NCGATTTNNNNNNAAACATTGGGCGCTAXXXXXXXXXXXXXXXXXXXXXX
XXCGCGGAATTCAATGAAAATGAAGGCCCTTTAACTCCCCCTTATGGGAC
ACAATGACAACGGGGCTCTTTAAAAAACCCAAGGCCATGAATGCCTCCAA
AAGGAAACTGGAGAGAACATACACTAGCAGCTTAATGGCACATCTGAAAG
CTCTAAAAGTTGAGCAGGAAATAATAAAAATGAGGCCTGAAGTCAACCAA
CTCAAGTAAAAGCAAAAAGAATTTAGGAAACAAACAAACAAACAAGATCT
GGTTCTTTAAGAAAATTAACAAGATATAAACACCTAGCGACACTAATCAG
AGGGTAAAGATACAGAATCAAAATTAGTGAAATCAGAAATGAAAAGGGGA
CATAATTTCAAAAACCAAGTAAATCCAGAAAATCATCAGATCCTACTACA
AAGCATATATTTAACAAAACTGGAAAATCTGGATGATATGGAAAATTTTC
TAGACAGATATCAAGTATCAAAGTTAAATCAGGATCAGCTAAACCATCTA
AACAGTCCCATATCCCCTAAAGAATTAAAATCTCCCAACGAAAAGAAAAA
GCCCCGGACCAGATGGGTTTAGTGCAGAATTCTATTAGACTTTCAAAGAA
GACCTAATAACAATACTCTTCTAACTATTCCACAAAGTCGAAACAGAAGG
AACACTACCCAATTTGTTCTATGAAGCCACATTTATGCTTACACGTAAAC
AACACAAAGACCCAATTAAAAAAGAGAATTTCAGACCAATTTCCCTTATG
AATATCAATGTAAAAATACTCAATAAAATTTTTATAAACCAAATCTAAGA
ACACATCAAAATGAACATTCAGCATGATCAAGTAGCCTTCGTTCCAGGGA
TGTAGGAATATTTTAATATACAGAAATATANTCACATAATCCACTATATA
AACAAGCTCCCAGAAATAAAACCACCAGATCATTTCATTAGATGCTGAAA
AAAAAATTGACAAAATTCAACATTCCTACCCAGTAAAAGTCTGGGAAAGT
TGAAGGAATTTAGAACCTTACCTAAACACCGGTAAAAGCATATATTGCAA
AACCAGTAGCCCACATTCTACCTAAATGGGAAAGAAACTTGAAGCAACTC
CCCTTAAATACCAGGGAATTGGAAA

CATTTATTNNNNNTAGCAGTGAGGCTGGGGCGCCXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXCCCTTAAAATCACAAAACTTTGAAAAT
GGATAGAATTTCTCCTTTAATTCTTTGAGATTCCGAATTCTTAATACTAT
ATTTCATGACCTGCACAGAGAAATATAAATGTCTATGAAACTGTTTTTTT
TCTATCAACAAATAAGCAAAATCCCAAACAGTTCCCATTGCAGGCCACCT
ATCAAGGGGTTCCACAGGTACCTCGCCACACAAGACTCTTGCTGCTTTGA
AAGAATTAGTCAATTGAAGTTTATTTCCTTTTTCTCTATTCCATTGTTTT
CAGTCTGAACATATTGATCCCAAAGTTTCACATAGCTCAGGTTAAATTAA
CTTGAGGACAATTTTTGAAAATGCAAAATCACTCTCCTTTTTCATGGCTG
TCATTATGTATATTTGCCAAAAGATCAATCTTTTAATTACATCGAGCCTC
CCTCTTTGTAGTTTTTGGTAATGAGAAGTGTACTGGGTACTGATGAGACA
AATAAAAAGGTGAGACAAACCCTACTAATGCTCCTTTGGAATGTGAAGTT
TTTGGGGCTTGAACAGATCCTGGCATTTTCAGGACATATCAAGTTGGCAA
TGGAATTTCATCAGACACATTCATGACTTCACATTTCATAGCAGGGCTAG
AATATTGTGATTCTTATGTGATGAGAATTATGTTCATTGTGTTAAACACA
ATATACACTGAGGCTGTATAGGCATGAATTTTTTGCAACCAACTTTTAAT
AAAGGTACAACCTCTCTGCTAGCCCACCATCCAGCAGAGGTAGTGGAAGA
GAAAAGTTATGATATTTGGGGGAATTCAGCAATAGTTCTTTGGGGGCAAA
CTTTATCTTCTTTGGAAGCAGTTCAGTCCCATATCAAACACCAAATATGA
CTCAGTAGCTGCAGAGCAGTCCTTCTAAAAAGGCAGACACCCAGCATGTA
CCAGCAGCTGTAGTGCAAATCCTGAAAAAACTGAAAAGGCTCCTTAATTC
CACTTGAAGCCCTAAAAAGCAAAAAAGCTTCTCCCGGGCCCCTCAAAAAA
AAATATTTTGGAAAGGTTTCCCCTGGGAACCTCCCCAATGGGAAA

