Query= MSMg01no072_g13.b1 MSMg01no072_g13.b1 CHROMAT_FILE:
MSMg01no072_g13.b1 PHD_FILE: MSMg01no072_g13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:20:09 2005
(395 letters)
>mm_chr17_42466186_42466980
Length = 795
Score = 669 bits (346), Expect = 0.0
Identities = 367/374 (98%)
Strand = Plus / Minus
Query: 22 caacatttgggctgtaaaaaataaaataatgaatttaaaatgttaaagctgatgaagaaa 81
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 467 caacatttgggctgtaaaaaataaaataatgaatttaaaacgttaaagctgatgaagaaa 408
Query: 82 gtgctaggtgttagaagttcaacagaagggtgggtattagtgaatattatttttttttta 141
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 407 gtgctaggtgttagaagttcaacagaagggtgggtattagtgaatattattattttttta 348
Query: 142 cacgaaagaatggaaggacaaagaggttgagtaatgtattcaaaggtacacaatgttaaa 201
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 cacggaagaatggaaggacaaagaggttgagtaatgtattcaaaggtacacaatgttaaa 288
Query: 202 aatggaatcgaacataagttcgctcgattttttccttcattattttagatattactatgg 261
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 287 aatggaattgaacataagttcgctcgattttttccttcattattttagatattactctgg 228
Query: 262 gagtgtgggtatggcggtgcatgcctctagttactacactcatggaaacaggaaagttag 321
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 gagtgtgggtatggtggtgcatgcctctagttactacactcatggaaacaggaaagttag 168
Query: 322 aagttcaaggccattttacataccataatgagttcaaggctgggctggactataaaactc 381
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 aagttcaaggccgttttacataccataatgagttcaaggctgggctggactataaaactc 108
Query: 382 caattcacacaaac 395
||||||||||||||
Sbjct: 107 caattcacacaaac 94
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 395
Length of database: 795
Length adjustment: 9
Effective length of query: 386
Effective length of database: 786
Effective search space: 303396
Effective search space used: 303396
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no072_g13.g1 MSMg01no072_g13.g1 CHROMAT_FILE:
MSMg01no072_g13.g1 PHD_FILE: MSMg01no072_g13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:20:09 2005
(334 letters)
>mm_chr17_42300639_42301373
Length = 735
Score = 625 bits (323), Expect = 0.0
Identities = 332/335 (99%), Gaps = 1/335 (0%)
Strand = Plus / Plus
Query: 1 ttgggcaaaaagtg-caccaatagtgccttgttttctgagttcttcctgttaaaaacagt 59
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttgggcaaaaagtggcaccaatagtgccttgttttctgagttcttcctgttaaaaacagt 260
Query: 60 ttgtcagtttttaaaaataaagtattgcttaataacagatacaatgaatgaccacatccc 119
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgtcactttttaaaaataaagtattgcttaataacagatacaatgaatgaccacatccc 320
Query: 120 caaatttaagtcaagcatatttttatcttcagtgttgccaagagactttttgttagcaac 179
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 321 caaatttaagtcaagcatatttttatcttcagtgttgccaagacactttttgttagcaac 380
Query: 180 agttgacttgtaaataagtttaattttgatcctatgttatttgggtgagataagtcttta 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agttgacttgtaaataagtttaattttgatcctatgttatttgggtgagataagtcttta 440
Query: 240 cctagtaatataaataatactccaagtttgcaaatggtaccttgacttgcccctcccttt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cctagtaatataaataatactccaagtttgcaaatggtaccttgacttgcccctcccttt 500
Query: 300 atattttcataattactttccatttgactctttta 334
|||||||||||||||||||||||||||||||||||
Sbjct: 501 atattttcataattactttccatttgactctttta 535
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 334
Length of database: 735
Length adjustment: 9
Effective length of query: 325
Effective length of database: 726
Effective search space: 235950
Effective search space used: 235950
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
