Query= MSMg01no078_e06.b1 MSMg01no078_e06.b1 CHROMAT_FILE:
MSMg01no078_e06.b1 PHD_FILE: MSMg01no078_e06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:26:33 2005
(534 letters)
>mm_chr17_87111270_87112204
Length = 935
Score = 511 bits (264), Expect = e-149
Identities = 281/290 (96%), Gaps = 7/290 (2%)
Strand = Plus / Minus
Query: 249 agcatcccgggctacagagaggctgtctctcaaaataaaaccaaaaccaaacacacaaac 308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 agcatcccgggctacagagaggctgtctctcaaaataaaaccaaaaccaaacacacaaac 676
Query: 309 caaccaacttcaagtgccatggagtgtgtttattgtacactatttgtggaaaaggcagag 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 caaccaacttcaagtgccatggagtgtgtttattgtacactatttgtggaaaaggcagag 616
Query: 369 gatgtgtagcatggtgcacactcatagccggcacgtgtg----cacaccgggagactgac 424
|||||||||||||||||||||||||||| |||||||||| |||||||||||||||||
Sbjct: 615 gatgtgtagcatggtgcacactcatagcgggcacgtgtgtgtgcacaccgggagactgac 556
Query: 425 atggggacgtggaggcccatatcagctagtgaaagcacagtttgttttctgttttttaca 484
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 attgggacgtggaggcccatatcagctagtgaaagcacagtttgttttctgttttttaca 496
Query: 485 cttttcttgtatagttcaagttttttttttcctctagcaaacacttgctg 534
|||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 495 cttttcttgtatagttcaagtttttttt---ctctagcaaacacttgctg 449
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 534
Length of database: 935
Length adjustment: 10
Effective length of query: 524
Effective length of database: 925
Effective search space: 484700
Effective search space used: 484700
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no078_e06.g1 MSMg01no078_e06.g1 CHROMAT_FILE:
MSMg01no078_e06.g1 PHD_FILE: MSMg01no078_e06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:26:33 2005
(464 letters)
>mm_chr17_86986417_86987280
Length = 864
Score = 851 bits (440), Expect = 0.0
Identities = 458/464 (98%)
Strand = Plus / Plus
Query: 1 tttgagtgacaatgacagcgggagcatgacagttattattcctctcttacccactgtaaa 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 201 tttgagtgacaatgacagcgggagcatgacagtaattattcctctcttacccactgtaaa 260
Query: 61 cccatgaatccagaagctgtatggctatgctgttcacctccgtcttcgctattgtggatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 261 cccatgaatccagaagctgtatggctatgctgttcacctccgtcttcgctattatggatg 320
Query: 121 cccaagctgggtgaccatgtctcttcacctctgcagctttcaccccagaaatattctaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cccaagctgggtgaccatgtctcttcacctctgcagctttcaccccagaaatattctaga 380
Query: 181 tactatttacttattcattttcgtctacttaattattttcctcttacatctgatttctgg 240
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 381 tactatttacttattcattttcgtctacttaattattttcctcttacgtctgatttctgg 440
Query: 241 atctatagctttggcttaatttgagtaaatcattgtccttgtttggcagacacttttaat 300
||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct: 441 atctatagctttggcttaatttgagtaaatcattgtctttgtttggcagacatttttaat 500
Query: 301 gtcagaacatttgccagtctgagtccttggacccagacaagcaggggaaagacactgaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtcagaacatttgccagtctgagtccttggacccagacaagcaggggaaagacactgaca 560
Query: 361 gaaaaatcctgtagtatttggcacaggttcataggaatagtgggtgcaaagcgaggcttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gaaaaatcctgtagtatttggcacaggttcataggaatagtgggtgcaaagcgaggcttg 620
Query: 421 tcctgtgaggaaacttctgagtttcctgtggtcagggggctttg 464
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ccctgtgaggaaacttctgagtttcctgtggtcagggggctttg 664
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 464
Length of database: 864
Length adjustment: 10
Effective length of query: 454
Effective length of database: 854
Effective search space: 387716
Effective search space used: 387716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
