 420
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 360 aaattaggcatgtttgtgttatttggaagtatgtcctagatgccaggcctagatatcaga 301
Query: 421 gtcgccttcactgacagcaggagccgcaggagcacaccaggacactccggggctggaaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 gtcgccttcactgacagcaggagccgcaggagcacaccaggacactccggggctggaaat 241
Query: 481 ggtacgttcggcctgtgacttagatgtgggcaggatgctg 520
||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 ggtacgttcggcctgtgacttagatgtgggcaggatgctg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 524
Length of database: 924
Length adjustment: 10
Effective length of query: 514
Effective length of database: 914
Effective search space: 469796
Effective search space used: 469796
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
