Query= MSMg01no076_b01.b1 MSMg01no076_b01.b1 CHROMAT_FILE:
MSMg01no076_b01.b1 PHD_FILE: MSMg01no076_b01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:24:55 2005
(588 letters)
>mm_chr17_83211667_83212656
Length = 990
Score = 1091 bits (564), Expect = 0.0
Identities = 579/584 (99%), Gaps = 2/584 (0%)
Strand = Plus / Plus
Query: 7 gaattctccttatgtc-catgagttcagaaaagg-gccaaattacagtaatatttataca 64
|||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||
Sbjct: 207 gaattctccttatgtcaaatgagttcagaaaaggtgccaaattacagtaatatttataca 266
Query: 65 tcaacaccctgggggtgggttattactatcttctacaaagactgattcctcaatgacctt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 tcaacaccctgggggtgggttattactatcttctacaaagactgattcctcaatgacctt 326
Query: 125 tcggaaacagattttctctttaaacactctggcatatttaatttgaaggaattcaaagag 184
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 tcggaaacagatttcctctttaaacactctggcatatttaatttgaaggaattcaaagag 386
Query: 185 aaatgtaaccatcatatcaacaatatgttttcatatattacactacaaggtactcaagag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 aaatgtaaccatcatatcaacaatatgttttcatatattacactacaaggtactcaagag 446
Query: 245 tttaatccactctaaattcaaaattcactctaaagagttcaaaaccacggagacaggatt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 tttaatccactctaaattcaaaattcactctaaagagttcaaaaccacggagacaggatt 506
Query: 305 ctccttcattcaatgtgagacttacgacaaacaatcattaacagttaaaatgttttgcaa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 ctccttcattcaatgtgagacttacgacaaacaatcattaacagttaaaatgttttgcaa 566
Query: 365 gtgtcttacaaaagaaaccacatacacaccaaggaagataaggggtatgttctaggagtt 424
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 567 gtgtcttacaaaagaaaccacatacacaccaaggaagattaggggtatgttctaggagtt 626
Query: 425 cccatgggggagaagatctatagatttatatgttactgacataaaatccttttgataatc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 cccatgggggagaagatctatagatttatatgttactgacataaaatccttttgataatc 686
Query: 485 acagttgttttaaaataccgtgtttcaatgtcaactgtttatgattagttcaggattcaa 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 acagttgttttaaaataccgtgtttcaatgtcaactgtttatgattagttcaggattcaa 746
Query: 545 atactagcattgtctaagatcacttttatcaaagaacatataat 588
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 atactagcattgtctaagatcacttttatcaaagaacatataat 790
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 588
Length of database: 990
Length adjustment: 10
Effective length of query: 578
Effective length of database: 980
Effective search space: 566440
Effective search space used: 566440
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no076_b01.g1 MSMg01no076_b01.g1 CHROMAT_FILE:
MSMg01no076_b01.g1 PHD_FILE: MSMg01no076_b01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:24:55 2005
(418 letters)
>mm_chr17_83345164_83345980
Length = 817
Score = 746 bits (386), Expect = 0.0
Identities = 410/418 (98%), Gaps = 1/418 (0%)
Strand = Plus / Minus
Query: 1 ctagcacgtttttgattggtgtgaagtctggctcaaagaccacaggaggtgggagagcca 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 ctagcacgtttttggttggtgtgaagtctggctcaaagaccacaggaggtgggagagcca 558
Query: 61 aggagaaggatccagtgtccctggtgccctaaacaccatccccacctctgggctgtcccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 557 aggagaaggatccagtgtccctggtgccctaaacaccatccccacctctgggccgtcccc 498
Query: 121 acagggcagaacaagcttcaggctagtttgaggcacagtgctttaacaggcgaaagtact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 acagggcagaacaagcttcaggctagtttgaggcacagtgctttaacaggcgaaagtact 438
Query: 181 cagaaggctggaggacatggagtgcctgggtagctggtgctcaagttcaacatgggtgag 240
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 437 cagaaggctggaggacatggagtgcctgggcagctggtgctcaagttcaacatgggtgag 378
Query: 241 ttttatttggaaaaataataaaacaaaggcgattgctgctttcctgtggcagtgtctttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 ttttatttggaaaaataataaaacaaaggcgattgctgctttcctgtggcagtgtctttg 318
Query: 301 atggttgtattgctggtaggcagcagactgagaacattctttccatatcaaccccccaag 360
|||||||| ||||||||||| |||||||||||||||||||||||||||| |||||||| |
Sbjct: 317 atggttgtgttgctggtaggtagcagactgagaacattctttccatatccacccccca-g 259
Query: 361 agcttgttacttgccgtgggaaaactgacacattcttatacccgtatgttctgttaag 418
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 258 agcttgttacttgccgtgggaaaactgagacattcttatacccgtatgttctgttaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 418
Length of database: 817
Length adjustment: 9
Effective length of query: 409
Effective length of database: 808
Effective search space: 330472
Effective search space used: 330472
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
