TTGCGGCGCTAAACGACTCCTATTTCCAGAAATGCGCGGAATTCACAGTG
AATCCCGTGACACACAGTGGAGCTTAGTGTCATCACAGTGGAGCATTTTG
ACACCACAGTGCAGCACTATGATTCCCAATGAGCACTGTGACACCAGAGT
GGAGCACTGTGTCAACTCAGTGGAGCACTGTGATACCACAGTTGAGCATG
TGACACCACAGTGGAGCACTGTGACACAGCAGTGGAGCACTGTGAAACAA
CAGTGGAGTATCTTGACAACACAGTAGAGCACAGGATACACACTGAACAC
TGTGACAACACAGTAGAACACTCTGACACCACAGTGGAACACTCTCTCAC
CGTAGTGGAGCAATGTGACACCCAATCAAAGAACTGTGACATCTCTGTGG
AGCAAGGTGACATAGTTGTGCACTGTGACAGCGCAGTGTAGCCTGTGACA
CCACAGTGGAGCACTTTGACACCAAACTGAGCATGGTGACACCACAGTCG
GTCACACTGTCACCACAGCGGAGCACTGTAACAGCACATTGAGCACTGTG
ACACCACAGTGGAGCACTCTCTAACCAGAGTGGAGCACTGAGACACCACA
GTGTCTTACTGTGAAACCACAGTGAAGCACTGTAACATCACAATGGAGCA
ATGTGAAATCATCGTGGAGCACTGTGACACCATAGCGTAGCGCAGTGAAC
ACTACAGAGGGGCTC

AGCGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXACTGAAAAACGTGAAAAATGAGAAATGCACACGG
TAGGACATGGAATATGGCGAGAAAACTGAAAATCACGGAGAATGCGAAAT
ACACACTTTAGTGAAATATGGCGAGGAAAACTGAAAAAGTAGGAAAATTT
ACAAATGTCCACTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATTAT
GGAAAATGAGAAACATCTACTAGACCACTTTAAAAATGACAAAATCACTG
AAAAACGTGAAAAATGATATTTGCATACTGTAGGACCTGGAATATGGCGA
GAAACCTGAAAATCACGGAGAATGAGAAAAACACACTTTAGGATGTGAAA
AATGGCAAGCAAAACTGATCAAGGTGGAAAATATATAAATGCCCACTGTA
GGACATGGAATATGGCAAGATAACTGATAATCATGGAAAATGAGAAACAT
CTAAATGACGACTTGTATAATGACTAATACTCTGACAAACGTGAACAATG
AGAAATGCACTCTATACGACACGCAACATGTCCTGAAAACCGACCATCAC
GGCAAAACGATAATACTCTTGTTTACGATGTGAAATAGGGCGATGTACAC
TTGAAAAAAGTGCAACTTTTATACATGTTCACTGATTGACATGGAATATG
CTCCGAAAACTGAATACCATGGAAG

Query= MSMg01no057_f23.b1 MSMg01no057_f23.b1 CHROMAT_FILE:
MSMg01no057_f23.b1 PHD_FILE: MSMg01no057_f23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:59:18 2005
         (509 letters)



>mm_chr17_3029583_3030494
          Length = 912

 Score =  128 bits (66), Expect = 1e-33
 Identities = 150/192 (78%), Gaps = 30/192 (15%)
 Strand = Plus / Minus

                                                                       
Query: 17  catcacagtggagcattttgacaccacagtgcagcactatgattc--c-caat-gagcac 72
           ||||||||||||||| | ||||||||||||| |||||| |||  |  | || | ||||||
Sbjct: 408 catcacagtggagcactgtgacaccacagtggagcactgtga--cagcacagtggagcac 351

                                                                       
Query: 73  tgtgacaccagagtggagcactgtgtca------------------act---cagtggag 111
           ||||||||||||||||||||||||| ||                  |||   ||| ||||
Sbjct: 350 tgtgacaccagagtggagcactgtgacaccagagtggattaatgtgacttcacaggggag 291

