Query= MSMg01no065_p07.b1 MSMg01no065_p07.b1 CHROMAT_FILE:
MSMg01no065_p07.b1 PHD_FILE: MSMg01no065_p07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:11:36 2005
(339 letters)
>mm_chr17_14280638_14281376
Length = 739
Score = 648 bits (335), Expect = 0.0
Identities = 338/339 (99%)
Strand = Plus / Plus
Query: 1 ttttccactcgtcagtggtgctagggctgggtcctggctgtggccttccttgtgttagca 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttttccactcgtcagtggtgctggggctgggtcctggctgtggccttccttgtgttagca 260
Query: 61 acacacatccagtcaggaccttacatactcatggtttcctctgctccccacacctagtcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acacacatccagtcaggaccttacatactcatggtttcctctgctccccacacctagtcc 320
Query: 121 cctgcccatgcttcttggcagccattaggtgagcaccccctccttatcttcccacccctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctgcccatgcttcttggcagccattaggtgagcaccccctccttatcttcccacccctg 380
Query: 181 ccatgtttctatcttgagcagatccaaaagcagctgagtcccatgtacatggcctggaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccatgtttctatcttgagcagatccaaaagcagctgagtcccatgtacatggcctggaac 440
Query: 241 tcctgaaatcagggggcaagatgagtgcctcctccctttcatgtttatgtcaggtattca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcctgaaatcagggggcaagatgagtgcctcctccctttcatgtttatgtcaggtattca 500
Query: 301 gccacggtgacagaaagcatttataggcgtggtgacaaa 339
|||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gccacggtgacagaaagcatttataggcgtggtgacaaa 539
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 339
Length of database: 739
Length adjustment: 9
Effective length of query: 330
Effective length of database: 730
Effective search space: 240900
Effective search space used: 240900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no065_p07.g1 MSMg01no065_p07.g1 CHROMAT_FILE:
MSMg01no065_p07.g1 PHD_FILE: MSMg01no065_p07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:11:36 2005
(229 letters)
>mm_chr17_14369092_14369721
Length = 630
Score = 337 bits (174), Expect = 5e-97
Identities = 216/230 (93%), Gaps = 1/230 (0%)
Strand = Plus / Minus
Query: 1 atagggtgggaacattgttcttggc-gggaccccatgtgaacaccttcagagtgtgtcac 59
||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 430 atagggtgggaacatcaatcttggcagggaccccatgtgaacaccttcagagtgtgtcac 371
Query: 60 aactgctggcctgctcatgaaagtataggcacattgcgctgtgtgctcgtgacacccagt 119
|||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||||||
Sbjct: 370 aactgctgccctgctcatgaaagtgtaggcacattgcggtgtgtgctcgtgacacccagt 311
Query: 120 ccaatatggcacctctgtgcaggactggtagagagaacgcaggcctgattcctttttcct 179
|||||| ||| ||||||||||||||||| |||||||||||||||| | || |||| ||||
Sbjct: 310 ccaatacggcgcctctgtgcaggactgggagagagaacgcaggcccgttttctttctcct 251
Query: 180 aacaaattctctaacttaaactgtctctgagggttccctggtaatccaga 229
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 aacaaattctctaacttaaactgtctctgagggttccctggtaatccaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 229
Length of database: 630
Length adjustment: 9
Effective length of query: 220
Effective length of database: 621
Effective search space: 136620
Effective search space used: 136620
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
