Query= MSMg01no072_k04.b1 MSMg01no072_k04.b1 CHROMAT_FILE:
MSMg01no072_k04.b1 PHD_FILE: MSMg01no072_k04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:20:26 2005
(376 letters)
>mm_chr17_9528596_9529371
Length = 776
Score = 690 bits (357), Expect = 0.0
Identities = 369/373 (98%)
Strand = Plus / Plus
Query: 4 gaattcaaatgatgacctttaattgtaagcctcctctaaatgtttattttatcttcaaat 63
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattcaaatgatgaattttaattgtaagcctcctctaaatgtttattttatcttcaaat 263
Query: 64 aagcttaactattgagggttgggttgactggagtcttcaagtgcttcagaccttctctta 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 aagcttaactattgagggttgggttgactggagtcttcaagtgcttcagaccttctctta 323
Query: 124 ttctgttaactactaaaaggtccctcctggcaacttctagcctgtcctcatggcaggtat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ttctgttaactactaaaaggtccctcctggcaacttctagcctgtcctcatggcaggtat 383
Query: 184 ggtggcttgaacattccaatgagcagatacccagaggaagtcagaaacacttcaagcagg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ggtggcttgaacattccaatgagcagatacccagaggaagtcagaaacacttcaagcagg 443
Query: 244 gctcctgctgaagactcagcttctgaatctggaaccctctgtccagtcaaggtggcttca 303
||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 444 gctcctgctgaagtctcagcttctgaatctggaaccctctgtccagtcaaggtggtttca 503
Query: 304 gctaacctcaaacaaagttcagtccttcacttcagcatggtaaatcttggtactgctagg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gctaacctcaaacaaagttcagtccttcacttcagcatggtaaatcttggtactgctagg 563
Query: 364 ttgtcctgatgca 376
|||||||||||||
Sbjct: 564 ttgtcctgatgca 576
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 376
Length of database: 776
Length adjustment: 9
Effective length of query: 367
Effective length of database: 767
Effective search space: 281489
Effective search space used: 281489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no072_k04.g1 MSMg01no072_k04.g1 CHROMAT_FILE:
MSMg01no072_k04.g1 PHD_FILE: MSMg01no072_k04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:20:26 2005
(344 letters)
>mm_chr17_9723633_9724376
Length = 744
Score = 654 bits (338), Expect = 0.0
Identities = 341/342 (99%)
Strand = Plus / Minus
Query: 1 agtctatatgattgctttgtgtttcaccctttgatagacttagagatgtgtagtgctgtg 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 412 agtctatatgattgctttgtgcttcaccctttgatagacttagagatgtgtagtgctgtg 353
Query: 61 aattatctgatggctgttgcttgttaaagacaacatctatatccaggcaaggctgctctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 aattatctgatggctgttgcttgttaaagacaacatctatatccaggcaaggctgctctt 293
Query: 121 acagcatacaaaagtaataatgcatagatggtgacaattctgaggatattgacttactaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 acagcatacaaaagtaataatgcatagatggtgacaattctgaggatattgacttactaa 233
Query: 181 aagtggcagctttacatgaagataaaccatcagataaggacacttgctgccaaatctgac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 aagtggcagctttacatgaagataaaccatcagataaggacacttgctgccaaatctgac 173
Query: 241 aatggaaatttggtccctgcgactcacatggtggaaagagagaactgactcctgcaagtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 aatggaaatttggtccctgcgactcacatggtggaaagagagaactgactcctgcaagtt 113
Query: 301 gctctgtaacttccacatgttttagcacaccccttcaatcag 342
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112 gctctgtaacttccacatgttttagcacaccccttcaatcag 71
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 744
Length adjustment: 9
Effective length of query: 335
Effective length of database: 735
Effective search space: 246225
Effective search space used: 246225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