                                                                       
Query: 112 cactgtgataccacagttgagc-atgtgacaccacagtggagcactgtgacac-agcagt 169
            ||| ||| | |||||| |||| |||||||||||||||||||||||||||||| | ||||
Sbjct: 290 aactctgacagcacagtcgagcaatgtgacaccacagtggagcactgtgacacca-cagt 232

                       
Query: 170 ggagcactgtga 181
           ||||||||||||
Sbjct: 231 ggagcactgtga 220



 Score =  124 bits (64), Expect = 2e-32
 Identities = 146/178 (82%), Gaps = 13/178 (7%)
 Strand = Plus / Minus

                                                                       
Query: 25  tggagcattttgacaccacagtgcagcactatgattcccaa-----tg-agcactgtgac 78
           ||||||| | |||||||||| || |||||| |||    |||     || |||||| ||||
Sbjct: 505 tggagcagtgtgacaccacaatggagcactgtga----caaaagagtgtagcactttgac 450

                                                                       
Query: 79  accagagtggagcactgtgtcaactcagtggagcactgtgataccacagttgagca-tgt 137
           |||| ||||||||| |||| || | || | ||||||||||| | |||||| ||||| |||
Sbjct: 449 accacagtggagcagtgtgacaccacatttgagcactgtgacatcacagtggagcactgt 390

                                                                     
Query: 138 gacaccacagtggagcactgtgaca-cagcagtggagcactgtgaaacaacagtggag 194
           ||||||||||||||||||||||||| || |||||||||||||||| || | |||||||
Sbjct: 389 gacaccacagtggagcactgtgacagca-cagtggagcactgtgacaccagagtggag 333



 Score =  114 bits (59), Expect = 1e-29
 Identities = 114/133 (85%), Gaps = 10/133 (7%)
 Strand = Plus / Minus

                                                                       
Query: 67  gagcactgtgacaccagagtggagcactgtgtcaactcag--tggagcactgtgatacca 124
           ||||||||||||||||||||||||||||||| || | |||  ||||| |  |||| ||||
Sbjct: 156 gagcactgtgacaccagagtggagcactgtgaca-c-cagagtggagaagagtgagacca 99

                                                                       
Query: 125 cagttg-agcat-gtgacaccacagtggagcactgtgacacagcagtggagcactgtga- 181
           || ||| ||||| |||||||| |||| ||||| |||||||||  ||||||||||||||| 
Sbjct: 98  ca-ttggagcattgtgacacctcagttgagca-tgtgacacaaaagtggagcactgtgac 41

                        
Query: 182 aacaacagtggag 194
           |||| ||||||||
Sbjct: 40  aaca-cagtggag 29



 Score =  112 bits (58), Expect = 5e-29
 Identities = 408/542 (75%), Gaps = 69/542 (12%)
 Strand = Plus / Minus

                                                                       
Query: 2   agtggagcttagtgtcatcacagtggagcattttgacaccacagtgcagcacta-tgatt 60
           ||||||||| |||| |||||||||||||  || |||| |||||||| ||||| | ||| |
Sbjct: 735 agtggagctcagtgacatcacagtggag--ttgtgactccacagtggagcac-agtgact 679

                                                                       
Query: 61  cc-caat-gagc-actgtgacaccagagtggagcactgtgt--caactcagtggagcact 115
           || || | || | |||||||||||| ||| |||   |||||  || | ||||||||||||
Sbjct: 678 ccacagtgga-caactgtgacaccacagtagag--ttgtgtgacaccacagtggagcact 622

                                                                       
Query: 116 gtgataccaca---gttgagca-tgtgacaccacagtggagcactgtgac-acagcagtg 170
            |||   || |   || ||| | |||||||||| ||||||||||| ||||  || || ||
Sbjct: 621 atga---caaagacgtggagaattgtgacaccagagtggagcactctgactgca-cattg 566

