Query= MSMg01no071_l21.b1 MSMg01no071_l21.b1 CHROMAT_FILE:
MSMg01no071_l21.b1 PHD_FILE: MSMg01no071_l21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:19:15 2005
(344 letters)
>mm_chr17_50930020_50930763
Length = 744
Score = 642 bits (332), Expect = 0.0
Identities = 341/344 (99%)
Strand = Plus / Minus
Query: 1 atggaggcccattctcttgcctgctgtcaaccagtgaccgttgccggcttctgaaagatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 atggaggcccattctcttgcctgctgtcaaccagtgaccgttgccggcttctgaaagatg 311
Query: 61 tcttatctctagatcctactctagttttttcagtatacgaagtaccaggtcaaggcccac 120
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 310 tcttatctctagatcctactctagttttttcagtatacgaagcaccaggtcaaggcccac 251
Query: 121 ttaagctcctgcttctcattttcttcagatacagccgagaaactgtgaagtctctgagtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 ttaagctcctgcttctcattttcttcagatacagccgagaaactgtgaagtctctgagtt 191
Query: 181 gcttctctcccttcctcatttatttttaggactcatggttagacggcccagaagtgacag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 gcttctctcccttcctcatttatttttaggactcatggttagacggcccagaagtgacag 131
Query: 241 tccaaaatatcctatccacgaaatcctaccttactcagacctgcagcatctcctgccata 300
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 tccaaaataccctatccacgaaatcctaccttactcagacctgcagcatctcctgccata 71
Query: 301 ttggttgcacagtcatgggtcctgggagtctaggaagtggacat 344
|||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 70 ttggttgcacagtcatgggtcctgggagtcaaggaagtggacat 27
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 744
Length adjustment: 9
Effective length of query: 335
Effective length of database: 735
Effective search space: 246225
Effective search space used: 246225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no071_l21.g1 MSMg01no071_l21.g1 CHROMAT_FILE:
MSMg01no071_l21.g1 PHD_FILE: MSMg01no071_l21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:19:15 2005
(256 letters)
>mm_chr17_50768445_50769101
Length = 657
Score = 474 bits (245), Expect = e-138
Identities = 254/257 (98%), Gaps = 1/257 (0%)
Strand = Plus / Plus
Query: 1 catataaaatcgagtgttattgctgtgcaagctgcaatctagtgcataagaggttcggga 60
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catataaaatggagtgttattgctgtgcaagctgcaatctagtgcataagaggttcggga 260
Query: 61 cgtgccgtggcttggatgaaggtttt-gtgccatgaaagtctcttctagtccctgaaaac 119
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 261 cgtgccgtggcttggatgaaggtttttgtgccatgaaagtctcttctagtccctgaaaac 320
Query: 120 cacccatggatgatataaaaggttagagcagattggaaaggtagagaattcttagctttc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cacccatggatgatataaaaggttagagcagattggaaaggtagagaattcttagctttc 380
Query: 180 tgggatgggaccaggggctactcacaactcccaatccactgcatattgacttatcactgg 239
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgggctgggaccaggggctactcacaactcccaatccactgcatattgacttatcactgg 440
Query: 240 acatcatctcccgcaag 256
|||||||||||||||||
Sbjct: 441 acatcatctcccgcaag 457
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 256
Length of database: 657
Length adjustment: 9
Effective length of query: 247
Effective length of database: 648
Effective search space: 160056
Effective search space used: 160056
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
