Query= MSMg01no063_o16.b1 MSMg01no063_o16.b1 CHROMAT_FILE:
MSMg01no063_o16.b1 PHD_FILE: MSMg01no063_o16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:08:28 2005
(316 letters)
>mm_chr17_31003112_31003827
Length = 716
Score = 455 bits (235), Expect = e-132
Identities = 304/351 (86%), Gaps = 39/351 (11%)
Strand = Plus / Minus
Query: 5 gaattcctagaacggcagcagtctgactctgaagcaagctgatttctgccgcttgactcg 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 gaattcctagaacgggagcagtctgactctgaagcaagctgatttctgccgcttgactcg 376
Query: 65 tgcaatcacctggcctaaggagagacgtggtgtgttttaagtggtgttccctacagggtc 124
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 tgcaatcagctggcctaaggagagacgtggtgtgttttaagtggtgttccctacagggtc 316
Query: 125 ctagaaaagctggaaggagcagctgagcagggtggctgtgtttctcagctttacagagaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 ctagaaaagctggaaggagcagctgagcagggtggctgtgtttctcagctttacagagaa 256
Query: 185 ctggctagcattctgtaatgattgtcctgtgtcaggagcgggtgggc------------- 231
|||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 255 ctggctagcattctgtaatgatggtcctgtgtcaggagcgggtgggcgtgtgtgtgtgtt 196
Query: 232 --------------gtgtgagagagacagacagacagagagagagaga--------caga 269
|||||||||||| ||| ||| ||||||||||||| ||||
Sbjct: 195 gtgtgtgtgtgtgtgtgtgagagagagagagagagagagagagagagagagaggcgcaga 136
Query: 270 cag----agatagagacagagagggacagagagagagaaagagagacagag 316
|| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 gagagacagacagagacagagagggacagagagagagaaagagagacagag 85
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 716
Length adjustment: 9
Effective length of query: 307
Effective length of database: 707
Effective search space: 217049
Effective search space used: 217049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no063_o16.g1 MSMg01no063_o16.g1 CHROMAT_FILE:
MSMg01no063_o16.g1 PHD_FILE: MSMg01no063_o16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:08:28 2005
(280 letters)
>mm_chr17_30863953_30864632
Length = 680
Score = 526 bits (272), Expect = e-154
Identities = 278/280 (99%)
Strand = Plus / Plus
Query: 1 acccaccctcgttttcacagaacaagcatggtgtttgaggagtgatatgtaatgttctat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acccaccctcgttttcacagaacaagcatggtgtttgaggagtgatatgtaatgttctat 260
Query: 61 gcacctcctacaatacacatgcacacacatgaatgcatgcgtgcatacttacctacaaaa 120
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcacctcctacaacacacatgcacacacatgaatgcatgcgtgcatacttacctacaaaa 320
Query: 121 cacgatggtaaaatgtcctattccgtatgtctttaaagccactggcctcacacagtccag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cacgatggtaaaatgtcctattccgtatgtctttaaagccactggcctcacacagtccag 380
Query: 181 gaaaggtggcatgcaacagtccctattcactaagcccgtgaccttgcctagctcttggtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaaaggtggcatgcaacagtccctattcactaagcccgtgaccttgcctagctcttggtt 440
Query: 241 ttctggtgaatcttggtttttgaactgtgaatggagacac 280
||||||||||||||||||||||||||||||||| ||||||
Sbjct: 441 ttctggtgaatcttggtttttgaactgtgaatgaagacac 480
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 280
Length of database: 680
Length adjustment: 9
Effective length of query: 271
Effective length of database: 671
Effective search space: 181841
Effective search space used: 181841
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