                                                                       
Query: 171 gagcactgtgaaaca--acagtggagtatct-tgaca--acacagtagagcacag-gat- 223
           |||||| ||  ||||  |||||| || | || |||||  ||| ||  |||  ||| | | 
Sbjct: 565 gagcacagt--aacaccacagtgaagca-ctgtgacagtacagag--gag--cagtg-tg 514

                                                                       
Query: 224 acacac---t-gaacactgtgacaacacagtagaacactctgacaccacagtggaacact 279
           ||| ||   | || || ||||||| |||| | || |||| |||||  | |||| | ||||
Sbjct: 513 aca-acaaatggagcagtgtgacaccacaatggagcactgtgacaaaagagtgtagcact 455

                                                                       
Query: 280 ctct--caccgtagtggagcaatgtgacaccca-atcaaagaactgtgacatctctgtgg 336
            | |  ||||  ||||||||| ||||||| ||| ||   || ||||||||||| | ||||
Sbjct: 454 -t-tgacaccacagtggagcagtgtgaca-ccacatttgagcactgtgacatcacagtgg 398

                                                                       
Query: 337 agcaaggtga---catagttgtgcactgtgacagcgcagtgtagc-ctgtgacaccacag 392
           ||||  ||||   || ||| | ||||||||||||| ||||| ||| ||||||||||| ||
Sbjct: 397 agcactgtgacaccacagtggagcactgtgacagcacagtggagcactgtgacaccagag 338

                                                                       
Query: 393 tggagcactttgacaccaaactg----agcatggtgacaccacagtcgg----tcacact 444
           ||||||||| |||||||| | ||    |  || |||||  |||||  ||      || ||
Sbjct: 337 tggagcactgtgacaccagagtggatta--at-gtgacttcacag--gggaga--actct 285

                                                                       
Query: 445 gtcaccacag-cggagcactgtaacagcaca-ttgagcactgtgacaccacagtggagca 502
           | || ||||| | ||||| ||| ||| |||| | ||||||||||||||||||||||||||
Sbjct: 284 gacagcacagtc-gagcaatgtgacaccacagtggagcactgtgacaccacagtggagca 226

             
Query: 503 ct 504
           ||
Sbjct: 225 ct 224



 Score = 95.5 bits (49), Expect = 8e-24
 Identities = 145/191 (75%), Gaps = 32/191 (16%)
 Strand = Plus / Minus

                                                                       
Query: 1   cagtggag--cttagtgtcatcacagtggagcattttgacaccacagtgcagcactatga 58
           ||||||||  ||  ||| || |||||||||||| | ||||| ||||||| |||||| |||
Sbjct: 403 cagtggagcact--gtgacaccacagtggagcactgtgacagcacagtggagcactgtga 346

                                                                       
Query: 59  ttc-cca-a-t-gagcactgtgacaccagagtggagcactgtg---tc---------aac 102
             | ||| | | |||||||||||||||||||||||  | ||||   ||         |||
Sbjct: 345 --caccagagtggagcactgtgacaccagagtggattaatgtgacttcacaggggagaac 288

                                                                       
Query: 103 t---------cagtggagcactgtgataccacagttgagca-tgtgacaccacagtggag 152
           |         |||| ||||| ||||| |||||||| ||||| ||||||||||||||||||
Sbjct: 287 tctgacagcacagtcgagcaatgtgacaccacagtggagcactgtgacaccacagtggag 228

                      
Query: 153 cactgtgacac 163
           |||||||||||
Sbjct: 227 cactgtgacac 217


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 86
Number of extensions: 7
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 6
Number of HSP's successfully gapped: 6
Length of query: 509
Length of database: 912
Length adjustment: 10
Effective length of query: 499
Effective length of database: 902
Effective search space:   450098
Effective search space used:   450098
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)