Query= MSMg01no062_d12.g1 MSMg01no062_d12.g1 CHROMAT_FILE:
MSMg01no062_d12.g1 PHD_FILE: MSMg01no062_d12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:05:35 2005
         (752 letters)



>mm_chr17_90145744_90146900
          Length = 1157

 Score = 1398 bits (723), Expect = 0.0
 Identities = 747/757 (98%), Gaps = 5/757 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   aaactttgaaaatggatagaatttctcctttaattctttgagattccgaattcttaatac 60
           ||||||||||||||||||||||||||| |||||||||||||||||  |||||||||||||
Sbjct: 884 aaactttgaaaatggatagaatttctcatttaattctttgagattttgaattcttaatac 825

                                                                       
Query: 61  tatatttcatgacctgcacagagaaatataaatgtctatgaaactg-ttttttttctatc 119
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 824 tatatttcatgacctgcacagagaaatataaatgtctatgaaactgtttttttttctatc 765

                                                                       
Query: 120 aacaaataagcaaaatcccaaacagttcccattgcaggccacctatcaaggggttccaca 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 764 aacaaataagcaaaatcccaaacagttcccattgcaggccacctatcaaggggttccaca 705

                                                                       
Query: 180 ggtacctcgccacacaagactcttgctgctttgaaagaattagtcaattgaagtttattt 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 ggtacctcgccacacaagactcttgctgctttgaaagaattagtcaattgaagtttattt 645

                                                                       
Query: 240 cctttttctctattccattgttttcagtctgaacatattgatcccaaagtttcacatagc 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 cctttttctctattccattgttttcagtctgaacatattgatcccaaagtttcacatagc 585

                                                                       
Query: 300 tcaggttaaattaacttgaggacaatttttgaaaatgcaaaatcactctcctttttcatg 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 tcaggttaaattaacttgaggacaatttttgaaaatgcaaaatcactctcctttttcatg 525

                                                                       
Query: 360 gctgtcattatgtatatttgccaaaagatcaatcttttaattacatcgagcctccctctt 419
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 524 gctgtcattatgtatatttgccaaaagatcaatcttttaattacattgagcctccctctt 465

                                                                       
Query: 420 tgtagtttttggtaatgagaagtgtactgggtactgatgagacaaataaaaaggtgagac 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 tgtagtttttggtaatgagaagtgtactgggtactgatgagacaaataaaaaggtgagac 405

                                                                       
Query: 480 aaaccctactaatgctcctttggaatgtgaagtttttggggcttgaacagatcctggcat 539
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 404 aaaccctactaatgctcctttggaatgtgaagtttttgggtcttgaacagatcctggcat 345

                                                                       
Query: 540 tttcaggacatatcaagttggcaatggaatttcatcaga----cacattcatgacttcac 595
           |||||||||||||||||||||||||||||||||||||||    |||||||||||||||||
Sbjct: 344 tttcaggacatatcaagttggcaatggaatttcatcagacactcacattcatgacttcac 285

                                                                       
Query: 596 atttcatagcagggctagaatattgtgattcttatgtgatgagaattatgttcattgtgt 655
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 atttcatagcagggctagaatattgtgattcttatgtgatgagaattatgttcattgtgt 225

                                                                       
Query: 656 taaacacaatatacactgaggctgtataggcatgaattttttgcaaccaacttttaataa 715
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 taaacacaatatacactgaggctgtataggcatgaattttttgcaaccaacttttaataa 165

                                                
Query: 716 aggtacaacctctctgctagcccaccatccagcagag 752
           |||||||||||||||||||||||||||||||||||||
Sbjct: 164 aggtacaacctctctgctagcccaccatccagcagag 128


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 752
Length of database: 1157
Length adjustment: 10
Effective length of query: 742
Effective length of database: 1147
Effective search space:   851074
Effective search space used:   851074
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)