Query= MSMg01no066_g13.b1 MSMg01no066_g13.b1 CHROMAT_FILE:
MSMg01no066_g13.b1 PHD_FILE: MSMg01no066_g13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:12:11 2005
(181 letters)
>mm_chr17_20334566_20335146
Length = 581
Score = 275 bits (142), Expect = 1e-78
Identities = 167/180 (92%), Gaps = 9/180 (5%)
Strand = Plus / Minus
Query: 4 ggaattctacaatattacccacatcccaagacacaaagcatatatattccatgtagaata 63
|||||||||| |||| | |||||||||||||||||||| |||||||||||||||||||||
Sbjct: 330 ggaattctaccatatgaaccacatcccaagacacaaagtatatatattccatgtagaata 271
Query: 64 ccttcacaaaccttactcttaaacttgaatttctgtcctcctttcctagtttgtctctca 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 ccttcacaaaccttactcttaaacttgaatttctgtcctcctttcctagtttgtctctca 211
Query: 124 ttgcctcttttttttttttttttttttt--cttgctctctgtttaactaacttctctctg 181
||||||| |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 210 ttgcctc-------ttttttttttttttaacttgctctctgtttaactaacttctctctg 158
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 181
Length of database: 581
Length adjustment: 8
Effective length of query: 173
Effective length of database: 573
Effective search space: 99129
Effective search space used: 99129
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no066_g13.g1 MSMg01no066_g13.g1 CHROMAT_FILE:
MSMg01no066_g13.g1 PHD_FILE: MSMg01no066_g13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:12:11 2005
(172 letters)
>mm_chr17_20142741_20143311
Length = 571
Score = 317 bits (164), Expect = 2e-91
Identities = 170/172 (98%), Gaps = 1/172 (0%)
Strand = Plus / Plus
Query: 1 ctagtagcaatcactgacttagacatggcaatagataccagtactatatttatggaagga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctagtagcaatcactgacttagacatggcaatagataccagtactatatttatggaagga 260
Query: 61 acacacattggctctttccagacataaggagaaatatcacacttttatcaaggagatacc 120
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acacacattg-ctctttccagacataaggagaaatatcacacttttatcaaggagatacc 319
Query: 121 ttcttcaaacttctgatggattatgcctgtcgcctaattcactgaccttggg 172
||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 320 ttcttcaaacttctgatggattatgcctgtcgcctaaatcactgaccttggg 371
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 172
Length of database: 571
Length adjustment: 8
Effective length of query: 164
Effective length of database: 563
Effective search space: 92332
Effective search space used: 92332
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
