Query= MSMg01no057_e04.b1 MSMg01no057_e04.b1 CHROMAT_FILE:
MSMg01no057_e04.b1 PHD_FILE: MSMg01no057_e04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:59:09 2005
(451 letters)
>mm_chr17_15462668_15463519
Length = 852
Score = 820 bits (424), Expect = 0.0
Identities = 442/448 (98%), Gaps = 1/448 (0%)
Strand = Plus / Minus
Query: 5 gaattcatttcacctcccttgatgtttagaatgggtgtcacctggctttctgggtct-aa 63
||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 652 gaattcatttcaccttatttgatgtttagaatgggtgtcacctggctttctgggtctaaa 593
Query: 64 aattaatggtctatagctcagggacttccctccctgagtcagagcctgttgagctgcttc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 aattaatggtctatagctcagggacttccctccctgagtcagagcctgttgagctgcttc 533
Query: 124 ctgagagcagttggcatctattctaaaccctcaggcccttgggctcaggctgctacaggc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 ctgagagcagttggcatctattctaaaccctcaggcccttgggctcaggctgctacaggc 473
Query: 184 caggtgagaaagtgaattcctgagtcaagcagtcctgcctccagcatggtaggaatttga 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 caggtgagaaagtgaattcctgagtcaagcagtcctgcctccagcatggtaggaatttga 413
Query: 244 agcttcaggccagaccaggaatgcagggcagagggagggagaaaactctagagggaagcg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 agcttcaggccagaccaggaatgcagggcagagggagggagaaaactctagagggaagcg 353
Query: 304 ggcacgggcttgtctctcacctgtcacaccacaggccaggggtctgggttgtcagcatca 363
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 352 ggcacgggcttgtctctcacctgtcacaccacgggccaggggtctgggttgtcagcatca 293
Query: 364 gcgaggggcacaggctgagagtgaccaggcaggcaggtggcagcctgtctgaatgtgtgg 423
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 gcgaggggcagaggctgagagtgaccaggcaggcaggtggcagcctgtctgaatgtgtgg 233
Query: 424 ctgtggtagttccctcctgtttctggga 451
||||||||||||||||||||||||||||
Sbjct: 232 ctgtggtagttccctcctgtttctggga 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 451
Length of database: 852
Length adjustment: 10
Effective length of query: 441
Effective length of database: 842
Effective search space: 371322
Effective search space used: 371322
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no057_e04.g1 MSMg01no057_e04.g1 CHROMAT_FILE:
MSMg01no057_e04.g1 PHD_FILE: MSMg01no057_e04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:59:09 2005
(393 letters)
>mm_chr17_15382786_15383578
Length = 793
Score = 729 bits (377), Expect = 0.0
Identities = 389/393 (98%)
Strand = Plus / Plus
Query: 1 ctaggtatctatgaaggacaaataaaaacacaaccagacctggaagcttttgtctgtcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctaggtatctatgaaggacaaataaaaacacaaccagacctggaagcttttgtctgtcac 260
Query: 61 ttcagcacctgtgagactgaagcaggaagattctctatgaatttgaggctagcctaggat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttcagcacctgtgagactgaagcaggaagattctctatgaatttgaggctagcctaggat 320
Query: 121 atagaatgagaccttgtctcagaagaaaaaaaaagtggaaaagcatatccacataaatac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atagaatgagaccttgtctcagaagaaaaaaaaagtggaaaagcatatccacataaatac 380
Query: 181 agacagtatcactatttataatcaaagagctccaattgcttcattatccatcaccaagag 240
||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||
Sbjct: 381 agacagtatcactatttataatcaaagggctccaattgcttcattattcatcaccaagag 440
Query: 241 aacaatgaaacactgtgtatcgggaaaagccaatgatgtgttagcatgtgacacaacatt 300
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agcaatgaaacactgtgtatcgggaaaagccaatgatgtgttagcatgtgacacaacatt 500
Query: 301 agtcttccacacatagctgactggaagaaagcgaacataaaagcccaggtcttgggacct 360
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agtctcccacacatagctgactggaagaaagcgaacataaaagcccaggtcttgggacct 560
Query: 361 catttacataaaatgtacagtgctcatttcgga 393
|||||||||||||||||||||||||||||||||
Sbjct: 561 catttacataaaatgtacagtgctcatttcgga 593
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 393
Length of database: 793
Length adjustment: 9
Effective length of query: 384
Effective length of database: 784
Effective search space: 301056
Effective search space used: 301056
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
